RNA–Protein interactions for RNA: ENST00000435997.2

SPTLC1P4-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 4, humanhuman

BASIC

Gene SPTLC1P4, Length 260 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P4-201ENST00000435997 SLC30A1Q9Y6M5 507 aa10.81□□□□□ -0.68
SPTLC1P4-201ENST00000435997 GOLGA6L22H0YM25 854 aa10.8□□□□□ -0.68
SPTLC1P4-201ENST00000435997 KCNK1O00180 336 aa10.8□□□□□ -0.68
SPTLC1P4-201ENST00000435997 POLR1CO15160 346 aaPredicted RBP10.8□□□□□ -0.68
SPTLC1P4-201ENST00000435997 PROSCO94903 275 aa10.8□□□□□ -0.68
SPTLC1P4-201ENST00000435997 GYPCP04921 128 aa10.8□□□□□ -0.68
SPTLC1P4-201ENST00000435997 PRKAR1AP10644 381 aa10.8□□□□□ -0.68
SPTLC1P4-201ENST00000435997 ZNF28P17035 718 aa10.8□□□□□ -0.68
SPTLC1P4-201ENST00000435997 XRCC1P18887 633 aaPredicted RBP10.8□□□□□ -0.68
SPTLC1P4-201ENST00000435997 F8A1P23610 371 aa10.8□□□□□ -0.68
SPTLC1P4-201ENST00000435997 CD86P42081 329 aa10.8□□□□□ -0.68
SPTLC1P4-201ENST00000435997 ZBED6P86452 979 aa10.8□□□□□ -0.68
SPTLC1P4-201ENST00000435997 MC1RQ01726 317 aa10.8□□□□□ -0.68
SPTLC1P4-201ENST00000435997 ZNF569Q5MCW4 686 aa10.8□□□□□ -0.68
SPTLC1P4-201ENST00000435997 TMEM26Q6ZUK4 368 aa10.8□□□□□ -0.68
SPTLC1P4-201ENST00000435997 PRSS42Q7Z5A4 293 aa10.8□□□□□ -0.68
SPTLC1P4-201ENST00000435997 VSIG1Q86XK7 387 aa10.8□□□□□ -0.68
SPTLC1P4-201ENST00000435997 ZNF547Q8IVP9 402 aa10.8□□□□□ -0.68
SPTLC1P4-201ENST00000435997 PLD5Q8N7P1 536 aa10.8□□□□□ -0.68
SPTLC1P4-201ENST00000435997 GPR26Q8NDV2 337 aa10.8□□□□□ -0.68
SPTLC1P4-201ENST00000435997 CCHCR1Q8TD31 782 aa10.8□□□□□ -0.68
SPTLC1P4-201ENST00000435997 APOBEC4Q8WW27 367 aaKnown RBP10.8□□□□□ -0.68
SPTLC1P4-201ENST00000435997 OLFM3Q96PB7 478 aa10.8□□□□□ -0.68
SPTLC1P4-201ENST00000435997 ZSCAN5AQ9BUG6 496 aa10.8□□□□□ -0.68
SPTLC1P4-201ENST00000435997 MLPHQ9BV36 600 aaPredicted RBP10.8□□□□□ -0.68
SPTLC1P4-201ENST00000435997 ADGRE3Q9BY15 652 aa10.8□□□□□ -0.68
SPTLC1P4-201ENST00000435997 ZNF768Q9H5H4 540 aaKnown RBP10.8□□□□□ -0.68
SPTLC1P4-201ENST00000435997 ZFYVE1Q9HBF4 777 aa10.8□□□□□ -0.68
SPTLC1P4-201ENST00000435997 TRIM39Q9HCM9 518 aa10.8□□□□□ -0.68
SPTLC1P4-201ENST00000435997 ZNF624Q9P2J8 865 aaPredicted RBP10.8□□□□□ -0.68
SPTLC1P4-201ENST00000435997 ANKMY1Q9P2S6 941 aa10.8□□□□□ -0.68
SPTLC1P4-201ENST00000435997 SLC23A2Q9UGH3 650 aa10.8□□□□□ -0.68
SPTLC1P4-201ENST00000435997 CAPN11Q9UMQ6 739 aa10.8□□□□□ -0.68
SPTLC1P4-201ENST00000435997 LRRK2Q5S007 2527 aa10.8□□□□□ -0.68
SPTLC1P4-201ENST00000435997 C3orf70A6NLC5 250 aaPredicted RBP10.79□□□□□ -0.68
SPTLC1P4-201ENST00000435997 SNX2O60749 519 aa10.79□□□□□ -0.68
SPTLC1P4-201ENST00000435997 UBXN7O94888 489 aa10.79□□□□□ -0.68
SPTLC1P4-201ENST00000435997 KRT7P08729 469 aa10.79□□□□□ -0.68
SPTLC1P4-201ENST00000435997 BRAFP15056 766 aa10.79□□□□□ -0.68
SPTLC1P4-201ENST00000435997 GJC1P36383 396 aa10.79□□□□□ -0.68
SPTLC1P4-201ENST00000435997 MAPK9P45984 424 aa10.79□□□□□ -0.68
SPTLC1P4-201ENST00000435997 CAPZBP47756 277 aa10.79□□□□□ -0.68
SPTLC1P4-201ENST00000435997 GALNT3Q14435 633 aa10.79□□□□□ -0.68
SPTLC1P4-201ENST00000435997 KHDC1Q4VXA5 237 aaKnown RBP10.79□□□□□ -0.68
SPTLC1P4-201ENST00000435997 ZNF648Q5T619 568 aaPredicted RBP10.79□□□□□ -0.68
SPTLC1P4-201ENST00000435997 ATP1A1-AS1Q5TC04 95 aa10.79□□□□□ -0.68
SPTLC1P4-201ENST00000435997 SLC9A4Q6AI14 798 aa10.79□□□□□ -0.68
SPTLC1P4-201ENST00000435997 ABRAXAS1Q6UWZ7 409 aa10.79□□□□□ -0.68
SPTLC1P4-201ENST00000435997 WASH2PQ6VEQ5 465 aa10.79□□□□□ -0.68
SPTLC1P4-201ENST00000435997 TMC3Q7Z5M5 1100 aa10.79□□□□□ -0.68
SPTLC1P4-201ENST00000435997 C11orf96Q7Z7L8 435 aa10.79□□□□□ -0.68
SPTLC1P4-201ENST00000435997 ADGRG6Q86SQ4 1221 aa10.79□□□□□ -0.68
SPTLC1P4-201ENST00000435997 TRAM1L1Q8N609 369 aa10.79□□□□□ -0.68
SPTLC1P4-201ENST00000435997 KCTD6Q8NC69 237 aa10.79□□□□□ -0.68
SPTLC1P4-201ENST00000435997 RAPGEF5Q92565 580 aa10.79□□□□□ -0.68
SPTLC1P4-201ENST00000435997 GLYATL1Q969I3 302 aa10.79□□□□□ -0.68
SPTLC1P4-201ENST00000435997 IQCDQ96DY2 449 aa10.79□□□□□ -0.68
SPTLC1P4-201ENST00000435997 IMP4Q96G21 291 aaKnown RBP10.79□□□□□ -0.68
SPTLC1P4-201ENST00000435997 ABHD17AQ96GS6 310 aa10.79□□□□□ -0.68
SPTLC1P4-201ENST00000435997 RNF157Q96PX1 679 aa10.79□□□□□ -0.68
SPTLC1P4-201ENST00000435997 TIMM29Q9BSF4 260 aa10.79□□□□□ -0.68
SPTLC1P4-201ENST00000435997 ULBP3Q9BZM4 244 aa10.79□□□□□ -0.68
SPTLC1P4-201ENST00000435997 BRD8Q9H0E9 1235 aa10.79□□□□□ -0.68
SPTLC1P4-201ENST00000435997 OR2AG1Q9H205 316 aa10.79□□□□□ -0.68
SPTLC1P4-201ENST00000435997 MAGEE1Q9HCI5 957 aa10.79□□□□□ -0.68
SPTLC1P4-201ENST00000435997 WASH6PQ9NQA3 447 aa10.79□□□□□ -0.68
SPTLC1P4-201ENST00000435997 KLC4Q9NSK0 619 aa10.79□□□□□ -0.68
SPTLC1P4-201ENST00000435997 POT1Q9NUX5 634 aa10.79□□□□□ -0.68
SPTLC1P4-201ENST00000435997 SEMA5BQ9P283 1151 aa10.79□□□□□ -0.68
SPTLC1P4-201ENST00000435997 UVRAGQ9P2Y5 699 aa10.79□□□□□ -0.68
SPTLC1P4-201ENST00000435997 KLHL3Q9UH77 587 aa10.79□□□□□ -0.68
SPTLC1P4-201ENST00000435997 TMPRSS11EQ9UL52 423 aa10.79□□□□□ -0.68
SPTLC1P4-201ENST00000435997 KCTD3Q9Y597 815 aa10.79□□□□□ -0.68
SPTLC1P4-201ENST00000435997 MRPS18BQ9Y676 258 aaKnown RBP10.79□□□□□ -0.68
SPTLC1P4-201ENST00000435997 KCNMB2Q9Y691 235 aa10.79□□□□□ -0.68
SPTLC1P4-201ENST00000435997 RPS6KL1Q9Y6S9 549 aa10.79□□□□□ -0.68
SPTLC1P4-201ENST00000435997 NBASA2RRP1 2371 aa10.79□□□□□ -0.68
SPTLC1P4-201ENST00000435997 DOPEY2Q9Y3R5 2298 aa10.78□□□□□ -0.68
SPTLC1P4-201ENST00000435997 MTA2O94776 668 aa10.78□□□□□ -0.68
SPTLC1P4-201ENST00000435997 SLC25A14O95258 325 aaPredicted RBP10.78□□□□□ -0.68
SPTLC1P4-201ENST00000435997 SERPINC1P01008 464 aa10.78□□□□□ -0.68
SPTLC1P4-201ENST00000435997 JCHAINP01591 159 aa10.78□□□□□ -0.68
SPTLC1P4-201ENST00000435997 TCN2P20062 427 aa10.78□□□□□ -0.68
SPTLC1P4-201ENST00000435997 HNRNPH3P31942 346 aaKnown RBP10.78□□□□□ -0.68
SPTLC1P4-201ENST00000435997 ANP32AP39687 249 aaKnown RBP10.78□□□□□ -0.68
SPTLC1P4-201ENST00000435997 SLC19A1P41440 591 aa10.78□□□□□ -0.68
SPTLC1P4-201ENST00000435997 CD97P48960 835 aa10.78□□□□□ -0.68
SPTLC1P4-201ENST00000435997 SH3BP2P78314 561 aa10.78□□□□□ -0.68
SPTLC1P4-201ENST00000435997 UBAP2LQ14157 1087 aaKnown RBP10.78□□□□□ -0.68
SPTLC1P4-201ENST00000435997 IL11RAQ14626 422 aa10.78□□□□□ -0.68
SPTLC1P4-201ENST00000435997 LACTB2Q53H82 288 aaPredicted RBP10.78□□□□□ -0.68
SPTLC1P4-201ENST00000435997 AGAP9Q5VTM2 703 aa10.78□□□□□ -0.68
SPTLC1P4-201ENST00000435997 ALS2CLQ60I27 953 aa10.78□□□□□ -0.68
SPTLC1P4-201ENST00000435997 CRTC3Q6UUV7 619 aa10.78□□□□□ -0.68
SPTLC1P4-201ENST00000435997 MAP7D3Q8IWC1 876 aa10.78□□□□□ -0.68
SPTLC1P4-201ENST00000435997 RSC1A1Q92681 617 aa10.78□□□□□ -0.68
SPTLC1P4-201ENST00000435997 VPS35Q96QK1 796 aa10.78□□□□□ -0.68
SPTLC1P4-201ENST00000435997 SPATA16Q9BXB7 569 aa10.78□□□□□ -0.68
SPTLC1P4-201ENST00000435997 PACSIN1Q9BY11 444 aa10.78□□□□□ -0.68
SPTLC1P4-201ENST00000435997 RAB33BQ9H082 229 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms