RNA–Protein interactions for RNA: ENST00000433369.6

PTPN12-205, Transcript of protein tyrosine phosphatase, non-receptor type 12, human

TSL 5

Gene PTPN12, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN12-205	ENST00000433369	CCDC187	A0A096LP49	1063 aa		12.49	□□□□□ -0.41
PTPN12-205	ENST00000433369	CDRT15L2	A8MXV6	281 aa		12.49	□□□□□ -0.41
PTPN12-205	ENST00000433369	MIF4GD	A9UHW6	222 aa	Known RBP	12.49	□□□□□ -0.41
PTPN12-205	ENST00000433369	CHUK	O15111	745 aa		12.49	□□□□□ -0.41
PTPN12-205	ENST00000433369	SNX2	O60749	519 aa		12.49	□□□□□ -0.41
PTPN12-205	ENST00000433369	METTL18	O95568	372 aa		12.49	□□□□□ -0.41
PTPN12-205	ENST00000433369	ITIH1	P19827	911 aa		12.49	□□□□□ -0.41
PTPN12-205	ENST00000433369	CCKBR	P32239	447 aa		12.49	□□□□□ -0.41
PTPN12-205	ENST00000433369	ETV5	P41161	510 aa		12.49	□□□□□ -0.41
PTPN12-205	ENST00000433369	GEM	P55040	296 aa		12.49	□□□□□ -0.41
PTPN12-205	ENST00000433369	LRP8	Q14114	963 aa		12.49	□□□□□ -0.41
PTPN12-205	ENST00000433369	DENND5A	Q6IQ26	1287 aa		12.49	□□□□□ -0.41
PTPN12-205	ENST00000433369	IGF2-AS	Q6U949	168 aa		12.49	□□□□□ -0.41
PTPN12-205	ENST00000433369	GLT6D1	Q7Z4J2	308 aa		12.49	□□□□□ -0.41
PTPN12-205	ENST00000433369	SPACA3	Q8IXA5	215 aa		12.49	□□□□□ -0.41
PTPN12-205	ENST00000433369	SYCE1	Q8N0S2	351 aa		12.49	□□□□□ -0.41
PTPN12-205	ENST00000433369	UBL4B	Q8N7F7	174 aa		12.49	□□□□□ -0.41
PTPN12-205	ENST00000433369	FAM71D	Q8N9W8	422 aa		12.49	□□□□□ -0.41
PTPN12-205	ENST00000433369	WDR36	Q8NI36	951 aa	Known RBP	12.49	□□□□□ -0.41
PTPN12-205	ENST00000433369	NAT14	Q8WUY8	206 aa		12.49	□□□□□ -0.41
PTPN12-205	ENST00000433369	ATG4A	Q8WYN0	398 aa		12.49	□□□□□ -0.41
PTPN12-205	ENST00000433369	GRAMD1A	Q96CP6	724 aa		12.49	□□□□□ -0.41
PTPN12-205	ENST00000433369	ZNF578	Q96N58	590 aa	Predicted RBP	12.49	□□□□□ -0.41
PTPN12-205	ENST00000433369	PLEKHG4B	Q96PX9	1271 aa		12.49	□□□□□ -0.41
PTPN12-205	ENST00000433369	FSD1L	Q9BXM9	530 aa		12.49	□□□□□ -0.41
PTPN12-205	ENST00000433369	TRABD	Q9H4I3	376 aa		12.49	□□□□□ -0.41
PTPN12-205	ENST00000433369	RMI1	Q9H9A7	625 aa		12.49	□□□□□ -0.41
PTPN12-205	ENST00000433369	PRDM8	Q9NQV8	689 aa		12.49	□□□□□ -0.41
PTPN12-205	ENST00000433369	SCHIP1	Q9P0W5	487 aa	Predicted RBP	12.49	□□□□□ -0.41
PTPN12-205	ENST00000433369	PCDHGA8	Q9Y5G5	932 aa		12.49	□□□□□ -0.41
PTPN12-205	ENST00000433369	PIKFYVE	Q9Y2I7	2098 aa		12.49	□□□□□ -0.41
PTPN12-205	ENST00000433369	SDK2	Q58EX2	2172 aa		12.48	□□□□□ -0.41
PTPN12-205	ENST00000433369	IGHV1OR21-1	A0A087WYE8	117 aa		12.48	□□□□□ -0.41
PTPN12-205	ENST00000433369	PRR19	A6NJB7	356 aa		12.48	□□□□□ -0.41
PTPN12-205	ENST00000433369	PLD2	O14939	933 aa		12.48	□□□□□ -0.41
PTPN12-205	ENST00000433369	ANXA9	O76027	345 aa		12.48	□□□□□ -0.41
PTPN12-205	ENST00000433369	TNFSF15	O95150	251 aa		12.48	□□□□□ -0.41
PTPN12-205	ENST00000433369	MPST	P25325	297 aa		12.48	□□□□□ -0.41
PTPN12-205	ENST00000433369	SPAM1	P38567	509 aa		12.48	□□□□□ -0.41
PTPN12-205	ENST00000433369	ABCG1	P45844	678 aa		12.48	□□□□□ -0.41
PTPN12-205	ENST00000433369	GSDMD	P57764	484 aa		12.48	□□□□□ -0.41
PTPN12-205	ENST00000433369	ERVPABLB-1	P60509	514 aa		12.48	□□□□□ -0.41
PTPN12-205	ENST00000433369	C16orf72	Q14CZ0	275 aa		12.48	□□□□□ -0.41
PTPN12-205	ENST00000433369	MAP9	Q49MG5	647 aa		12.48	□□□□□ -0.41
PTPN12-205	ENST00000433369	CHCHD2P9	Q5T1J5	151 aa	Predicted RBP	12.48	□□□□□ -0.41
PTPN12-205	ENST00000433369	KCTD11	Q693B1	232 aa		12.48	□□□□□ -0.41
PTPN12-205	ENST00000433369	PDPK2P	Q6A1A2	396 aa		12.48	□□□□□ -0.41
PTPN12-205	ENST00000433369	ITPRIPL1	Q6GPH6	555 aa		12.48	□□□□□ -0.41
PTPN12-205	ENST00000433369	IYD	Q6PHW0	289 aa		12.48	□□□□□ -0.41
PTPN12-205	ENST00000433369	RAB11FIP2	Q7L804	512 aa		12.48	□□□□□ -0.41
PTPN12-205	ENST00000433369	C11orf96	Q7Z7L8	435 aa		12.48	□□□□□ -0.41
PTPN12-205	ENST00000433369	PDZD3	Q86UT5	571 aa		12.48	□□□□□ -0.41
PTPN12-205	ENST00000433369	PHYKPL	Q8IUZ5	450 aa		12.48	□□□□□ -0.41
PTPN12-205	ENST00000433369	KLHDC8B	Q8IXV7	354 aa		12.48	□□□□□ -0.41
PTPN12-205	ENST00000433369	FBXO39	Q8N4B4	442 aa		12.48	□□□□□ -0.41
PTPN12-205	ENST00000433369	TAB3	Q8N5C8	712 aa	Predicted RBP	12.48	□□□□□ -0.41
PTPN12-205	ENST00000433369	RNF10	Q8N5U6	811 aa	Known RBP	12.48	□□□□□ -0.41
PTPN12-205	ENST00000433369	RCBTB1	Q8NDN9	531 aa		12.48	□□□□□ -0.41
PTPN12-205	ENST00000433369	SLC35B2	Q8TB61	432 aa		12.48	□□□□□ -0.41
PTPN12-205	ENST00000433369	CCDC97	Q96F63	343 aa	Predicted RBP	12.48	□□□□□ -0.41
PTPN12-205	ENST00000433369	TMEM74	Q96NL1	305 aa		12.48	□□□□□ -0.41
PTPN12-205	ENST00000433369	VPS35	Q96QK1	796 aa		12.48	□□□□□ -0.41
PTPN12-205	ENST00000433369	SRPK1	Q96SB4	655 aa	Known RBP	12.48	□□□□□ -0.41
PTPN12-205	ENST00000433369	TMEM121	Q9BTD3	319 aa		12.48	□□□□□ -0.41
PTPN12-205	ENST00000433369	RAD18	Q9NS91	495 aa		12.48	□□□□□ -0.41
PTPN12-205	ENST00000433369	KLC4	Q9NSK0	619 aa		12.48	□□□□□ -0.41
PTPN12-205	ENST00000433369	PRAMEF33	A0A0G2JMD5	474 aa		12.47	□□□□□ -0.41
PTPN12-205	ENST00000433369	IGHV5-10-1	A0A0J9YXX1	117 aa		12.47	□□□□□ -0.41
PTPN12-205	ENST00000433369	C5orf60	A6NFR6	353 aa		12.47	□□□□□ -0.41
PTPN12-205	ENST00000433369	CDK14	O94921	469 aa		12.47	□□□□□ -0.41
PTPN12-205	ENST00000433369	CPNE6	O95741	557 aa		12.47	□□□□□ -0.41
PTPN12-205	ENST00000433369	ZNF7	P17097	686 aa	Predicted RBP	12.47	□□□□□ -0.41
PTPN12-205	ENST00000433369	RBMS1	P29558	406 aa	Known RBP	12.47	□□□□□ -0.41
PTPN12-205	ENST00000433369	CETN2	P41208	172 aa		12.47	□□□□□ -0.41
PTPN12-205	ENST00000433369	GPR3	P46089	330 aa		12.47	□□□□□ -0.41
PTPN12-205	ENST00000433369	FASLG	P48023	281 aa		12.47	□□□□□ -0.41
PTPN12-205	ENST00000433369	CTSC	P53634	463 aa		12.47	□□□□□ -0.41
PTPN12-205	ENST00000433369	PCBP4	P57723	403 aa	Known RBP	12.47	□□□□□ -0.41
PTPN12-205	ENST00000433369	CCZ1B	P86790	482 aa		12.47	□□□□□ -0.41
PTPN12-205	ENST00000433369	CCZ1	P86791	482 aa	Predicted RBP	12.47	□□□□□ -0.41
PTPN12-205	ENST00000433369	TLE3	Q04726	772 aa		12.47	□□□□□ -0.41
PTPN12-205	ENST00000433369	TMEM115	Q12893	351 aa	Predicted RBP	12.47	□□□□□ -0.41
PTPN12-205	ENST00000433369	NFATC2	Q13469	925 aa		12.47	□□□□□ -0.41
PTPN12-205	ENST00000433369	PHF19	Q5T6S3	580 aa		12.47	□□□□□ -0.41
PTPN12-205	ENST00000433369	CLEC14A	Q86T13	490 aa		12.47	□□□□□ -0.41
PTPN12-205	ENST00000433369	PRUNE1	Q86TP1	453 aa		12.47	□□□□□ -0.41
PTPN12-205	ENST00000433369	PIM3	Q86V86	326 aa		12.47	□□□□□ -0.41
PTPN12-205	ENST00000433369	LRRTM4	Q86VH4	590 aa		12.47	□□□□□ -0.41
PTPN12-205	ENST00000433369	LSMEM2	Q8N112	164 aa		12.47	□□□□□ -0.41
PTPN12-205	ENST00000433369	RASGEF1A	Q8N9B8	481 aa		12.47	□□□□□ -0.41
PTPN12-205	ENST00000433369	OR4K2	Q8NGD2	314 aa		12.47	□□□□□ -0.41
PTPN12-205	ENST00000433369	OR13C4	Q8NGS5	318 aa		12.47	□□□□□ -0.41
PTPN12-205	ENST00000433369	OSGEPL1	Q9H4B0	414 aa		12.47	□□□□□ -0.41
PTPN12-205	ENST00000433369	THSD1	Q9NS62	852 aa		12.47	□□□□□ -0.41
PTPN12-205	ENST00000433369	HACD3	Q9P035	362 aa		12.47	□□□□□ -0.41
PTPN12-205	ENST00000433369	PISD	Q9UG56	409 aa		12.47	□□□□□ -0.41
PTPN12-205	ENST00000433369	FKBPL	Q9UIM3	349 aa		12.47	□□□□□ -0.41
PTPN12-205	ENST00000433369	DNAJC16	Q9Y2G8	782 aa		12.47	□□□□□ -0.41
PTPN12-205	ENST00000433369	LOXL2	Q9Y4K0	774 aa		12.47	□□□□□ -0.41
PTPN12-205	ENST00000433369	GLYATL1P3	A0A0U1RQE8	302 aa		12.46	□□□□□ -0.41

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