RNA–Protein interactions for RNA: ENST00000422544.2

PDGFC-202, Transcript of platelet derived growth factor C, humanhuman

TSL 5 BASIC

Gene PDGFC, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-202ENST00000422544 TM7SF3Q9NS93 570 aa9.19□□□□□ -0.94
PDGFC-202ENST00000422544 TREX1Q9NSU2 369 aa9.19□□□□□ -0.94
PDGFC-202ENST00000422544 DNAAF2Q9NVR5 837 aaKnown RBP9.19□□□□□ -0.94
PDGFC-202ENST00000422544 GRHL1Q9NZI5 618 aa9.19□□□□□ -0.94
PDGFC-202ENST00000422544 ATXN10Q9UBB4 475 aa9.19□□□□□ -0.94
PDGFC-202ENST00000422544 RIMKLBQ9ULI2 386 aa9.19□□□□□ -0.94
PDGFC-202ENST00000422544 SOX13Q9UN79 622 aa9.19□□□□□ -0.94
PDGFC-202ENST00000422544 SLC17A4Q9Y2C5 497 aa9.19□□□□□ -0.94
PDGFC-202ENST00000422544 SLC30A1Q9Y6M5 507 aa9.19□□□□□ -0.94
PDGFC-202ENST00000422544 TNRC6BQ9UPQ9 1833 aaKnown RBP9.19□□□□□ -0.94
PDGFC-202ENST00000422544 PLXNA2O75051 1894 aa9.19□□□□□ -0.94
PDGFC-202ENST00000422544 PRSS38A1L453 326 aa9.18□□□□□ -0.94
PDGFC-202ENST00000422544 H7C0S8 307 aa9.18□□□□□ -0.94
PDGFC-202ENST00000422544 TNFRSF10CO14798 259 aa9.18□□□□□ -0.94
PDGFC-202ENST00000422544 RASGRP1O95267 797 aa9.18□□□□□ -0.94
PDGFC-202ENST00000422544 GOT2P00505 430 aaKnown RBP9.18□□□□□ -0.94
PDGFC-202ENST00000422544 TNFP01375 233 aa9.18□□□□□ -0.94
PDGFC-202ENST00000422544 NME1P15531 152 aaKnown RBP9.18□□□□□ -0.94
PDGFC-202ENST00000422544 ZNF8P17098 575 aaPredicted RBP9.18□□□□□ -0.94
PDGFC-202ENST00000422544 ITGALP20701 1170 aa9.18□□□□□ -0.94
PDGFC-202ENST00000422544 GNPDA1P46926 289 aa9.18□□□□□ -0.94
PDGFC-202ENST00000422544 CCT8P50990 548 aa9.18□□□□□ -0.94
PDGFC-202ENST00000422544 HK3P52790 923 aa9.18□□□□□ -0.94
PDGFC-202ENST00000422544 DRG2P55039 364 aaKnown RBP9.18□□□□□ -0.94
PDGFC-202ENST00000422544 ARL4CP56559 192 aa9.18□□□□□ -0.94
PDGFC-202ENST00000422544 PRAMEP78395 509 aa9.18□□□□□ -0.94
PDGFC-202ENST00000422544 ACVR1Q04771 509 aa9.18□□□□□ -0.94
PDGFC-202ENST00000422544 CACNG1Q06432 222 aa9.18□□□□□ -0.94
PDGFC-202ENST00000422544 TMEM115Q12893 351 aaPredicted RBP9.18□□□□□ -0.94
PDGFC-202ENST00000422544 C1orf61Q13536 156 aa9.18□□□□□ -0.94
PDGFC-202ENST00000422544 ITGA9Q13797 1035 aa9.18□□□□□ -0.94
PDGFC-202ENST00000422544 TCEA2Q15560 299 aa9.18□□□□□ -0.94
PDGFC-202ENST00000422544 LRRK1Q38SD2 2015 aa9.18□□□□□ -0.94
PDGFC-202ENST00000422544 ANKRD20A4Q4UJ75 823 aa9.18□□□□□ -0.94
PDGFC-202ENST00000422544 GLE1Q53GS7 698 aaKnown RBP9.18□□□□□ -0.94
PDGFC-202ENST00000422544 GPRC6AQ5T6X5 926 aa9.18□□□□□ -0.94
PDGFC-202ENST00000422544 STPG1Q5TH74 334 aa9.18□□□□□ -0.94
PDGFC-202ENST00000422544 TAS2R42Q7RTR8 314 aa9.18□□□□□ -0.94
PDGFC-202ENST00000422544 SNX20Q7Z614 316 aa9.18□□□□□ -0.94
PDGFC-202ENST00000422544 ADGRG6Q86SQ4 1221 aa9.18□□□□□ -0.94
PDGFC-202ENST00000422544 GATAD2AQ86YP4 633 aa9.18□□□□□ -0.94
PDGFC-202ENST00000422544 PHYKPLQ8IUZ5 450 aa9.18□□□□□ -0.94
PDGFC-202ENST00000422544 IGDCC3Q8IVU1 814 aa9.18□□□□□ -0.94
PDGFC-202ENST00000422544 PIANPQ8IYJ0 282 aa9.18□□□□□ -0.94
PDGFC-202ENST00000422544 OXR1Q8N573 874 aa9.18□□□□□ -0.94
PDGFC-202ENST00000422544 PNPLA1Q8N8W4 532 aa9.18□□□□□ -0.94
PDGFC-202ENST00000422544 LMX1AQ8TE12 382 aa9.18□□□□□ -0.94
PDGFC-202ENST00000422544 PEX13Q92968 403 aa9.18□□□□□ -0.94
PDGFC-202ENST00000422544 ART4Q93070 314 aa9.18□□□□□ -0.94
PDGFC-202ENST00000422544 STAMBPL1Q96FJ0 436 aa9.18□□□□□ -0.94
PDGFC-202ENST00000422544 VPS35Q96QK1 796 aa9.18□□□□□ -0.94
PDGFC-202ENST00000422544 SLC13A1Q9BZW2 595 aa9.18□□□□□ -0.94
PDGFC-202ENST00000422544 OR2AG1Q9H205 316 aa9.18□□□□□ -0.94
PDGFC-202ENST00000422544 CARS2Q9HA77 564 aaKnown RBP9.18□□□□□ -0.94
PDGFC-202ENST00000422544 SMOXQ9NWM0 555 aa9.18□□□□□ -0.94
PDGFC-202ENST00000422544 UCKL1Q9NWZ5 548 aa9.18□□□□□ -0.94
PDGFC-202ENST00000422544 SAMD15Q9P1V8 674 aa9.18□□□□□ -0.94
PDGFC-202ENST00000422544 DMGDHQ9UI17 866 aaKnown RBP9.18□□□□□ -0.94
PDGFC-202ENST00000422544 CRLS1Q9UJA2 301 aa9.18□□□□□ -0.94
PDGFC-202ENST00000422544 SUFUQ9UMX1 484 aa9.18□□□□□ -0.94
PDGFC-202ENST00000422544 PRKAB1Q9Y478 270 aa9.18□□□□□ -0.94
PDGFC-202ENST00000422544 PCYT1BQ9Y5K3 369 aaPredicted RBP9.18□□□□□ -0.94
PDGFC-202ENST00000422544 DGKBQ9Y6T7 804 aa9.18□□□□□ -0.94
PDGFC-202ENST00000422544 KALRNO60229 2985 aa9.18□□□□□ -0.94
PDGFC-202ENST00000422544 CABIN1Q9Y6J0 2220 aa9.17□□□□□ -0.94
PDGFC-202ENST00000422544 FAM237BA0A1B0GVD1 139 aa9.17□□□□□ -0.94
PDGFC-202ENST00000422544 AGAP14A8MT82 685 aa9.17□□□□□ -0.94
PDGFC-202ENST00000422544 GOLGA8KD6RF30 607 aa9.17□□□□□ -0.94
PDGFC-202ENST00000422544 H3BM21 787 aa9.17□□□□□ -0.94
PDGFC-202ENST00000422544 GOLGA8TH3BQL2 631 aa9.17□□□□□ -0.94
PDGFC-202ENST00000422544 NDC80O14777 642 aa9.17□□□□□ -0.94
PDGFC-202ENST00000422544 DNAJC6O75061 913 aa9.17□□□□□ -0.94
PDGFC-202ENST00000422544 PIAS2O75928 621 aa9.17□□□□□ -0.94
PDGFC-202ENST00000422544 CDK14O94921 469 aa9.17□□□□□ -0.94
PDGFC-202ENST00000422544 VAPBO95292 243 aa9.17□□□□□ -0.94
PDGFC-202ENST00000422544 IVLP07476 585 aa9.17□□□□□ -0.94
PDGFC-202ENST00000422544 RHOXF2BP0C7M4 288 aa9.17□□□□□ -0.94
PDGFC-202ENST00000422544 CTSEP14091 401 aa9.17□□□□□ -0.94
PDGFC-202ENST00000422544 DGKAP23743 735 aa9.17□□□□□ -0.94
PDGFC-202ENST00000422544 ARNTP27540 789 aa9.17□□□□□ -0.94
PDGFC-202ENST00000422544 EPHA8P29322 1005 aaPredicted RBP9.17□□□□□ -0.94
PDGFC-202ENST00000422544 FOXN2P32314 431 aa9.17□□□□□ -0.94
PDGFC-202ENST00000422544 ELK3P41970 407 aa9.17□□□□□ -0.94
PDGFC-202ENST00000422544 BLKP51451 505 aa9.17□□□□□ -0.94
PDGFC-202ENST00000422544 HNRNPKP61978 463 aaKnown RBP eCLIP9.17□□□□□ -0.94
PDGFC-202ENST00000422544 PDIA2Q13087 525 aaKnown RBP9.17□□□□□ -0.94
PDGFC-202ENST00000422544 SMAD1Q15797 465 aaKnown RBP9.17□□□□□ -0.94
PDGFC-202ENST00000422544 HIF1AQ16665 826 aa9.17□□□□□ -0.94
PDGFC-202ENST00000422544 GPR33Q49SQ1 333 aa9.17□□□□□ -0.94
PDGFC-202ENST00000422544 PRRT3Q5FWE3 981 aa9.17□□□□□ -0.94
PDGFC-202ENST00000422544 LDLRAP1Q5SW96 308 aa9.17□□□□□ -0.94
PDGFC-202ENST00000422544 ARMC3Q5W041 872 aa9.17□□□□□ -0.94
PDGFC-202ENST00000422544 PSAPL1Q6NUJ1 521 aa9.17□□□□□ -0.94
PDGFC-202ENST00000422544 AFTPHQ6ULP2 937 aa9.17□□□□□ -0.94
PDGFC-202ENST00000422544 ZDHHC24Q6UX98 284 aa9.17□□□□□ -0.94
PDGFC-202ENST00000422544 TMEM135Q86UB9 458 aa9.17□□□□□ -0.94
PDGFC-202ENST00000422544 SERPINA9Q86WD7 417 aa9.17□□□□□ -0.94
PDGFC-202ENST00000422544 NXPE1Q8N323 547 aa9.17□□□□□ -0.94
PDGFC-202ENST00000422544 SLC25A45Q8N413 288 aa9.17□□□□□ -0.94
PDGFC-202ENST00000422544 RASGEF1AQ8N9B8 481 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms