RNA–Protein interactions for RNA: ENST00000423141.1

NPC1L1-203, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 2,554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-203ENST00000423141 EEDO75530 441 aaKnown RBP16.55■□□□□ 0.24
NPC1L1-203ENST00000423141 CYBBP04839 570 aa16.55■□□□□ 0.24
NPC1L1-203ENST00000423141 CDH1P12830 882 aa16.55■□□□□ 0.24
NPC1L1-203ENST00000423141 PCMT1P22061 227 aa16.55■□□□□ 0.24
NPC1L1-203ENST00000423141 CCNCP24863 283 aa16.55■□□□□ 0.24
NPC1L1-203ENST00000423141 EEFSECP57772 596 aaKnown RBP16.55■□□□□ 0.24
NPC1L1-203ENST00000423141 MTPNP58546 118 aa16.55■□□□□ 0.24
NPC1L1-203ENST00000423141 PLEKHG7Q6ZR37 379 aa16.55■□□□□ 0.24
NPC1L1-203ENST00000423141 SLC22A16Q86VW1 577 aa16.55■□□□□ 0.24
NPC1L1-203ENST00000423141 RNF34Q969K3 372 aa16.55■□□□□ 0.24
NPC1L1-203ENST00000423141 SMOQ99835 787 aa16.55■□□□□ 0.24
NPC1L1-203ENST00000423141 SLC39A8Q9C0K1 460 aa16.55■□□□□ 0.24
NPC1L1-203ENST00000423141 TPK1Q9H3S4 243 aa16.55■□□□□ 0.24
NPC1L1-203ENST00000423141 KCTD3Q9Y597 815 aa16.55■□□□□ 0.24
NPC1L1-203ENST00000423141 S1PR4O95977 384 aa16.55■□□□□ 0.24
NPC1L1-203ENST00000423141 DPEP1P16444 411 aa16.55■□□□□ 0.24
NPC1L1-203ENST00000423141 TCEA1P23193 301 aaKnown RBP16.55■□□□□ 0.24
NPC1L1-203ENST00000423141 GMPSP49915 693 aaPredicted RBP16.55■□□□□ 0.24
NPC1L1-203ENST00000423141 NKX2-5P52952 324 aaPredicted RBP16.55■□□□□ 0.24
NPC1L1-203ENST00000423141 WNT3AP56704 352 aa16.55■□□□□ 0.24
NPC1L1-203ENST00000423141 PM20D1Q6GTS8 502 aa16.55■□□□□ 0.24
NPC1L1-203ENST00000423141 TAC4Q86UU9 113 aa16.55■□□□□ 0.24
NPC1L1-203ENST00000423141 ABI1Q8IZP0 508 aa16.55■□□□□ 0.24
NPC1L1-203ENST00000423141 TMEM199Q8N511 208 aa16.55■□□□□ 0.24
NPC1L1-203ENST00000423141 ZMIZ2Q8NF64 920 aa16.55■□□□□ 0.24
NPC1L1-203ENST00000423141 GABPB2Q8TAK5 448 aaPredicted RBP16.55■□□□□ 0.24
NPC1L1-203ENST00000423141 BTN2A3PQ96KV6 586 aa16.55■□□□□ 0.24
NPC1L1-203ENST00000423141 PPM1MQ96MI6 270 aa16.55■□□□□ 0.24
NPC1L1-203ENST00000423141 EHD1Q9H4M9 534 aa16.55■□□□□ 0.24
NPC1L1-203ENST00000423141 RGS18Q9NS28 235 aa16.55■□□□□ 0.24
NPC1L1-203ENST00000423141 TMEM98Q9Y2Y6 226 aa16.55■□□□□ 0.24
NPC1L1-203ENST00000423141 DNAH12Q6ZR08 3092 aa16.55■□□□□ 0.24
NPC1L1-203ENST00000423141 NDUFS2O75306 463 aa16.54■□□□□ 0.24
NPC1L1-203ENST00000423141 DEAF1O75398 565 aaPredicted RBP16.54■□□□□ 0.24
NPC1L1-203ENST00000423141 PRSS23O95084 383 aa16.54■□□□□ 0.24
NPC1L1-203ENST00000423141 NADKO95544 446 aaPredicted RBP16.54■□□□□ 0.24
NPC1L1-203ENST00000423141 HTR1EP28566 365 aa16.54■□□□□ 0.24
NPC1L1-203ENST00000423141 PCYT1AP49585 367 aa16.54■□□□□ 0.24
NPC1L1-203ENST00000423141 LILRA4P59901 499 aa16.54■□□□□ 0.24
NPC1L1-203ENST00000423141 VBP1P61758 197 aa16.54■□□□□ 0.24
NPC1L1-203ENST00000423141 PLIN5Q00G26 463 aa16.54■□□□□ 0.24
NPC1L1-203ENST00000423141 TIAL1Q01085 375 aaKnown RBP eCLIP16.54■□□□□ 0.24
NPC1L1-203ENST00000423141 ARHGAP1Q07960 439 aa16.54■□□□□ 0.24
NPC1L1-203ENST00000423141 LIMS2Q7Z4I7 341 aa16.54■□□□□ 0.24
NPC1L1-203ENST00000423141 NANOGNBQ7Z5D8 188 aa16.54■□□□□ 0.24
NPC1L1-203ENST00000423141 ZCCHC7Q8N3Z6 543 aaKnown RBP16.54■□□□□ 0.24
NPC1L1-203ENST00000423141 ARL10Q8N8L6 244 aa16.54■□□□□ 0.24
NPC1L1-203ENST00000423141 OR7A2PQ8NGA2 310 aa16.54■□□□□ 0.24
NPC1L1-203ENST00000423141 PRKD2Q9BZL6 878 aa16.54■□□□□ 0.24
NPC1L1-203ENST00000423141 FAM49AQ9H0Q0 323 aaPredicted RBP16.54■□□□□ 0.24
NPC1L1-203ENST00000423141 CRTAC1Q9NQ79 661 aa16.54■□□□□ 0.24
NPC1L1-203ENST00000423141 ANKMY1Q9P2S6 941 aa16.54■□□□□ 0.24
NPC1L1-203ENST00000423141 ZNF236Q9UL36 1845 aa16.54■□□□□ 0.24
NPC1L1-203ENST00000423141 CCDC162PA2VCL2 907 aa16.54■□□□□ 0.24
NPC1L1-203ENST00000423141 C16orf96A6NNT2 1141 aa16.54■□□□□ 0.24
NPC1L1-203ENST00000423141 XPNPEP2O43895 674 aa16.54■□□□□ 0.24
NPC1L1-203ENST00000423141 GMNNO75496 209 aa16.54■□□□□ 0.24
NPC1L1-203ENST00000423141 ALOX5P09917 674 aa16.54■□□□□ 0.24
NPC1L1-203ENST00000423141 KCNAB2Q13303 367 aa16.54■□□□□ 0.24
NPC1L1-203ENST00000423141 NKG7Q16617 165 aa16.54■□□□□ 0.24
NPC1L1-203ENST00000423141 SPATS1Q496A3 300 aa16.54■□□□□ 0.24
NPC1L1-203ENST00000423141 MARCH8Q5T0T0 291 aa16.54■□□□□ 0.24
NPC1L1-203ENST00000423141 ZNF549Q6P9A3 640 aa16.54■□□□□ 0.24
NPC1L1-203ENST00000423141 DLK2Q6UY11 383 aa16.54■□□□□ 0.24
NPC1L1-203ENST00000423141 ARMCX2Q7L311 632 aa16.54■□□□□ 0.24
NPC1L1-203ENST00000423141 BHLHA9Q7RTU4 235 aa16.54■□□□□ 0.24
NPC1L1-203ENST00000423141 CCDC117Q8IWD4 279 aaPredicted RBP16.54■□□□□ 0.24
NPC1L1-203ENST00000423141 CALML6Q8TD86 181 aa16.54■□□□□ 0.24
NPC1L1-203ENST00000423141 VMP1Q96GC9 406 aa16.54■□□□□ 0.24
NPC1L1-203ENST00000423141 ITCHQ96J02 903 aa16.54■□□□□ 0.24
NPC1L1-203ENST00000423141 ZNF560Q96MR9 790 aa16.54■□□□□ 0.24
NPC1L1-203ENST00000423141 ACOX2Q99424 681 aa16.54■□□□□ 0.24
NPC1L1-203ENST00000423141 HGH1Q9BTY7 390 aa16.54■□□□□ 0.24
NPC1L1-203ENST00000423141 AIG1Q9NVV5 245 aa16.54■□□□□ 0.24
NPC1L1-203ENST00000423141 G3V2T6 193 aa16.53■□□□□ 0.24
NPC1L1-203ENST00000423141 SLC1A7O00341 560 aa16.53■□□□□ 0.24
NPC1L1-203ENST00000423141 MATN3O15232 486 aa16.53■□□□□ 0.24
NPC1L1-203ENST00000423141 SLC22A3O75751 556 aa16.53■□□□□ 0.24
NPC1L1-203ENST00000423141 POLR2JP52435 117 aaKnown RBP16.53■□□□□ 0.24
NPC1L1-203ENST00000423141 SLC13A2Q13183 592 aa16.53■□□□□ 0.24
NPC1L1-203ENST00000423141 AAK1Q2M2I8 961 aa16.53■□□□□ 0.24
NPC1L1-203ENST00000423141 CATSPEREQ5SY80 951 aa16.53■□□□□ 0.24
NPC1L1-203ENST00000423141 ENPP6Q6UWR7 440 aa16.53■□□□□ 0.24
NPC1L1-203ENST00000423141 ZDHHC13Q8IUH4 622 aa16.53■□□□□ 0.24
NPC1L1-203ENST00000423141 ITFG1Q8TB96 612 aa16.53■□□□□ 0.24
NPC1L1-203ENST00000423141 GLMNQ92990 594 aa16.53■□□□□ 0.24
NPC1L1-203ENST00000423141 PGAP3Q96FM1 320 aaPredicted RBP16.53■□□□□ 0.24
NPC1L1-203ENST00000423141 NODALQ96S42 347 aa16.53■□□□□ 0.24
NPC1L1-203ENST00000423141 CTRCQ99895 268 aa16.53■□□□□ 0.24
NPC1L1-203ENST00000423141 TXNRD2Q9NNW7 524 aa16.53■□□□□ 0.24
NPC1L1-203ENST00000423141 AASSQ9UDR5 926 aa16.53■□□□□ 0.24
NPC1L1-203ENST00000423141 LEF1Q9UJU2 399 aaPredicted RBP16.53■□□□□ 0.24
NPC1L1-203ENST00000423141 ERVK-11Q9UQG0 969 aa16.53■□□□□ 0.24
NPC1L1-203ENST00000423141 SNX5Q9Y5X3 404 aa16.53■□□□□ 0.24
NPC1L1-203ENST00000423141 MAXP61244 160 aa16.53■□□□□ 0.24
NPC1L1-203ENST00000423141 CCNA1P78396 465 aa16.53■□□□□ 0.24
NPC1L1-203ENST00000423141 EMX1Q04741 257 aaPredicted RBP16.53■□□□□ 0.24
NPC1L1-203ENST00000423141 EMX2Q04743 252 aa16.53■□□□□ 0.24
NPC1L1-203ENST00000423141 PTPRCAPQ14761 206 aa16.53■□□□□ 0.24
NPC1L1-203ENST00000423141 FXNQ16595 210 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms