RNA–Protein interactions for RNA: ENST00000425048.1

LINC01040-201, Transcript of long intergenic non-protein coding RNA 1040, humanhuman

TSL 2 BASIC

Gene LINC01040, Length 666 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01040-201ENST00000425048 TYMPP19971 482 aa4.2□□□□□ -1.74
LINC01040-201ENST00000425048 MCCP23508 829 aa4.2□□□□□ -1.74
LINC01040-201ENST00000425048 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.2□□□□□ -1.74
LINC01040-201ENST00000425048 DRAP1Q14919 205 aaPredicted RBP4.2□□□□□ -1.74
LINC01040-201ENST00000425048 BMPERQ8N8U9 685 aa4.2□□□□□ -1.74
LINC01040-201ENST00000425048 CCT6BQ92526 530 aa4.2□□□□□ -1.74
LINC01040-201ENST00000425048 LBHD1Q9BQE6 289 aaPredicted RBP4.2□□□□□ -1.74
LINC01040-201ENST00000425048 TRPC7Q9HCX4 862 aa4.2□□□□□ -1.74
LINC01040-201ENST00000425048 HSF4Q9ULV5 492 aa4.2□□□□□ -1.74
LINC01040-201ENST00000425048 STK36Q9NRP7 1315 aa4.2□□□□□ -1.74
LINC01040-201ENST00000425048 NOTCH2Q04721 2471 aa4.19□□□□□ -1.74
LINC01040-201ENST00000425048 SRSF10O75494 262 aaKnown RBP4.19□□□□□ -1.74
LINC01040-201ENST00000425048 TFAP2AP05549 437 aa4.19□□□□□ -1.74
LINC01040-201ENST00000425048 HOXC9P31274 260 aa4.19□□□□□ -1.74
LINC01040-201ENST00000425048 CDAP32320 146 aa4.19□□□□□ -1.74
LINC01040-201ENST00000425048 RPP30P78346 268 aaKnown RBP4.19□□□□□ -1.74
LINC01040-201ENST00000425048 ZNF613Q6PF04 617 aa4.19□□□□□ -1.74
LINC01040-201ENST00000425048 CCDC146Q8IYE0 955 aa4.19□□□□□ -1.74
LINC01040-201ENST00000425048 KLHL29Q96CT2 875 aa4.19□□□□□ -1.74
LINC01040-201ENST00000425048 HARBI1Q96MB7 349 aa4.19□□□□□ -1.74
LINC01040-201ENST00000425048 ACOX2Q99424 681 aa4.19□□□□□ -1.74
LINC01040-201ENST00000425048 VEZTQ9HBM0 779 aa4.19□□□□□ -1.74
LINC01040-201ENST00000425048 KLHL8Q9P2G9 620 aaPredicted RBP4.19□□□□□ -1.74
LINC01040-201ENST00000425048 FLT1P17948 1338 aa4.19□□□□□ -1.74
LINC01040-201ENST00000425048 A0A1W2PP11 408 aa4.18□□□□□ -1.74
LINC01040-201ENST00000425048 SLCO1B7G3V0H7 640 aa4.18□□□□□ -1.74
LINC01040-201ENST00000425048 M0QZ24 198 aa4.18□□□□□ -1.74
LINC01040-201ENST00000425048 PLOD2O00469 737 aa4.18□□□□□ -1.74
LINC01040-201ENST00000425048 ITGA3P26006 1051 aa4.18□□□□□ -1.74
LINC01040-201ENST00000425048 PPARDQ03181 441 aa4.18□□□□□ -1.74
LINC01040-201ENST00000425048 UBE3AQ05086 875 aa4.18□□□□□ -1.74
LINC01040-201ENST00000425048 UBE4AQ14139 1066 aa4.18□□□□□ -1.74
LINC01040-201ENST00000425048 ADAMTSL4-AS1Q5T5F5 129 aa4.18□□□□□ -1.74
LINC01040-201ENST00000425048 PAPD4Q6PIY7 484 aaKnown RBP4.18□□□□□ -1.74
LINC01040-201ENST00000425048 PACS1Q6VY07 963 aa4.18□□□□□ -1.74
LINC01040-201ENST00000425048 DPPA4Q7L190 304 aa4.18□□□□□ -1.74
LINC01040-201ENST00000425048 ZNF614Q8N883 585 aa4.18□□□□□ -1.74
LINC01040-201ENST00000425048 C18orf12Q96KH6 178 aa4.18□□□□□ -1.74
LINC01040-201ENST00000425048 PRMT6Q96LA8 375 aaPredicted RBP4.18□□□□□ -1.74
LINC01040-201ENST00000425048 SIX2Q9NPC8 291 aa4.18□□□□□ -1.74
LINC01040-201ENST00000425048 SLC38A7Q9NVC3 462 aa4.18□□□□□ -1.74
LINC01040-201ENST00000425048 FAM120CQ9NX05 1096 aaKnown RBP4.18□□□□□ -1.74
LINC01040-201ENST00000425048 PPP1R14DQ9NXH3 145 aa4.18□□□□□ -1.74
LINC01040-201ENST00000425048 TMEM181Q9P2C4 612 aa4.18□□□□□ -1.74
LINC01040-201ENST00000425048 LRRC53A6NM62 1247 aa4.17□□□□□ -1.74
LINC01040-201ENST00000425048 PRR32B1ATL7 298 aa4.17□□□□□ -1.74
LINC01040-201ENST00000425048 CLPTM1O96005 669 aa4.17□□□□□ -1.74
LINC01040-201ENST00000425048 CAMK1Q14012 370 aa4.17□□□□□ -1.74
LINC01040-201ENST00000425048 DUOXA1Q1HG43 343 aa4.17□□□□□ -1.74
LINC01040-201ENST00000425048 COL28A1Q2UY09 1125 aa4.17□□□□□ -1.74
LINC01040-201ENST00000425048 SNAI3Q3KNW1 292 aa4.17□□□□□ -1.74
LINC01040-201ENST00000425048 NAA35Q5VZE5 725 aa4.17□□□□□ -1.74
LINC01040-201ENST00000425048 BHLHB9Q6PI77 547 aa4.17□□□□□ -1.74
LINC01040-201ENST00000425048 SAMD3Q8N6K7 520 aa4.17□□□□□ -1.74
LINC01040-201ENST00000425048 UTP15Q8TED0 518 aaKnown RBP4.17□□□□□ -1.74
LINC01040-201ENST00000425048 SLC39A13Q96H72 371 aa4.17□□□□□ -1.74
LINC01040-201ENST00000425048 OXNAD1Q96HP4 312 aaPredicted RBP4.17□□□□□ -1.74
LINC01040-201ENST00000425048 ZNF414Q96IQ9 312 aa4.17□□□□□ -1.74
LINC01040-201ENST00000425048 AGAP3Q96P47 875 aa4.17□□□□□ -1.74
LINC01040-201ENST00000425048 APOBEC3GQ9HC16 384 aaKnown RBP4.17□□□□□ -1.74
LINC01040-201ENST00000425048 MPP6Q9NZW5 540 aa4.17□□□□□ -1.74
LINC01040-201ENST00000425048 MAGEB17A8MXT2 336 aa4.16□□□□□ -1.74
LINC01040-201ENST00000425048 SLC22A2O15244 555 aa4.16□□□□□ -1.74
LINC01040-201ENST00000425048 ZFAND5O76080 213 aa4.16□□□□□ -1.74
LINC01040-201ENST00000425048 HMBSP08397 361 aa4.16□□□□□ -1.74
LINC01040-201ENST00000425048 FAM157CP0CG43 387 aa4.16□□□□□ -1.74
LINC01040-201ENST00000425048 SHC1P29353 583 aa4.16□□□□□ -1.74
LINC01040-201ENST00000425048 FGFBP1Q14512 234 aa4.16□□□□□ -1.74
LINC01040-201ENST00000425048 SLC9B1Q4ZJI4 515 aa4.16□□□□□ -1.74
LINC01040-201ENST00000425048 CCDC13Q8IYE1 715 aa4.16□□□□□ -1.74
LINC01040-201ENST00000425048 ZNF611Q8N823 705 aa4.16□□□□□ -1.74
LINC01040-201ENST00000425048 PPP1R13BQ96KQ4 1090 aa4.16□□□□□ -1.74
LINC01040-201ENST00000425048 ZNF300Q96RE9 604 aaPredicted RBP4.16□□□□□ -1.74
LINC01040-201ENST00000425048 ECHDC1Q9NTX5 307 aa4.16□□□□□ -1.74
LINC01040-201ENST00000425048 KLHL9Q9P2J3 617 aa4.16□□□□□ -1.74
LINC01040-201ENST00000425048 ASIC3Q9UHC3 531 aa4.16□□□□□ -1.74
LINC01040-201ENST00000425048 ADAMTS9Q9P2N4 1935 aa4.15□□□□□ -1.74
LINC01040-201ENST00000425048 TMEM178BH3BS89 294 aa4.15□□□□□ -1.75
LINC01040-201ENST00000425048 SYNCRIPO60506 623 aaKnown RBP4.15□□□□□ -1.75
LINC01040-201ENST00000425048 IFIT1P09914 478 aaKnown RBP4.15□□□□□ -1.75
LINC01040-201ENST00000425048 LIFP15018 202 aa4.15□□□□□ -1.75
LINC01040-201ENST00000425048 UBA1P22314 1058 aaKnown RBP4.15□□□□□ -1.75
LINC01040-201ENST00000425048 GATA2P23769 480 aaPredicted RBP4.15□□□□□ -1.75
LINC01040-201ENST00000425048 SNRPD1P62314 119 aaKnown RBP4.15□□□□□ -1.75
LINC01040-201ENST00000425048 ALS2CLQ60I27 953 aa4.15□□□□□ -1.75
LINC01040-201ENST00000425048 ERC1Q8IUD2 1116 aa4.15□□□□□ -1.75
LINC01040-201ENST00000425048 GBGT1Q8N5D6 347 aa4.15□□□□□ -1.75
LINC01040-201ENST00000425048 ZNRF4Q8WWF5 429 aa4.15□□□□□ -1.75
LINC01040-201ENST00000425048 IGSF8Q969P0 613 aa4.15□□□□□ -1.75
LINC01040-201ENST00000425048 FUZQ9BT04 418 aa4.15□□□□□ -1.75
LINC01040-201ENST00000425048 RIC8AQ9NPQ8 531 aa4.15□□□□□ -1.75
LINC01040-201ENST00000425048 ASAH2Q9NR71 780 aa4.15□□□□□ -1.75
LINC01040-201ENST00000425048 SLC6A13Q9NSD5 602 aa4.15□□□□□ -1.75
LINC01040-201ENST00000425048 OR14J1Q9UGF5 321 aa4.15□□□□□ -1.75
LINC01040-201ENST00000425048 AGRNO00468 2067 aa4.15□□□□□ -1.75
LINC01040-201ENST00000425048 TNPO2O14787 897 aaKnown RBP4.14□□□□□ -1.75
LINC01040-201ENST00000425048 SEC31AO94979 1220 aaKnown RBP4.14□□□□□ -1.75
LINC01040-201ENST00000425048 TLX1P31314 330 aaPredicted RBP4.14□□□□□ -1.75
LINC01040-201ENST00000425048 KRTAP10-8P60410 259 aa4.14□□□□□ -1.75
LINC01040-201ENST00000425048 RIGQ13278 110 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms