RNA–Protein interactions for RNA: ENST00000422074.2

LINC00397-201, long intergenic non-protein coding RNA 397, humanhuman

TSL 3 BASIC

Gene LINC00397, Length 344 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-201ENST00000422074 NEUROD6Q96NK8 337 aa3.77□□□□□ -1.81
LINC00397-201ENST00000422074 BARHL1Q9BZE3 327 aa3.77□□□□□ -1.81
LINC00397-201ENST00000422074 PDZD7Q9H5P4 517 aa3.77□□□□□ -1.81
LINC00397-201ENST00000422074 TFB2MQ9H5Q4 396 aaKnown RBP3.77□□□□□ -1.81
LINC00397-201ENST00000422074 SLC28A3Q9HAS3 691 aa3.77□□□□□ -1.81
LINC00397-201ENST00000422074 DDX43Q9NXZ2 648 aaKnown RBP3.77□□□□□ -1.81
LINC00397-201ENST00000422074 GTF2A1LQ9UNN4 478 aa3.77□□□□□ -1.81
LINC00397-201ENST00000422074 MAU2Q9Y6X3 613 aa3.77□□□□□ -1.81
LINC00397-201ENST00000422074 A0A1W2PPI3 338 aa3.76□□□□□ -1.81
LINC00397-201ENST00000422074 ANKRD66B4E2M5 251 aa3.76□□□□□ -1.81
LINC00397-201ENST00000422074 WISP2O76076 250 aa3.76□□□□□ -1.81
LINC00397-201ENST00000422074 PATE4P0C8F1 98 aa3.76□□□□□ -1.81
LINC00397-201ENST00000422074 ELF1P32519 619 aa3.76□□□□□ -1.81
LINC00397-201ENST00000422074 AMPHP49418 695 aa3.76□□□□□ -1.81
LINC00397-201ENST00000422074 RARSP54136 660 aaKnown RBP3.76□□□□□ -1.81
LINC00397-201ENST00000422074 MLLT10P55197 1068 aa3.76□□□□□ -1.81
LINC00397-201ENST00000422074 ERVK11-1P61568 191 aa3.76□□□□□ -1.81
LINC00397-201ENST00000422074 MRPS34P82930 218 aaKnown RBP3.76□□□□□ -1.81
LINC00397-201ENST00000422074 KIR2DS3Q14952 304 aa3.76□□□□□ -1.81
LINC00397-201ENST00000422074 ATF7IPQ6VMQ6 1270 aa3.76□□□□□ -1.81
LINC00397-201ENST00000422074 TSPAN33Q86UF1 283 aa3.76□□□□□ -1.81
LINC00397-201ENST00000422074 KRTAP7-1Q8IUC3 87 aa3.76□□□□□ -1.81
LINC00397-201ENST00000422074 RNF168Q8IYW5 571 aaPredicted RBP3.76□□□□□ -1.81
LINC00397-201ENST00000422074 TMEM116Q8NCL8 245 aa3.76□□□□□ -1.81
LINC00397-201ENST00000422074 OR1J2Q8NGS2 313 aa3.76□□□□□ -1.81
LINC00397-201ENST00000422074 SLC44A1Q8WWI5 657 aa3.76□□□□□ -1.81
LINC00397-201ENST00000422074 TMEM190Q8WZ59 177 aa3.76□□□□□ -1.81
LINC00397-201ENST00000422074 RFFLQ8WZ73 363 aa3.76□□□□□ -1.81
LINC00397-201ENST00000422074 PHF21AQ96BD5 680 aa3.76□□□□□ -1.81
LINC00397-201ENST00000422074 LRMDAQ9H2I8 198 aa3.76□□□□□ -1.81
LINC00397-201ENST00000422074 MARCH4Q9P2E8 410 aaPredicted RBP3.76□□□□□ -1.81
LINC00397-201ENST00000422074 ZNF624Q9P2J8 865 aaPredicted RBP3.76□□□□□ -1.81
LINC00397-201ENST00000422074 CLIC4Q9Y696 253 aa3.76□□□□□ -1.81
LINC00397-201ENST00000422074 A0A1W2PPH5 198 aa3.75□□□□□ -1.81
LINC00397-201ENST00000422074 KANSL1LA0AUZ9 987 aa3.75□□□□□ -1.81
LINC00397-201ENST00000422074 C1orf226A1L170 272 aa3.75□□□□□ -1.81
LINC00397-201ENST00000422074 SMIM1B2RUZ4 78 aa3.75□□□□□ -1.81
LINC00397-201ENST00000422074 HCRTR2O43614 444 aa3.75□□□□□ -1.81
LINC00397-201ENST00000422074 BUD23O43709 281 aaKnown RBP3.75□□□□□ -1.81
LINC00397-201ENST00000422074 TMEM63AO94886 807 aa3.75□□□□□ -1.81
LINC00397-201ENST00000422074 ERVK-10P10266 1014 aa3.75□□□□□ -1.81
LINC00397-201ENST00000422074 BSGP35613 385 aa3.75□□□□□ -1.81
LINC00397-201ENST00000422074 PRCPP42785 496 aa3.75□□□□□ -1.81
LINC00397-201ENST00000422074 NR2C2P49116 596 aa3.75□□□□□ -1.81
LINC00397-201ENST00000422074 F2RL1P55085 397 aa3.75□□□□□ -1.81
LINC00397-201ENST00000422074 CASP6P55212 293 aa3.75□□□□□ -1.81
LINC00397-201ENST00000422074 COG7P83436 770 aa3.75□□□□□ -1.81
LINC00397-201ENST00000422074 ACVR2BQ13705 512 aa3.75□□□□□ -1.81
LINC00397-201ENST00000422074 PNLIPRP3Q17RR3 467 aa3.75□□□□□ -1.81
LINC00397-201ENST00000422074 ZNF876PQ49A33 203 aa3.75□□□□□ -1.81
LINC00397-201ENST00000422074 C14orf177Q52M58 125 aa3.75□□□□□ -1.81
LINC00397-201ENST00000422074 ZNF805Q5CZA5 627 aa3.75□□□□□ -1.81
LINC00397-201ENST00000422074 TECRLQ5HYJ1 363 aa3.75□□□□□ -1.81
LINC00397-201ENST00000422074 WDR38Q5JTN6 314 aa3.75□□□□□ -1.81
LINC00397-201ENST00000422074 INTS11Q5TA45 600 aaKnown RBP3.75□□□□□ -1.81
LINC00397-201ENST00000422074 SFMBT2Q5VUG0 894 aa3.75□□□□□ -1.81
LINC00397-201ENST00000422074 NSUN5P2Q63ZY6 315 aa3.75□□□□□ -1.81
LINC00397-201ENST00000422074 ARHGAP11AQ6P4F7 1023 aa3.75□□□□□ -1.81
LINC00397-201ENST00000422074 PLXDC2Q6UX71 529 aa3.75□□□□□ -1.81
LINC00397-201ENST00000422074 SEPT14Q6ZU15 432 aa3.75□□□□□ -1.81
LINC00397-201ENST00000422074 R3HCC1LQ7Z5L2 792 aaKnown RBP3.75□□□□□ -1.81
LINC00397-201ENST00000422074 APLFQ8IW19 511 aaPredicted RBP3.75□□□□□ -1.81
LINC00397-201ENST00000422074 RBM15BQ8NDT2 890 aaKnown RBP3.75□□□□□ -1.81
LINC00397-201ENST00000422074 TM9SF4Q92544 642 aa3.75□□□□□ -1.81
LINC00397-201ENST00000422074 C2orf42Q9NWW7 574 aa3.75□□□□□ -1.81
LINC00397-201ENST00000422074 COPG2Q9UBF2 871 aa3.75□□□□□ -1.81
LINC00397-201ENST00000422074 STK39Q9UEW8 545 aa3.75□□□□□ -1.81
LINC00397-201ENST00000422074 FBXW11Q9UKB1 542 aa3.75□□□□□ -1.81
LINC00397-201ENST00000422074 ACAD8Q9UKU7 415 aa3.75□□□□□ -1.81
LINC00397-201ENST00000422074 A0A0G2JNG1 304 aa3.74□□□□□ -1.81
LINC00397-201ENST00000422074 ATP2A1O14983 1001 aa3.74□□□□□ -1.81
LINC00397-201ENST00000422074 IPO7O95373 1038 aaKnown RBP3.74□□□□□ -1.81
LINC00397-201ENST00000422074 GNB1P62873 340 aa3.74□□□□□ -1.81
LINC00397-201ENST00000422074 FRG1Q14331 258 aaKnown RBP3.74□□□□□ -1.81
LINC00397-201ENST00000422074 KIR2DS5Q14953 304 aa3.74□□□□□ -1.81
LINC00397-201ENST00000422074 DGLUCYQ7Z3D6 616 aa3.74□□□□□ -1.81
LINC00397-201ENST00000422074 NOTCH2NLQ7Z3S9 236 aa3.74□□□□□ -1.81
LINC00397-201ENST00000422074 PIWIL4Q7Z3Z4 852 aaKnown RBP3.74□□□□□ -1.81
LINC00397-201ENST00000422074 HACE1Q8IYU2 909 aa3.74□□□□□ -1.81
LINC00397-201ENST00000422074 CNTROBQ8N137 903 aa3.74□□□□□ -1.81
LINC00397-201ENST00000422074 ADSSL1Q8N142 457 aa3.74□□□□□ -1.81
LINC00397-201ENST00000422074 GCSAMQ8N6F7 178 aa3.74□□□□□ -1.81
LINC00397-201ENST00000422074 RDM1Q8NG50 284 aa3.74□□□□□ -1.81
LINC00397-201ENST00000422074 CTCFLQ8NI51 663 aaPredicted RBP3.74□□□□□ -1.81
LINC00397-201ENST00000422074 PERPQ96FX8 193 aa3.74□□□□□ -1.81
LINC00397-201ENST00000422074 EGLN2Q96KS0 407 aa3.74□□□□□ -1.81
LINC00397-201ENST00000422074 NAP1L4Q99733 375 aaKnown RBP3.74□□□□□ -1.81
LINC00397-201ENST00000422074 TMEM39BQ9GZU3 492 aa3.74□□□□□ -1.81
LINC00397-201ENST00000422074 RANGRFQ9HD47 186 aaPredicted RBP3.74□□□□□ -1.81
LINC00397-201ENST00000422074 MTMR10Q9NXD2 777 aa3.74□□□□□ -1.81
LINC00397-201ENST00000422074 C9orf78Q9NZ63 289 aaPredicted RBP3.74□□□□□ -1.81
LINC00397-201ENST00000422074 CWC15Q9P013 229 aaKnown RBP3.74□□□□□ -1.81
LINC00397-201ENST00000422074 KLHL9Q9P2J3 617 aa3.74□□□□□ -1.81
LINC00397-201ENST00000422074 EIF4E1BA6NMX2 242 aaKnown RBP3.73□□□□□ -1.81
LINC00397-201ENST00000422074 SLC25A12O75746 678 aa3.73□□□□□ -1.81
LINC00397-201ENST00000422074 MLYCDO95822 493 aa3.73□□□□□ -1.81
LINC00397-201ENST00000422074 ICAM1P05362 532 aa3.73□□□□□ -1.81
LINC00397-201ENST00000422074 CLEC3BP05452 202 aa3.73□□□□□ -1.81
LINC00397-201ENST00000422074 HOXC8P31273 242 aa3.73□□□□□ -1.81
LINC00397-201ENST00000422074 RGS2P41220 211 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms