RNA–Protein interactions for RNA: ENST00000428287.6

RIF1-203, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-203ENST00000428287 PLCL1Q15111 1095 aa5.11□□□□□ -1.59
RIF1-203ENST00000428287 CTU2Q2VPK5 515 aaKnown RBP5.11□□□□□ -1.59
RIF1-203ENST00000428287 ARHGAP17Q68EM7 881 aa5.11□□□□□ -1.59
RIF1-203ENST00000428287 SULT1C3Q6IMI6 304 aa5.11□□□□□ -1.59
RIF1-203ENST00000428287 ZBTB46Q86UZ6 589 aa5.11□□□□□ -1.59
RIF1-203ENST00000428287 RFX6Q8HWS3 928 aa5.11□□□□□ -1.59
RIF1-203ENST00000428287 COLGALT1Q8NBJ5 622 aa5.11□□□□□ -1.59
RIF1-203ENST00000428287 GALNT11Q8NCW6 608 aa5.11□□□□□ -1.59
RIF1-203ENST00000428287 MCFD2Q8NI22 146 aa5.11□□□□□ -1.59
RIF1-203ENST00000428287 ACER1Q8TDN7 264 aa5.11□□□□□ -1.59
RIF1-203ENST00000428287 PEX13Q92968 403 aa5.11□□□□□ -1.59
RIF1-203ENST00000428287 FAM49AQ9H0Q0 323 aaPredicted RBP5.11□□□□□ -1.59
RIF1-203ENST00000428287 CSNK1G3Q9Y6M4 447 aa5.11□□□□□ -1.59
RIF1-203ENST00000428287 PPEF1O14829 653 aaPredicted RBP5.1□□□□□ -1.59
RIF1-203ENST00000428287 SLC7A4O43246 635 aa5.1□□□□□ -1.59
RIF1-203ENST00000428287 SEC24AO95486 1093 aa5.1□□□□□ -1.59
RIF1-203ENST00000428287 GSNP06396 782 aa5.1□□□□□ -1.59
RIF1-203ENST00000428287 CYP2B6P20813 491 aa5.1□□□□□ -1.59
RIF1-203ENST00000428287 ZNF135P52742 658 aaPredicted RBP5.1□□□□□ -1.59
RIF1-203ENST00000428287 RAB10P61026 200 aa5.1□□□□□ -1.59
RIF1-203ENST00000428287 RIN1Q13671 783 aa5.1□□□□□ -1.59
RIF1-203ENST00000428287 RAB6CQ53S08 254 aa5.1□□□□□ -1.59
RIF1-203ENST00000428287 Q5BKY6 102 aa5.1□□□□□ -1.59
RIF1-203ENST00000428287 CPZQ66K79 652 aa5.1□□□□□ -1.59
RIF1-203ENST00000428287 REP15Q6BDI9 236 aa5.1□□□□□ -1.59
RIF1-203ENST00000428287 CASC4Q6P4E1 433 aa5.1□□□□□ -1.59
RIF1-203ENST00000428287 ISCA2Q86U28 154 aa5.1□□□□□ -1.59
RIF1-203ENST00000428287 CCDC190Q86UF4 302 aa5.1□□□□□ -1.59
RIF1-203ENST00000428287 CLIP4Q8N3C7 705 aa5.1□□□□□ -1.59
RIF1-203ENST00000428287 TMEM176AQ96HP8 235 aa5.1□□□□□ -1.59
RIF1-203ENST00000428287 CPB2Q96IY4 423 aa5.1□□□□□ -1.59
RIF1-203ENST00000428287 RAB6CQ9H0N0 254 aa5.1□□□□□ -1.59
RIF1-203ENST00000428287 SLA2Q9H6Q3 261 aa5.1□□□□□ -1.59
RIF1-203ENST00000428287 SYNDIG1Q9H7V2 258 aa5.1□□□□□ -1.59
RIF1-203ENST00000428287 THADAQ6YHU6 1953 aa5.1□□□□□ -1.59
RIF1-203ENST00000428287 FREM2Q5SZK8 3169 aa5.1□□□□□ -1.59
RIF1-203ENST00000428287 A0A0J9YYE9 177 aa5.1□□□□□ -1.59
RIF1-203ENST00000428287 PRMT5O14744 637 aaPredicted RBP5.1□□□□□ -1.59
RIF1-203ENST00000428287 DCLK1O15075 740 aa5.1□□□□□ -1.59
RIF1-203ENST00000428287 TBC1D4O60343 1298 aa5.1□□□□□ -1.59
RIF1-203ENST00000428287 EEF1DP29692 281 aaKnown RBP5.1□□□□□ -1.59
RIF1-203ENST00000428287 DDOSTP39656 456 aa5.1□□□□□ -1.59
RIF1-203ENST00000428287 CSNK2BP67870 215 aa5.1□□□□□ -1.59
RIF1-203ENST00000428287 ZNF699Q32M78 642 aa5.1□□□□□ -1.59
RIF1-203ENST00000428287 DACT2Q5SW24 774 aa5.1□□□□□ -1.59
RIF1-203ENST00000428287 NCBP2-AS2Q69YL0 99 aa5.1□□□□□ -1.59
RIF1-203ENST00000428287 TAS2R42Q7RTR8 314 aa5.1□□□□□ -1.59
RIF1-203ENST00000428287 FAM83AQ86UY5 434 aa5.1□□□□□ -1.59
RIF1-203ENST00000428287 HID1Q8IV36 788 aa5.1□□□□□ -1.59
RIF1-203ENST00000428287 SLC7A6Q92536 515 aa5.1□□□□□ -1.59
RIF1-203ENST00000428287 SLC39A13Q96H72 371 aa5.1□□□□□ -1.59
RIF1-203ENST00000428287 ASPSCR1Q9BZE9 553 aa5.1□□□□□ -1.59
RIF1-203ENST00000428287 TRIM15Q9C019 465 aa5.1□□□□□ -1.59
RIF1-203ENST00000428287 ASB7Q9H672 318 aa5.1□□□□□ -1.59
RIF1-203ENST00000428287 C3orf14Q9HBI5 128 aa5.1□□□□□ -1.59
RIF1-203ENST00000428287 TMEM233B4DJY2 109 aa5.1□□□□□ -1.59
RIF1-203ENST00000428287 NEMP1O14524 444 aa5.1□□□□□ -1.59
RIF1-203ENST00000428287 TBX1O43435 398 aa5.1□□□□□ -1.59
RIF1-203ENST00000428287 TLL1O43897 1013 aa5.1□□□□□ -1.59
RIF1-203ENST00000428287 MAP3K6O95382 1288 aa5.1□□□□□ -1.59
RIF1-203ENST00000428287 ASNSP08243 561 aa5.1□□□□□ -1.59
RIF1-203ENST00000428287 RAP2AP10114 183 aa5.1□□□□□ -1.59
RIF1-203ENST00000428287 CYP2C8P10632 490 aa5.1□□□□□ -1.59
RIF1-203ENST00000428287 RAD23AP54725 363 aa5.1□□□□□ -1.59
RIF1-203ENST00000428287 CDH8P55286 799 aa5.1□□□□□ -1.59
RIF1-203ENST00000428287 COPZ1P61923 177 aa5.1□□□□□ -1.59
RIF1-203ENST00000428287 PPP1R3AQ16821 1122 aa5.1□□□□□ -1.59
RIF1-203ENST00000428287 PARP15Q460N3 678 aa5.1□□□□□ -1.59
RIF1-203ENST00000428287 GJC2Q5T442 439 aaPredicted RBP5.1□□□□□ -1.59
RIF1-203ENST00000428287 UBE2UQ5VVX9 321 aa5.1□□□□□ -1.59
RIF1-203ENST00000428287 RANBP10Q6VN20 620 aa5.1□□□□□ -1.59
RIF1-203ENST00000428287 ELMOD2Q8IZ81 293 aa5.1□□□□□ -1.59
RIF1-203ENST00000428287 DNERQ8NFT8 737 aa5.1□□□□□ -1.59
RIF1-203ENST00000428287 FCGR1BQ92637 280 aa5.1□□□□□ -1.59
RIF1-203ENST00000428287 HSFY1Q96LI6 401 aa5.1□□□□□ -1.59
RIF1-203ENST00000428287 C3orf30Q96M34 536 aa5.1□□□□□ -1.59
RIF1-203ENST00000428287 OR2A14Q96R47 310 aa5.1□□□□□ -1.59
RIF1-203ENST00000428287 RBM4BQ9BQ04 359 aaKnown RBP5.1□□□□□ -1.59
RIF1-203ENST00000428287 RBM4Q9BWF3 364 aaKnown RBP5.1□□□□□ -1.59
RIF1-203ENST00000428287 ALOXE3Q9BYJ1 711 aa5.1□□□□□ -1.59
RIF1-203ENST00000428287 TAS2R9Q9NYW1 312 aa5.1□□□□□ -1.59
RIF1-203ENST00000428287 TLK1Q9UKI8 766 aa5.1□□□□□ -1.59
RIF1-203ENST00000428287 TRPC5Q9UL62 973 aaPredicted RBP5.1□□□□□ -1.59
RIF1-203ENST00000428287 SATB2Q9UPW6 733 aa5.1□□□□□ -1.59
RIF1-203ENST00000428287 MAFBQ9Y5Q3 323 aaPredicted RBP5.1□□□□□ -1.59
RIF1-203ENST00000428287 MUSKO15146 869 aa5.1□□□□□ -1.59
RIF1-203ENST00000428287 ASNA1O43681 348 aa5.1□□□□□ -1.59
RIF1-203ENST00000428287 EDN1P05305 212 aa5.1□□□□□ -1.59
RIF1-203ENST00000428287 ATICP31939 592 aa5.1□□□□□ -1.59
RIF1-203ENST00000428287 ETV3P41162 512 aa5.1□□□□□ -1.59
RIF1-203ENST00000428287 HUNKP57058 714 aa5.1□□□□□ -1.59
RIF1-203ENST00000428287 TNK1Q13470 666 aa5.1□□□□□ -1.59
RIF1-203ENST00000428287 DESI1Q6ICB0 168 aa5.1□□□□□ -1.59
RIF1-203ENST00000428287 DLEU7Q6UYE1 221 aa5.1□□□□□ -1.59
RIF1-203ENST00000428287 SPATC1Q76KD6 591 aa5.1□□□□□ -1.59
RIF1-203ENST00000428287 P2RY8Q86VZ1 359 aa5.1□□□□□ -1.59
RIF1-203ENST00000428287 ZMIZ2Q8NF64 920 aa5.1□□□□□ -1.59
RIF1-203ENST00000428287 FLCNQ8NFG4 579 aa5.1□□□□□ -1.59
RIF1-203ENST00000428287 C19orf60Q96EN9 201 aa5.1□□□□□ -1.59
RIF1-203ENST00000428287 PDLIM5Q96HC4 596 aaKnown RBP5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms