RNA–Protein interactions for RNA: ENST00000428626.5

SEC13-210, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-210ENST00000428626 DCDC1P59894 354 aa15.32■□□□□ 0.04
SEC13-210ENST00000428626 CDK18Q07002 472 aa15.32■□□□□ 0.04
SEC13-210ENST00000428626 PDK1Q15118 436 aa15.32■□□□□ 0.04
SEC13-210ENST00000428626 PLA2G4EQ3MJ16 856 aa15.32■□□□□ 0.04
SEC13-210ENST00000428626 ZNF569Q5MCW4 686 aa15.32■□□□□ 0.04
SEC13-210ENST00000428626 TIPARPQ7Z3E1 657 aaKnown RBP15.32■□□□□ 0.04
SEC13-210ENST00000428626 RFX6Q8HWS3 928 aa15.32■□□□□ 0.04
SEC13-210ENST00000428626 ZNF547Q8IVP9 402 aa15.32■□□□□ 0.04
SEC13-210ENST00000428626 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.32■□□□□ 0.04
SEC13-210ENST00000428626 GLYATL1Q969I3 302 aa15.32■□□□□ 0.04
SEC13-210ENST00000428626 RNF31Q96EP0 1072 aa15.32■□□□□ 0.04
SEC13-210ENST00000428626 HERPUD2Q9BSE4 406 aa15.32■□□□□ 0.04
SEC13-210ENST00000428626 GOLPH3Q9H4A6 298 aa15.32■□□□□ 0.04
SEC13-210ENST00000428626 GLOD4Q9HC38 313 aa15.32■□□□□ 0.04
SEC13-210ENST00000428626 TRIM39Q9HCM9 518 aa15.32■□□□□ 0.04
SEC13-210ENST00000428626 NFKBIL1Q9UBC1 381 aaPredicted RBP15.32■□□□□ 0.04
SEC13-210ENST00000428626 CPNE7Q9UBL6 633 aa15.32■□□□□ 0.04
SEC13-210ENST00000428626 KLHL3Q9UH77 587 aa15.32■□□□□ 0.04
SEC13-210ENST00000428626 SLC30A1Q9Y6M5 507 aa15.32■□□□□ 0.04
SEC13-210ENST00000428626 KIR2DS5A0A0G2JLQ3 304 aa15.31■□□□□ 0.04
SEC13-210ENST00000428626 A0A0G2JNG1 304 aa15.31■□□□□ 0.04
SEC13-210ENST00000428626 KIR2DS3K7RE56 304 aa15.31■□□□□ 0.04
SEC13-210ENST00000428626 PMPCBO75439 489 aa15.31■□□□□ 0.04
SEC13-210ENST00000428626 SLC25A14O95258 325 aaPredicted RBP15.31■□□□□ 0.04
SEC13-210ENST00000428626 BRAFP15056 766 aa15.31■□□□□ 0.04
SEC13-210ENST00000428626 SLC19A1P41440 591 aa15.31■□□□□ 0.04
SEC13-210ENST00000428626 CDKN2BP42772 138 aa15.31■□□□□ 0.04
SEC13-210ENST00000428626 CLCNKAP51800 687 aa15.31■□□□□ 0.04
SEC13-210ENST00000428626 GFERP55789 205 aa15.31■□□□□ 0.04
SEC13-210ENST00000428626 MC2RQ01718 297 aa15.31■□□□□ 0.04
SEC13-210ENST00000428626 WASHC5Q12768 1159 aa15.31■□□□□ 0.04
SEC13-210ENST00000428626 TRIM14Q14142 442 aa15.31■□□□□ 0.04
SEC13-210ENST00000428626 KIR2DS5Q14953 304 aa15.31■□□□□ 0.04
SEC13-210ENST00000428626 PRKD1Q15139 912 aaPredicted RBP15.31■□□□□ 0.04
SEC13-210ENST00000428626 TAZQ16635 292 aa15.31■□□□□ 0.04
SEC13-210ENST00000428626 TEX44Q53QW1 395 aa15.31■□□□□ 0.04
SEC13-210ENST00000428626 DCAF12Q5T6F0 453 aa15.31■□□□□ 0.04
SEC13-210ENST00000428626 LRRC38Q5VT99 294 aa15.31■□□□□ 0.04
SEC13-210ENST00000428626 SLC9B2Q86UD5 537 aa15.31■□□□□ 0.04
SEC13-210ENST00000428626 CACNA2D3Q8IZS8 1091 aa15.31■□□□□ 0.04
SEC13-210ENST00000428626 TRAM1L1Q8N609 369 aa15.31■□□□□ 0.04
SEC13-210ENST00000428626 ARHGAP9Q9BRR9 750 aa15.31■□□□□ 0.04
SEC13-210ENST00000428626 TRIM4Q9C037 500 aa15.31■□□□□ 0.04
SEC13-210ENST00000428626 ZMYND15Q9H091 742 aa15.31■□□□□ 0.04
SEC13-210ENST00000428626 BPIFA1Q9NP55 256 aa15.31■□□□□ 0.04
SEC13-210ENST00000428626 ZNF624Q9P2J8 865 aaPredicted RBP15.31■□□□□ 0.04
SEC13-210ENST00000428626 HECTD1Q9ULT8 2610 aa15.31■□□□□ 0.04
SEC13-210ENST00000428626 LOC101059948A0A1B0GTJ6 334 aa15.3■□□□□ 0.04
SEC13-210ENST00000428626 LILRA5A6NI73 299 aa15.3■□□□□ 0.04
SEC13-210ENST00000428626 PPP1R12AO14974 1030 aaPredicted RBP15.3■□□□□ 0.04
SEC13-210ENST00000428626 NDST3O95803 873 aa15.3■□□□□ 0.04
SEC13-210ENST00000428626 COMTP21964 271 aa15.3■□□□□ 0.04
SEC13-210ENST00000428626 PPM1FP49593 454 aaPredicted RBP15.3■□□□□ 0.04
SEC13-210ENST00000428626 ATP1A2P50993 1020 aa15.3■□□□□ 0.04
SEC13-210ENST00000428626 EPHA4P54764 986 aa15.3■□□□□ 0.04
SEC13-210ENST00000428626 MN1Q10571 1320 aaPredicted RBP15.3■□□□□ 0.04
SEC13-210ENST00000428626 SLC14A2Q15849 920 aa15.3■□□□□ 0.04
SEC13-210ENST00000428626 KDELC1Q6UW63 502 aa15.3■□□□□ 0.04
SEC13-210ENST00000428626 PRICKLE2Q7Z3G6 844 aa15.3■□□□□ 0.04
SEC13-210ENST00000428626 C11orf96Q7Z7L8 435 aa15.3■□□□□ 0.04
SEC13-210ENST00000428626 RHOT2Q8IXI1 618 aa15.3■□□□□ 0.04
SEC13-210ENST00000428626 UNC5BQ8IZJ1 945 aa15.3■□□□□ 0.04
SEC13-210ENST00000428626 IL22RA1Q8N6P7 574 aa15.3■□□□□ 0.04
SEC13-210ENST00000428626 ZSCAN1Q8NBB4 408 aa15.3■□□□□ 0.04
SEC13-210ENST00000428626 CCDC112Q8NEF3 446 aa15.3■□□□□ 0.04
SEC13-210ENST00000428626 TEKT5Q96M29 485 aa15.3■□□□□ 0.04
SEC13-210ENST00000428626 CCDC42Q96M95 316 aa15.3■□□□□ 0.04
SEC13-210ENST00000428626 ZSCAN5AQ9BUG6 496 aa15.3■□□□□ 0.04
SEC13-210ENST00000428626 MAK16Q9BXY0 300 aaKnown RBP15.3■□□□□ 0.04
SEC13-210ENST00000428626 ASPSCR1Q9BZE9 553 aa15.3■□□□□ 0.04
SEC13-210ENST00000428626 GPR63Q9BZJ6 419 aa15.3■□□□□ 0.04
SEC13-210ENST00000428626 OSGEPL1Q9H4B0 414 aa15.3■□□□□ 0.04
SEC13-210ENST00000428626 SIDT1Q9NXL6 827 aaKnown RBP15.3■□□□□ 0.04
SEC13-210ENST00000428626 DNAJC16Q9Y2G8 782 aa15.3■□□□□ 0.04
SEC13-210ENST00000428626 ZNF106Q9H2Y7 1883 aaKnown RBP15.29■□□□□ 0.04
SEC13-210ENST00000428626 F5H423 210 aaPredicted RBP15.29■□□□□ 0.04
SEC13-210ENST00000428626 GPR39O43194 453 aa15.29■□□□□ 0.04
SEC13-210ENST00000428626 TPM3P06753 285 aa15.29■□□□□ 0.04
SEC13-210ENST00000428626 ZFXP17010 805 aaPredicted RBP15.29■□□□□ 0.04
SEC13-210ENST00000428626 ZNF7P17097 686 aaPredicted RBP15.29■□□□□ 0.04
SEC13-210ENST00000428626 XRCC1P18887 633 aaPredicted RBP15.29■□□□□ 0.04
SEC13-210ENST00000428626 CHRNA4P43681 627 aa15.29■□□□□ 0.04
SEC13-210ENST00000428626 MARCKSL1P49006 195 aa15.29■□□□□ 0.04
SEC13-210ENST00000428626 RAB15P59190 212 aa15.29■□□□□ 0.04
SEC13-210ENST00000428626 TCEAL1Q15170 157 aa15.29■□□□□ 0.04
SEC13-210ENST00000428626 SEPT7Q16181 437 aaKnown RBP15.29■□□□□ 0.04
SEC13-210ENST00000428626 ATP13A5Q4VNC0 1218 aa15.29■□□□□ 0.04
SEC13-210ENST00000428626 XKR5Q6UX68 686 aa15.29■□□□□ 0.04
SEC13-210ENST00000428626 PHYKPLQ8IUZ5 450 aa15.29■□□□□ 0.04
SEC13-210ENST00000428626 RHOT1Q8IXI2 618 aa15.29■□□□□ 0.04
SEC13-210ENST00000428626 TTC30BQ8N4P2 665 aa15.29■□□□□ 0.04
SEC13-210ENST00000428626 SH3KBP1Q96B97 665 aa15.29■□□□□ 0.04
SEC13-210ENST00000428626 OXNAD1Q96HP4 312 aaPredicted RBP15.29■□□□□ 0.04
SEC13-210ENST00000428626 FBXO8Q9NRD0 319 aa15.29■□□□□ 0.04
SEC13-210ENST00000428626 ZNHIT6Q9NWK9 470 aaKnown RBP15.29■□□□□ 0.04
SEC13-210ENST00000428626 IL17BQ9UHF5 180 aa15.29■□□□□ 0.04
SEC13-210ENST00000428626 TFR2Q9UP52 801 aa15.29■□□□□ 0.04
SEC13-210ENST00000428626 UBR5O95071 2799 aaPredicted RBP15.28■□□□□ 0.04
SEC13-210ENST00000428626 A0A0A6YYK5 440 aaPredicted RBP15.28■□□□□ 0.04
SEC13-210ENST00000428626 LOC285095A0A1B0GVY8 99 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms