RNA–Protein interactions for RNA: ENST00000423271.7

USB1-202, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-202ENST00000423271 OXNAD1Q96HP4 312 aaPredicted RBP15.02■□□□□ -0
USB1-202ENST00000423271 QKIQ96PU8 341 aaKnown RBP eCLIP15.02■□□□□ -0
USB1-202ENST00000423271 CMKLR1Q99788 373 aa15.02■□□□□ -0
USB1-202ENST00000423271 HERPUD2Q9BSE4 406 aa15.02■□□□□ -0
USB1-202ENST00000423271 ZSCAN5AQ9BUG6 496 aa15.02■□□□□ -0
USB1-202ENST00000423271 HEMGNQ9BXL5 484 aa15.02■□□□□ -0
USB1-202ENST00000423271 OR2AG1Q9H205 316 aa15.02■□□□□ -0
USB1-202ENST00000423271 CARD9Q9H257 536 aa15.02■□□□□ -0
USB1-202ENST00000423271 KCNK4Q9NYG8 393 aa15.02■□□□□ -0
USB1-202ENST00000423271 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.02■□□□□ -0
USB1-202ENST00000423271 KLHL8Q9P2G9 620 aaPredicted RBP15.02■□□□□ -0
USB1-202ENST00000423271 NFKBIL1Q9UBC1 381 aaPredicted RBP15.02■□□□□ -0
USB1-202ENST00000423271 ACSL6Q9UKU0 697 aa15.02■□□□□ -0
USB1-202ENST00000423271 PACSIN2Q9UNF0 486 aaPredicted RBP15.02■□□□□ -0
USB1-202ENST00000423271 CFAP46Q8IYW2 2715 aa15.01□□□□□ -0.01
USB1-202ENST00000423271 C9orf172C9J069 976 aa15.01□□□□□ -0.01
USB1-202ENST00000423271 NVLO15381 856 aaKnown RBP15.01□□□□□ -0.01
USB1-202ENST00000423271 GRID2O43424 1007 aa15.01□□□□□ -0.01
USB1-202ENST00000423271 SNX2O60749 519 aa15.01□□□□□ -0.01
USB1-202ENST00000423271 C1QL1O75973 258 aa15.01□□□□□ -0.01
USB1-202ENST00000423271 LIMK2P53671 638 aa15.01□□□□□ -0.01
USB1-202ENST00000423271 WNT3AP56704 352 aa15.01□□□□□ -0.01
USB1-202ENST00000423271 CLPPQ16740 277 aaPredicted RBP15.01□□□□□ -0.01
USB1-202ENST00000423271 PLA2G4EQ3MJ16 856 aa15.01□□□□□ -0.01
USB1-202ENST00000423271 CHCHD2P9Q5T1J5 151 aaPredicted RBP15.01□□□□□ -0.01
USB1-202ENST00000423271 CRTC3Q6UUV7 619 aa15.01□□□□□ -0.01
USB1-202ENST00000423271 ADGRG6Q86SQ4 1221 aa15.01□□□□□ -0.01
USB1-202ENST00000423271 RCOR2Q8IZ40 523 aa15.01□□□□□ -0.01
USB1-202ENST00000423271 ALG3Q92685 438 aa15.01□□□□□ -0.01
USB1-202ENST00000423271 GLYATL1Q969I3 302 aa15.01□□□□□ -0.01
USB1-202ENST00000423271 PMEPA1Q969W9 287 aa15.01□□□□□ -0.01
USB1-202ENST00000423271 RBM41Q96IZ5 413 aaKnown RBP15.01□□□□□ -0.01
USB1-202ENST00000423271 MRGPRX2Q96LB1 330 aa15.01□□□□□ -0.01
USB1-202ENST00000423271 C10orf88Q9H8K7 445 aa15.01□□□□□ -0.01
USB1-202ENST00000423271 RMI1Q9H9A7 625 aa15.01□□□□□ -0.01
USB1-202ENST00000423271 BPIFA1Q9NP55 256 aa15.01□□□□□ -0.01
USB1-202ENST00000423271 FAM153AQ9UHL3 310 aa15.01□□□□□ -0.01
USB1-202ENST00000423271 TMPRSS11EQ9UL52 423 aa15.01□□□□□ -0.01
USB1-202ENST00000423271 SDK2Q58EX2 2172 aa15□□□□□ -0.01
USB1-202ENST00000423271 K7ENP7 123 aa15□□□□□ -0.01
USB1-202ENST00000423271 DDX3YO15523 660 aaKnown RBP15□□□□□ -0.01
USB1-202ENST00000423271 ZW10O43264 779 aa15□□□□□ -0.01
USB1-202ENST00000423271 MTX2O75431 263 aa15□□□□□ -0.01
USB1-202ENST00000423271 SLC25A14O95258 325 aaPredicted RBP15□□□□□ -0.01
USB1-202ENST00000423271 THRAP10827 490 aa15□□□□□ -0.01
USB1-202ENST00000423271 RWDD2BP57060 319 aa15□□□□□ -0.01
USB1-202ENST00000423271 HHEXQ03014 270 aa15□□□□□ -0.01
USB1-202ENST00000423271 NFATC2Q13469 925 aa15□□□□□ -0.01
USB1-202ENST00000423271 PPP2R5EQ16537 467 aa15□□□□□ -0.01
USB1-202ENST00000423271 KHDC1Q4VXA5 237 aaKnown RBP15□□□□□ -0.01
USB1-202ENST00000423271 SIRPB2Q5JXA9 342 aa15□□□□□ -0.01
USB1-202ENST00000423271 KIAA1614Q5VZ46 1190 aa15□□□□□ -0.01
USB1-202ENST00000423271 CCDC70Q6NSX1 233 aa15□□□□□ -0.01
USB1-202ENST00000423271 IYDQ6PHW0 289 aa15□□□□□ -0.01
USB1-202ENST00000423271 INO80CQ6PI98 192 aaPredicted RBP15□□□□□ -0.01
USB1-202ENST00000423271 BBS12Q6ZW61 710 aa15□□□□□ -0.01
USB1-202ENST00000423271 ZFAND4Q86XD8 727 aa15□□□□□ -0.01
USB1-202ENST00000423271 PHYKPLQ8IUZ5 450 aa15□□□□□ -0.01
USB1-202ENST00000423271 TTC30BQ8N4P2 665 aa15□□□□□ -0.01
USB1-202ENST00000423271 SLC25A41Q8N5S1 370 aa15□□□□□ -0.01
USB1-202ENST00000423271 OR4D9Q8NGE8 314 aa15□□□□□ -0.01
USB1-202ENST00000423271 SNRNP27Q8WVK2 155 aaKnown RBP15□□□□□ -0.01
USB1-202ENST00000423271 HTR3CQ8WXA8 447 aa15□□□□□ -0.01
USB1-202ENST00000423271 SLC38A3Q99624 504 aa15□□□□□ -0.01
USB1-202ENST00000423271 ZMYND15Q9H091 742 aa15□□□□□ -0.01
USB1-202ENST00000423271 PRDM8Q9NQV8 689 aa15□□□□□ -0.01
USB1-202ENST00000423271 RAD18Q9NS91 495 aa15□□□□□ -0.01
USB1-202ENST00000423271 LOC285095A0A1B0GVY8 99 aa14.99□□□□□ -0.01
USB1-202ENST00000423271 MIF4GDA9UHW6 222 aaKnown RBP14.99□□□□□ -0.01
USB1-202ENST00000423271 ERVH48-1M5A8F1 160 aa14.99□□□□□ -0.01
USB1-202ENST00000423271 HGSO14964 777 aaPredicted RBP14.99□□□□□ -0.01
USB1-202ENST00000423271 EFSO43281 561 aa14.99□□□□□ -0.01
USB1-202ENST00000423271 MTSS1O43312 755 aa14.99□□□□□ -0.01
USB1-202ENST00000423271 LIPCP11150 499 aa14.99□□□□□ -0.01
USB1-202ENST00000423271 GPLD1P80108 840 aa14.99□□□□□ -0.01
USB1-202ENST00000423271 SQSTM1Q13501 440 aa14.99□□□□□ -0.01
USB1-202ENST00000423271 PDPK2PQ6A1A2 396 aa14.99□□□□□ -0.01
USB1-202ENST00000423271 AADACL2Q6P093 401 aa14.99□□□□□ -0.01
USB1-202ENST00000423271 CCDC81Q6ZN84 652 aa14.99□□□□□ -0.01
USB1-202ENST00000423271 PID1Q7Z2X4 250 aa14.99□□□□□ -0.01
USB1-202ENST00000423271 REXO1L1PQ8IX06 675 aa14.99□□□□□ -0.01
USB1-202ENST00000423271 IPMKQ8NFU5 416 aa14.99□□□□□ -0.01
USB1-202ENST00000423271 HES6Q96HZ4 224 aa14.99□□□□□ -0.01
USB1-202ENST00000423271 FCRL5Q96RD9 977 aa14.99□□□□□ -0.01
USB1-202ENST00000423271 CCNL2Q96S94 520 aaPredicted RBP14.99□□□□□ -0.01
USB1-202ENST00000423271 OSGEPL1Q9H4B0 414 aa14.99□□□□□ -0.01
USB1-202ENST00000423271 TRIM39Q9HCM9 518 aa14.99□□□□□ -0.01
USB1-202ENST00000423271 SARS2Q9NP81 518 aaKnown RBP14.99□□□□□ -0.01
USB1-202ENST00000423271 KLC4Q9NSK0 619 aa14.99□□□□□ -0.01
USB1-202ENST00000423271 SLC23A2Q9UGH3 650 aa14.99□□□□□ -0.01
USB1-202ENST00000423271 GCN1Q92616 2671 aaKnown RBP14.98□□□□□ -0.01
USB1-202ENST00000423271 HACD1B0YJ81 288 aa14.98□□□□□ -0.01
USB1-202ENST00000423271 APOC4-APOC2K7ER74 178 aa14.98□□□□□ -0.01
USB1-202ENST00000423271 TK2O00142 265 aa14.98□□□□□ -0.01
USB1-202ENST00000423271 CHUKO15111 745 aa14.98□□□□□ -0.01
USB1-202ENST00000423271 GPR39O43194 453 aa14.98□□□□□ -0.01
USB1-202ENST00000423271 DUX1O43812 170 aa14.98□□□□□ -0.01
USB1-202ENST00000423271 APOC2P02655 101 aa14.98□□□□□ -0.01
USB1-202ENST00000423271 FGF3P11487 239 aaPredicted RBP14.98□□□□□ -0.01
USB1-202ENST00000423271 F3P13726 295 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms