RNA–Protein interactions for RNA: ENST00000424270.6

SDCBP-203, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SDCBP, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-203ENST00000424270 ARSGQ96EG1 525 aa6.21□□□□□ -1.42
SDCBP-203ENST00000424270 SCARF2Q96GP6 870 aaPredicted RBP6.21□□□□□ -1.42
SDCBP-203ENST00000424270 C1orf74Q96LT6 269 aa6.21□□□□□ -1.42
SDCBP-203ENST00000424270 NT5C1BQ96P26 610 aa6.21□□□□□ -1.42
SDCBP-203ENST00000424270 SLC2A13Q96QE2 648 aa6.21□□□□□ -1.42
SDCBP-203ENST00000424270 MAP3K3Q99759 626 aa6.21□□□□□ -1.42
SDCBP-203ENST00000424270 ZSWIM1Q9BR11 485 aa6.21□□□□□ -1.42
SDCBP-203ENST00000424270 POLDIP3Q9BY77 421 aaKnown RBP6.21□□□□□ -1.42
SDCBP-203ENST00000424270 ENKD1Q9H0I2 346 aa6.21□□□□□ -1.42
SDCBP-203ENST00000424270 MAGEH1Q9H213 219 aa6.21□□□□□ -1.42
SDCBP-203ENST00000424270 KCTD10Q9H3F6 313 aa6.21□□□□□ -1.42
SDCBP-203ENST00000424270 MAGEF1Q9HAY2 307 aa6.21□□□□□ -1.42
SDCBP-203ENST00000424270 ANLNQ9NQW6 1124 aa6.21□□□□□ -1.42
SDCBP-203ENST00000424270 P4HTMQ9NXG6 502 aa6.21□□□□□ -1.42
SDCBP-203ENST00000424270 KCTD5Q9NXV2 234 aa6.21□□□□□ -1.42
SDCBP-203ENST00000424270 OGFRQ9NZT2 677 aa6.21□□□□□ -1.42
SDCBP-203ENST00000424270 TNFRSF10DQ9UBN6 386 aa6.21□□□□□ -1.42
SDCBP-203ENST00000424270 NDOR1Q9UHB4 597 aa6.21□□□□□ -1.42
SDCBP-203ENST00000424270 CD84Q9UIB8 345 aa6.21□□□□□ -1.42
SDCBP-203ENST00000424270 ST6GALNAC2Q9UJ37 374 aa6.21□□□□□ -1.42
SDCBP-203ENST00000424270 SLC30A1Q9Y6M5 507 aa6.21□□□□□ -1.42
SDCBP-203ENST00000424270 IGLV3-10A0A075B6K4 115 aa6.2□□□□□ -1.42
SDCBP-203ENST00000424270 IGHV5-51A0A0C4DH38 117 aa6.2□□□□□ -1.42
SDCBP-203ENST00000424270 CXorf51AA0A1B0GTR3 108 aa6.2□□□□□ -1.42
SDCBP-203ENST00000424270 TSPAN11A1L157 253 aa6.2□□□□□ -1.42
SDCBP-203ENST00000424270 DYTNA2CJ06 578 aa6.2□□□□□ -1.42
SDCBP-203ENST00000424270 CCDC78A2IDD5 438 aa6.2□□□□□ -1.42
SDCBP-203ENST00000424270 K7ELQ4 463 aaPredicted RBP6.2□□□□□ -1.42
SDCBP-203ENST00000424270 DDX3YO15523 660 aaKnown RBP6.2□□□□□ -1.42
SDCBP-203ENST00000424270 LY6G6DO95868 133 aa6.2□□□□□ -1.42
SDCBP-203ENST00000424270 MAPKAPK2P49137 400 aa6.2□□□□□ -1.42
SDCBP-203ENST00000424270 CXCR3P49682 368 aa6.2□□□□□ -1.42
SDCBP-203ENST00000424270 TUBB4BP68371 445 aa6.2□□□□□ -1.42
SDCBP-203ENST00000424270 HSD11B2P80365 405 aa6.2□□□□□ -1.42
SDCBP-203ENST00000424270 EIF4EBP2Q13542 120 aaPredicted RBP6.2□□□□□ -1.42
SDCBP-203ENST00000424270 TUBB2AQ13885 445 aa6.2□□□□□ -1.42
SDCBP-203ENST00000424270 SSPNQ14714 243 aa6.2□□□□□ -1.42
SDCBP-203ENST00000424270 PLCL1Q15111 1095 aa6.2□□□□□ -1.42
SDCBP-203ENST00000424270 CBWD6Q4V339 395 aa6.2□□□□□ -1.42
SDCBP-203ENST00000424270 CBWD3Q5JTY5 395 aa6.2□□□□□ -1.42
SDCBP-203ENST00000424270 DNTTIP2Q5QJE6 756 aaKnown RBP6.2□□□□□ -1.42
SDCBP-203ENST00000424270 CBWD5Q5RIA9 395 aa6.2□□□□□ -1.42
SDCBP-203ENST00000424270 ARMC6Q6NXE6 501 aa6.2□□□□□ -1.42
SDCBP-203ENST00000424270 KLHL35Q6PF15 583 aa6.2□□□□□ -1.42
SDCBP-203ENST00000424270 C11orf57Q6ZUT1 292 aaPredicted RBP6.2□□□□□ -1.42
SDCBP-203ENST00000424270 FAM183BPQ6ZVS7 135 aa6.2□□□□□ -1.42
SDCBP-203ENST00000424270 PASD1Q8IV76 773 aa6.2□□□□□ -1.42
SDCBP-203ENST00000424270 PHC2Q8IXK0 858 aa6.2□□□□□ -1.42
SDCBP-203ENST00000424270 ZNF683Q8IZ20 524 aa6.2□□□□□ -1.42
SDCBP-203ENST00000424270 DSELQ8IZU8 1212 aa6.2□□□□□ -1.42
SDCBP-203ENST00000424270 KIAA0895Q8NCT3 520 aa6.2□□□□□ -1.42
SDCBP-203ENST00000424270 CATSPER1Q8NEC5 780 aa6.2□□□□□ -1.42
SDCBP-203ENST00000424270 WFDC11Q8NEX6 87 aa6.2□□□□□ -1.42
SDCBP-203ENST00000424270 SUN3Q8TAQ9 357 aa6.2□□□□□ -1.42
SDCBP-203ENST00000424270 EPS8L1Q8TE68 723 aa6.2□□□□□ -1.42
SDCBP-203ENST00000424270 STK32AQ8WU08 396 aa6.2□□□□□ -1.42
SDCBP-203ENST00000424270 TEKT4Q8WW24 435 aa6.2□□□□□ -1.42
SDCBP-203ENST00000424270 CCDC47Q96A33 483 aaKnown RBP6.2□□□□□ -1.42
SDCBP-203ENST00000424270 SPATA32Q96LK8 384 aa6.2□□□□□ -1.42
SDCBP-203ENST00000424270 PCMTD1Q96MG8 357 aaPredicted RBP6.2□□□□□ -1.42
SDCBP-203ENST00000424270 ALPK1Q96QP1 1244 aa6.2□□□□□ -1.42
SDCBP-203ENST00000424270 TUBGCP5Q96RT8 1024 aa6.2□□□□□ -1.42
SDCBP-203ENST00000424270 TMEM121Q9BTD3 319 aa6.2□□□□□ -1.42
SDCBP-203ENST00000424270 TUBB2BQ9BVA1 445 aa6.2□□□□□ -1.42
SDCBP-203ENST00000424270 GTPBP4Q9BZE4 634 aaKnown RBP6.2□□□□□ -1.42
SDCBP-203ENST00000424270 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.2□□□□□ -1.42
SDCBP-203ENST00000424270 ACTR5Q9H9F9 607 aaPredicted RBP6.2□□□□□ -1.42
SDCBP-203ENST00000424270 ASNSD1Q9NWL6 643 aa6.2□□□□□ -1.42
SDCBP-203ENST00000424270 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP6.2□□□□□ -1.42
SDCBP-203ENST00000424270 UBA2Q9UBT2 640 aaPredicted RBP6.2□□□□□ -1.42
SDCBP-203ENST00000424270 B4GALT6Q9UBX8 382 aa6.2□□□□□ -1.42
SDCBP-203ENST00000424270 POLEQ07864 2286 aa6.2□□□□□ -1.42
SDCBP-203ENST00000424270 CSPG4Q6UVK1 2322 aa6.19□□□□□ -1.42
SDCBP-203ENST00000424270 TLCD2A6NGC4 264 aa6.19□□□□□ -1.42
SDCBP-203ENST00000424270 FAM90A27PA6NNH2 459 aa6.19□□□□□ -1.42
SDCBP-203ENST00000424270 INAFM1C9JVW0 142 aa6.19□□□□□ -1.42
SDCBP-203ENST00000424270 FAM227AF5H4B4 570 aa6.19□□□□□ -1.42
SDCBP-203ENST00000424270 RNF225M0QZC1 329 aaPredicted RBP6.19□□□□□ -1.42
SDCBP-203ENST00000424270 SMAD7O15105 426 aaKnown RBP6.19□□□□□ -1.42
SDCBP-203ENST00000424270 POLR2DO15514 142 aaKnown RBP6.19□□□□□ -1.42
SDCBP-203ENST00000424270 ALOX12BO75342 701 aa6.19□□□□□ -1.42
SDCBP-203ENST00000424270 PMPCBO75439 489 aa6.19□□□□□ -1.42
SDCBP-203ENST00000424270 MTA2O94776 668 aa6.19□□□□□ -1.42
SDCBP-203ENST00000424270 SLCO2B1O94956 709 aa6.19□□□□□ -1.42
SDCBP-203ENST00000424270 RASAL1O95294 804 aa6.19□□□□□ -1.42
SDCBP-203ENST00000424270 JCHAINP01591 159 aa6.19□□□□□ -1.42
SDCBP-203ENST00000424270 ATP1A1P05023 1023 aaKnown RBP6.19□□□□□ -1.42
SDCBP-203ENST00000424270 CYP2A6P11509 494 aaPredicted RBP6.19□□□□□ -1.42
SDCBP-203ENST00000424270 ABOP16442 354 aa6.19□□□□□ -1.42
SDCBP-203ENST00000424270 RHOQP17081 205 aa6.19□□□□□ -1.42
SDCBP-203ENST00000424270 USP8P40818 1118 aa6.19□□□□□ -1.42
SDCBP-203ENST00000424270 HADHAP40939 763 aa6.19□□□□□ -1.42
SDCBP-203ENST00000424270 TDGF1P3P51864 188 aa6.19□□□□□ -1.42
SDCBP-203ENST00000424270 ENPEPQ07075 957 aa6.19□□□□□ -1.42
SDCBP-203ENST00000424270 ADCY2Q08462 1091 aa6.19□□□□□ -1.42
SDCBP-203ENST00000424270 CETN1Q12798 172 aa6.19□□□□□ -1.42
SDCBP-203ENST00000424270 INSCQ1MX18 579 aa6.19□□□□□ -1.42
SDCBP-203ENST00000424270 PLA2G4EQ3MJ16 856 aa6.19□□□□□ -1.42
SDCBP-203ENST00000424270 INO80DQ53TQ3 878 aaPredicted RBP6.19□□□□□ -1.42
SDCBP-203ENST00000424270 PLEKHS1Q5SXH7 462 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms