RNA–Protein interactions for RNA: ENST00000422991.1

COL7A1-202, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-202ENST00000422991 UNC5BQ8IZJ1 945 aa16.82■□□□□ 0.28
COL7A1-202ENST00000422991 OR56A4Q8NGH8 313 aa16.82■□□□□ 0.28
COL7A1-202ENST00000422991 GDAP1Q8TB36 358 aa16.82■□□□□ 0.28
COL7A1-202ENST00000422991 OR1E3Q8WZA6 343 aa16.82■□□□□ 0.28
COL7A1-202ENST00000422991 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.82■□□□□ 0.28
COL7A1-202ENST00000422991 PDXPQ96GD0 296 aa16.82■□□□□ 0.28
COL7A1-202ENST00000422991 C9orf72Q96LT7 481 aa16.82■□□□□ 0.28
COL7A1-202ENST00000422991 PARD6AQ9NPB6 346 aa16.82■□□□□ 0.28
COL7A1-202ENST00000422991 C20orf96Q9NUD7 363 aaPredicted RBP16.82■□□□□ 0.28
COL7A1-202ENST00000422991 VPS18Q9P253 973 aa16.82■□□□□ 0.28
COL7A1-202ENST00000422991 KLQ9UEF7 1012 aa16.82■□□□□ 0.28
COL7A1-202ENST00000422991 TMEM98Q9Y2Y6 226 aa16.82■□□□□ 0.28
COL7A1-202ENST00000422991 IGLV3-16A0A075B6K0 115 aa16.81■□□□□ 0.28
COL7A1-202ENST00000422991 LNP1A1A4G5 178 aa16.81■□□□□ 0.28
COL7A1-202ENST00000422991 PRSS38A1L453 326 aa16.81■□□□□ 0.28
COL7A1-202ENST00000422991 GOLGA8KD6RF30 607 aa16.81■□□□□ 0.28
COL7A1-202ENST00000422991 GOLGA8TH3BQL2 631 aa16.81■□□□□ 0.28
COL7A1-202ENST00000422991 CD3EAPO15446 510 aaKnown RBP16.81■□□□□ 0.28
COL7A1-202ENST00000422991 MTX2O75431 263 aa16.81■□□□□ 0.28
COL7A1-202ENST00000422991 SYPP08247 313 aa16.81■□□□□ 0.28
COL7A1-202ENST00000422991 ENGP17813 658 aa16.81■□□□□ 0.28
COL7A1-202ENST00000422991 TGM1P22735 817 aa16.81■□□□□ 0.28
COL7A1-202ENST00000422991 POLD2P49005 469 aa16.81■□□□□ 0.28
COL7A1-202ENST00000422991 SF3A2Q15428 464 aaKnown RBP16.81■□□□□ 0.28
COL7A1-202ENST00000422991 CSRP2Q16527 193 aa16.81■□□□□ 0.28
COL7A1-202ENST00000422991 ZNF423Q2M1K9 1284 aa16.81■□□□□ 0.28
COL7A1-202ENST00000422991 AARS2Q5JTZ9 985 aaKnown RBP16.81■□□□□ 0.28
COL7A1-202ENST00000422991 NEPROQ6NW34 567 aa16.81■□□□□ 0.28
COL7A1-202ENST00000422991 IL27RAQ6UWB1 636 aa16.81■□□□□ 0.28
COL7A1-202ENST00000422991 ENPP7Q6UWV6 458 aa16.81■□□□□ 0.28
COL7A1-202ENST00000422991 ADGRG6Q86SQ4 1221 aa16.81■□□□□ 0.28
COL7A1-202ENST00000422991 KCNMB4Q86W47 210 aa16.81■□□□□ 0.28
COL7A1-202ENST00000422991 GPR150Q8NGU9 434 aa16.81■□□□□ 0.28
COL7A1-202ENST00000422991 GSDMBQ8TAX9 411 aa16.81■□□□□ 0.28
COL7A1-202ENST00000422991 CCDC97Q96F63 343 aaPredicted RBP16.81■□□□□ 0.28
COL7A1-202ENST00000422991 SCARF2Q96GP6 870 aaPredicted RBP16.81■□□□□ 0.28
COL7A1-202ENST00000422991 COPS8Q99627 209 aa16.81■□□□□ 0.28
COL7A1-202ENST00000422991 ZCCHC2Q9C0B9 1178 aaKnown RBP16.81■□□□□ 0.28
COL7A1-202ENST00000422991 OR2AG1Q9H205 316 aa16.81■□□□□ 0.28
COL7A1-202ENST00000422991 TRIM39Q9HCM9 518 aa16.81■□□□□ 0.28
COL7A1-202ENST00000422991 SEMA4GQ9NTN9 838 aa16.81■□□□□ 0.28
COL7A1-202ENST00000422991 ZDHHC3Q9NYG2 299 aa16.81■□□□□ 0.28
COL7A1-202ENST00000422991 ATXN10Q9UBB4 475 aa16.81■□□□□ 0.28
COL7A1-202ENST00000422991 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.81■□□□□ 0.28
COL7A1-202ENST00000422991 DCHS1Q96JQ0 3298 aa16.81■□□□□ 0.28
COL7A1-202ENST00000422991 GPR89AB7ZAQ6 455 aa16.8■□□□□ 0.28
COL7A1-202ENST00000422991 VEGFDO43915 354 aa16.8■□□□□ 0.28
COL7A1-202ENST00000422991 ASMTLO95671 621 aa16.8■□□□□ 0.28
COL7A1-202ENST00000422991 IVLP07476 585 aa16.8■□□□□ 0.28
COL7A1-202ENST00000422991 GSTA2P09210 222 aa16.8■□□□□ 0.28
COL7A1-202ENST00000422991 GPR89BP0CG08 455 aa16.8■□□□□ 0.28
COL7A1-202ENST00000422991 NME1P15531 152 aaKnown RBP16.8■□□□□ 0.28
COL7A1-202ENST00000422991 AKT1P31749 480 aa16.8■□□□□ 0.28
COL7A1-202ENST00000422991 GPX6P59796 221 aa16.8■□□□□ 0.28
COL7A1-202ENST00000422991 SRP54P61011 504 aaKnown RBP16.8■□□□□ 0.28
COL7A1-202ENST00000422991 VSNL1P62760 191 aa16.8■□□□□ 0.28
COL7A1-202ENST00000422991 B4GALNT1Q00973 533 aa16.8■□□□□ 0.28
COL7A1-202ENST00000422991 TYSND1Q2T9J0 566 aa16.8■□□□□ 0.28
COL7A1-202ENST00000422991 HLA-BQ31612 363 aa16.8■□□□□ 0.28
COL7A1-202ENST00000422991 LYPLAL1Q5VWZ2 237 aa16.8■□□□□ 0.28
COL7A1-202ENST00000422991 ZNF470Q6ECI4 717 aa16.8■□□□□ 0.28
COL7A1-202ENST00000422991 MRNIPQ6NTE8 343 aa16.8■□□□□ 0.28
COL7A1-202ENST00000422991 TRMT10BQ6PF06 316 aaKnown RBP16.8■□□□□ 0.28
COL7A1-202ENST00000422991 PACS1Q6VY07 963 aa16.8■□□□□ 0.28
COL7A1-202ENST00000422991 CERS6Q6ZMG9 384 aa16.8■□□□□ 0.28
COL7A1-202ENST00000422991 PALM2Q8IXS6 379 aa16.8■□□□□ 0.28
COL7A1-202ENST00000422991 OXR1Q8N573 874 aa16.8■□□□□ 0.28
COL7A1-202ENST00000422991 OTUD6BQ8N6M0 293 aa16.8■□□□□ 0.28
COL7A1-202ENST00000422991 PNPLA1Q8N8W4 532 aa16.8■□□□□ 0.28
COL7A1-202ENST00000422991 HEXDCQ8WVB3 486 aa16.8■□□□□ 0.28
COL7A1-202ENST00000422991 TSACCQ96A04 125 aaPredicted RBP16.8■□□□□ 0.28
COL7A1-202ENST00000422991 CERS2Q96G23 380 aa16.8■□□□□ 0.28
COL7A1-202ENST00000422991 FAM167BQ9BTA0 163 aa16.8■□□□□ 0.28
COL7A1-202ENST00000422991 MRPL40Q9NQ50 206 aaKnown RBP16.8■□□□□ 0.28
COL7A1-202ENST00000422991 KLF15Q9UIH9 416 aa16.8■□□□□ 0.28
COL7A1-202ENST00000422991 DGKBQ9Y6T7 804 aa16.8■□□□□ 0.28
COL7A1-202ENST00000422991 CHUKO15111 745 aa16.79■□□□□ 0.28
COL7A1-202ENST00000422991 DNAJC6O75061 913 aa16.79■□□□□ 0.28
COL7A1-202ENST00000422991 RASGRP1O95267 797 aa16.79■□□□□ 0.28
COL7A1-202ENST00000422991 CER1O95813 267 aa16.79■□□□□ 0.28
COL7A1-202ENST00000422991 FUCA1P04066 466 aa16.79■□□□□ 0.28
COL7A1-202ENST00000422991 CSF2P04141 144 aa16.79■□□□□ 0.28
COL7A1-202ENST00000422991 FAM153BP0C7A2 387 aa16.79■□□□□ 0.28
COL7A1-202ENST00000422991 ERVK-10P10266 1014 aa16.79■□□□□ 0.28
COL7A1-202ENST00000422991 ZNF8P17098 575 aaPredicted RBP16.79■□□□□ 0.28
COL7A1-202ENST00000422991 MSH3P20585 1137 aa16.79■□□□□ 0.28
COL7A1-202ENST00000422991 OGNP20774 298 aaKnown RBP16.79■□□□□ 0.28
COL7A1-202ENST00000422991 SSTR1P30872 391 aa16.79■□□□□ 0.28
COL7A1-202ENST00000422991 ID4P47928 161 aa16.79■□□□□ 0.28
COL7A1-202ENST00000422991 TTPAP49638 278 aa16.79■□□□□ 0.28
COL7A1-202ENST00000422991 HK3P52790 923 aa16.79■□□□□ 0.28
COL7A1-202ENST00000422991 PPARDQ03181 441 aa16.79■□□□□ 0.28
COL7A1-202ENST00000422991 TMEM115Q12893 351 aaPredicted RBP16.79■□□□□ 0.28
COL7A1-202ENST00000422991 THOC5Q13769 683 aaKnown RBP16.79■□□□□ 0.28
COL7A1-202ENST00000422991 ITIH4Q14624 930 aa16.79■□□□□ 0.28
COL7A1-202ENST00000422991 FAM153CQ494X1 144 aa16.79■□□□□ 0.28
COL7A1-202ENST00000422991 HSP90AA5PQ58FG0 334 aa16.79■□□□□ 0.28
COL7A1-202ENST00000422991 ZNF542PQ5EBM4 170 aa16.79■□□□□ 0.28
COL7A1-202ENST00000422991 WDR93Q6P2C0 686 aa16.79■□□□□ 0.28
COL7A1-202ENST00000422991 CAPN12Q6ZSI9 719 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms