RNA–Protein interactions for RNA: ENST00000424804.6

VRK3-203, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,061 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-203ENST00000424804 RAVER1Q8IY67 606 aaKnown RBP12.85□□□□□ -0.35
VRK3-203ENST00000424804 NRSN1Q8IZ57 195 aa12.85□□□□□ -0.35
VRK3-203ENST00000424804 SYCE1Q8N0S2 351 aa12.85□□□□□ -0.35
VRK3-203ENST00000424804 CNTD1Q8N815 330 aa12.85□□□□□ -0.35
VRK3-203ENST00000424804 JPH3Q8WXH2 748 aaPredicted RBP12.85□□□□□ -0.35
VRK3-203ENST00000424804 OLFM3Q96PB7 478 aa12.85□□□□□ -0.35
VRK3-203ENST00000424804 FAM118BQ9BPY3 351 aa12.85□□□□□ -0.35
VRK3-203ENST00000424804 GRPEL1Q9HAV7 217 aa12.85□□□□□ -0.35
VRK3-203ENST00000424804 PCDH9Q9HC56 1237 aa12.85□□□□□ -0.35
VRK3-203ENST00000424804 AMACRQ9UHK6 382 aa12.85□□□□□ -0.35
VRK3-203ENST00000424804 PRKAB1Q9Y478 270 aa12.85□□□□□ -0.35
VRK3-203ENST00000424804 ADGRG1Q9Y653 693 aa12.85□□□□□ -0.35
VRK3-203ENST00000424804 RELNP78509 3460 aa12.85□□□□□ -0.35
VRK3-203ENST00000424804 FLNCQ14315 2725 aa12.84□□□□□ -0.35
VRK3-203ENST00000424804 MAST4O15021 2626 aa12.84□□□□□ -0.35
VRK3-203ENST00000424804 INPP4BO15327 924 aa12.84□□□□□ -0.35
VRK3-203ENST00000424804 NRDCO43847 1150 aa12.84□□□□□ -0.35
VRK3-203ENST00000424804 SLC28A2O43868 658 aa12.84□□□□□ -0.35
VRK3-203ENST00000424804 WISP1O95388 367 aa12.84□□□□□ -0.35
VRK3-203ENST00000424804 SLC4A1P02730 911 aa12.84□□□□□ -0.35
VRK3-203ENST00000424804 ATP1A1P05023 1023 aaKnown RBP12.84□□□□□ -0.35
VRK3-203ENST00000424804 CES1P23141 567 aa12.84□□□□□ -0.35
VRK3-203ENST00000424804 UGT1A3P35503 534 aa12.84□□□□□ -0.35
VRK3-203ENST00000424804 SPINT3P49223 89 aa12.84□□□□□ -0.35
VRK3-203ENST00000424804 GALNT3Q14435 633 aa12.84□□□□□ -0.35
VRK3-203ENST00000424804 IYDQ6PHW0 289 aa12.84□□□□□ -0.35
VRK3-203ENST00000424804 NT5DC3Q86UY8 548 aa12.84□□□□□ -0.35
VRK3-203ENST00000424804 UBL4BQ8N7F7 174 aa12.84□□□□□ -0.35
VRK3-203ENST00000424804 CCDC112Q8NEF3 446 aa12.84□□□□□ -0.35
VRK3-203ENST00000424804 ART4Q93070 314 aa12.84□□□□□ -0.35
VRK3-203ENST00000424804 OSBPL8Q9BZF1 889 aa12.84□□□□□ -0.35
VRK3-203ENST00000424804 BRD8Q9H0E9 1235 aa12.84□□□□□ -0.35
VRK3-203ENST00000424804 CDH19Q9H159 772 aa12.84□□□□□ -0.35
VRK3-203ENST00000424804 C10orf88Q9H8K7 445 aa12.84□□□□□ -0.35
VRK3-203ENST00000424804 UBP1Q9NZI7 540 aa12.84□□□□□ -0.35
VRK3-203ENST00000424804 KLHL8Q9P2G9 620 aaPredicted RBP12.84□□□□□ -0.35
VRK3-203ENST00000424804 TBC1D29Q9UFV1 150 aa12.84□□□□□ -0.35
VRK3-203ENST00000424804 CAPN6Q9Y6Q1 641 aa12.84□□□□□ -0.35
VRK3-203ENST00000424804 COL12A1Q99715 3063 aa12.83□□□□□ -0.36
VRK3-203ENST00000424804 PTPN13Q12923 2485 aa12.83□□□□□ -0.36
VRK3-203ENST00000424804 PRR19A6NJB7 356 aa12.83□□□□□ -0.36
VRK3-203ENST00000424804 B4E171 279 aa12.83□□□□□ -0.36
VRK3-203ENST00000424804 STMND1H3BQB6 276 aa12.83□□□□□ -0.36
VRK3-203ENST00000424804 ARHGAP6O43182 974 aa12.83□□□□□ -0.36
VRK3-203ENST00000424804 SUV39H1O43463 412 aa12.83□□□□□ -0.36
VRK3-203ENST00000424804 KRT86O43790 486 aa12.83□□□□□ -0.36
VRK3-203ENST00000424804 PYGMP11217 842 aa12.83□□□□□ -0.36
VRK3-203ENST00000424804 PTPN3P26045 913 aa12.83□□□□□ -0.36
VRK3-203ENST00000424804 TSPAN7P41732 249 aa12.83□□□□□ -0.36
VRK3-203ENST00000424804 RPL26P61254 145 aaKnown RBP12.83□□□□□ -0.36
VRK3-203ENST00000424804 OTUD4Q01804 1114 aaKnown RBP12.83□□□□□ -0.36
VRK3-203ENST00000424804 PRKD1Q15139 912 aaPredicted RBP12.83□□□□□ -0.36
VRK3-203ENST00000424804 PPP2R5EQ16537 467 aa12.83□□□□□ -0.36
VRK3-203ENST00000424804 TAZQ16635 292 aa12.83□□□□□ -0.36
VRK3-203ENST00000424804 BBS12Q6ZW61 710 aa12.83□□□□□ -0.36
VRK3-203ENST00000424804 TIPARPQ7Z3E1 657 aaKnown RBP12.83□□□□□ -0.36
VRK3-203ENST00000424804 LRRC8AQ8IWT6 810 aa12.83□□□□□ -0.36
VRK3-203ENST00000424804 LRRC57Q8N9N7 239 aa12.83□□□□□ -0.36
VRK3-203ENST00000424804 AGBL5Q8NDL9 886 aa12.83□□□□□ -0.36
VRK3-203ENST00000424804 SPATA22Q8NHS9 363 aa12.83□□□□□ -0.36
VRK3-203ENST00000424804 ALG3Q92685 438 aa12.83□□□□□ -0.36
VRK3-203ENST00000424804 TADA1Q96BN2 335 aa12.83□□□□□ -0.36
VRK3-203ENST00000424804 TRIB3Q96RU7 358 aa12.83□□□□□ -0.36
VRK3-203ENST00000424804 HERPUD2Q9BSE4 406 aa12.83□□□□□ -0.36
VRK3-203ENST00000424804 DDA1Q9BW61 102 aa12.83□□□□□ -0.36
VRK3-203ENST00000424804 TSGA10Q9BZW7 698 aa12.83□□□□□ -0.36
VRK3-203ENST00000424804 LZTFL1Q9NQ48 299 aa12.83□□□□□ -0.36
VRK3-203ENST00000424804 WDR70Q9NW82 654 aa12.83□□□□□ -0.36
VRK3-203ENST00000424804 KCNK4Q9NYG8 393 aa12.83□□□□□ -0.36
VRK3-203ENST00000424804 VPS18Q9P253 973 aa12.83□□□□□ -0.36
VRK3-203ENST00000424804 PILRAQ9UKJ1 303 aa12.83□□□□□ -0.36
VRK3-203ENST00000424804 RPL26L1Q9UNX3 145 aaKnown RBP12.83□□□□□ -0.36
VRK3-203ENST00000424804 NAV2Q8IVL1 2488 aa12.82□□□□□ -0.36
VRK3-203ENST00000424804 ANKRD66B4E2M5 251 aa12.82□□□□□ -0.36
VRK3-203ENST00000424804 APOC4-APOC2K7ER74 178 aa12.82□□□□□ -0.36
VRK3-203ENST00000424804 PMPCBO75439 489 aa12.82□□□□□ -0.36
VRK3-203ENST00000424804 MT-CYBP00156 380 aaPredicted RBP12.82□□□□□ -0.36
VRK3-203ENST00000424804 APOC2P02655 101 aa12.82□□□□□ -0.36
VRK3-203ENST00000424804 PIRTP0C851 137 aa12.82□□□□□ -0.36
VRK3-203ENST00000424804 LIFP15018 202 aa12.82□□□□□ -0.36
VRK3-203ENST00000424804 NFKB1P19838 968 aa12.82□□□□□ -0.36
VRK3-203ENST00000424804 TNNT3P45378 269 aaPredicted RBP12.82□□□□□ -0.36
VRK3-203ENST00000424804 EIF3EP60228 445 aaKnown RBP12.82□□□□□ -0.36
VRK3-203ENST00000424804 COPS2P61201 443 aa12.82□□□□□ -0.36
VRK3-203ENST00000424804 GPLD1P80108 840 aa12.82□□□□□ -0.36
VRK3-203ENST00000424804 MC2RQ01718 297 aa12.82□□□□□ -0.36
VRK3-203ENST00000424804 LRP8Q14114 963 aa12.82□□□□□ -0.36
VRK3-203ENST00000424804 TEX44Q53QW1 395 aa12.82□□□□□ -0.36
VRK3-203ENST00000424804 ANKS6Q68DC2 871 aa12.82□□□□□ -0.36
VRK3-203ENST00000424804 PID1Q7Z2X4 250 aa12.82□□□□□ -0.36
VRK3-203ENST00000424804 GALNT13Q8IUC8 556 aa12.82□□□□□ -0.36
VRK3-203ENST00000424804 ACTL9Q8TC94 416 aa12.82□□□□□ -0.36
VRK3-203ENST00000424804 RTP4Q96DX8 246 aa12.82□□□□□ -0.36
VRK3-203ENST00000424804 QKIQ96PU8 341 aaKnown RBP eCLIP12.82□□□□□ -0.36
VRK3-203ENST00000424804 DPYSL5Q9BPU6 564 aa12.82□□□□□ -0.36
VRK3-203ENST00000424804 SLC25A51Q9H1U9 297 aa12.82□□□□□ -0.36
VRK3-203ENST00000424804 CLMPQ9H6B4 373 aa12.82□□□□□ -0.36
VRK3-203ENST00000424804 GLOD4Q9HC38 313 aa12.82□□□□□ -0.36
VRK3-203ENST00000424804 SARS2Q9NP81 518 aaKnown RBP12.82□□□□□ -0.36
VRK3-203ENST00000424804 GEMIN8Q9NWZ8 242 aaKnown RBP12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms