RNA–Protein interactions for RNA: ENST00000421378.2

LINC00271-201, long intergenic non-protein coding RNA 271, humanhuman

TSL 1 (best) BASIC

Gene LINC00271, Length 1,580 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271-201ENST00000421378 GRIK2Q13002 908 aa17.36■□□□□ 0.37
LINC00271-201ENST00000421378 FRG1Q14331 258 aaKnown RBP17.36■□□□□ 0.37
LINC00271-201ENST00000421378 FZD2Q14332 565 aa17.36■□□□□ 0.37
LINC00271-201ENST00000421378 SEMA3AQ14563 771 aa17.36■□□□□ 0.37
LINC00271-201ENST00000421378 NAA30Q147X3 362 aaPredicted RBP17.36■□□□□ 0.37
LINC00271-201ENST00000421378 DBN1Q16643 649 aa17.36■□□□□ 0.37
LINC00271-201ENST00000421378 KHDC1Q4VXA5 237 aaKnown RBP17.36■□□□□ 0.37
LINC00271-201ENST00000421378 ZNF648Q5T619 568 aaPredicted RBP17.36■□□□□ 0.37
LINC00271-201ENST00000421378 LYPLAL1Q5VWZ2 237 aa17.36■□□□□ 0.37
LINC00271-201ENST00000421378 SDCCAG8Q86SQ7 713 aaPredicted RBP17.36■□□□□ 0.37
LINC00271-201ENST00000421378 LMNTD2Q8IXW0 634 aa17.36■□□□□ 0.37
LINC00271-201ENST00000421378 GPR150Q8NGU9 434 aa17.36■□□□□ 0.37
LINC00271-201ENST00000421378 GABPB2Q8TAK5 448 aaPredicted RBP17.36■□□□□ 0.37
LINC00271-201ENST00000421378 VPS37BQ9H9H4 285 aa17.36■□□□□ 0.37
LINC00271-201ENST00000421378 FGF22Q9HCT0 170 aa17.36■□□□□ 0.37
LINC00271-201ENST00000421378 KLQ9UEF7 1012 aa17.36■□□□□ 0.37
LINC00271-201ENST00000421378 SLC17A4Q9Y2C5 497 aa17.36■□□□□ 0.37
LINC00271-201ENST00000421378 TP53BP1Q12888 1972 aaPredicted RBP17.36■□□□□ 0.37
LINC00271-201ENST00000421378 TCRBV9S1A1TA0A576 114 aa17.35■□□□□ 0.37
LINC00271-201ENST00000421378 PRSS38A1L453 326 aa17.35■□□□□ 0.37
LINC00271-201ENST00000421378 GPR89AB7ZAQ6 455 aa17.35■□□□□ 0.37
LINC00271-201ENST00000421378 CFAP99D6REC4 459 aa17.35■□□□□ 0.37
LINC00271-201ENST00000421378 TNFRSF10CO14798 259 aa17.35■□□□□ 0.37
LINC00271-201ENST00000421378 VEGFDO43915 354 aa17.35■□□□□ 0.37
LINC00271-201ENST00000421378 CEACAM5P06731 702 aa17.35■□□□□ 0.37
LINC00271-201ENST00000421378 GPR89BP0CG08 455 aa17.35■□□□□ 0.37
LINC00271-201ENST00000421378 RALBP11234 206 aa17.35■□□□□ 0.37
LINC00271-201ENST00000421378 MSH3P20585 1137 aa17.35■□□□□ 0.37
LINC00271-201ENST00000421378 OGNP20774 298 aaKnown RBP17.35■□□□□ 0.37
LINC00271-201ENST00000421378 CTSKP43235 329 aa17.35■□□□□ 0.37
LINC00271-201ENST00000421378 GPX6P59796 221 aa17.35■□□□□ 0.37
LINC00271-201ENST00000421378 TMEM115Q12893 351 aaPredicted RBP17.35■□□□□ 0.37
LINC00271-201ENST00000421378 KYNUQ16719 465 aa17.35■□□□□ 0.37
LINC00271-201ENST00000421378 TCEAL6Q6IPX3 200 aa17.35■□□□□ 0.37
LINC00271-201ENST00000421378 ADGRG6Q86SQ4 1221 aa17.35■□□□□ 0.37
LINC00271-201ENST00000421378 LDB1Q86U70 411 aaPredicted RBP17.35■□□□□ 0.37
LINC00271-201ENST00000421378 CILP2Q8IUL8 1156 aa17.35■□□□□ 0.37
LINC00271-201ENST00000421378 PNPLA1Q8N8W4 532 aa17.35■□□□□ 0.37
LINC00271-201ENST00000421378 HEXDCQ8WVB3 486 aa17.35■□□□□ 0.37
LINC00271-201ENST00000421378 TCEAL3Q969E4 200 aa17.35■□□□□ 0.37
LINC00271-201ENST00000421378 PDXPQ96GD0 296 aa17.35■□□□□ 0.37
LINC00271-201ENST00000421378 DCUN1D1Q96GG9 259 aa17.35■□□□□ 0.37
LINC00271-201ENST00000421378 OR2AG1Q9H205 316 aa17.35■□□□□ 0.37
LINC00271-201ENST00000421378 FSCN3Q9NQT6 498 aa17.35■□□□□ 0.37
LINC00271-201ENST00000421378 ZDHHC3Q9NYG2 299 aa17.35■□□□□ 0.37
LINC00271-201ENST00000421378 MOCS1Q9NZB8 636 aa17.35■□□□□ 0.37
LINC00271-201ENST00000421378 NINJ2Q9NZG7 142 aa17.35■□□□□ 0.37
LINC00271-201ENST00000421378 ATXN10Q9UBB4 475 aa17.35■□□□□ 0.37
LINC00271-201ENST00000421378 RAPGEFL1Q9UHV5 662 aa17.35■□□□□ 0.37
LINC00271-201ENST00000421378 MOSPD1Q9UJG1 213 aa17.35■□□□□ 0.37
LINC00271-201ENST00000421378 SNX11Q9Y5W9 270 aa17.35■□□□□ 0.37
LINC00271-201ENST00000421378 IGLV3-16A0A075B6K0 115 aa17.34■□□□□ 0.37
LINC00271-201ENST00000421378 PFDN6O15212 129 aa17.34■□□□□ 0.37
LINC00271-201ENST00000421378 CDK14O94921 469 aa17.34■□□□□ 0.37
LINC00271-201ENST00000421378 SYPP08247 313 aa17.34■□□□□ 0.37
LINC00271-201ENST00000421378 POLD2P49005 469 aa17.34■□□□□ 0.37
LINC00271-201ENST00000421378 SRP54P61011 504 aaKnown RBP17.34■□□□□ 0.37
LINC00271-201ENST00000421378 IRX4P78413 519 aa17.34■□□□□ 0.37
LINC00271-201ENST00000421378 BNC1Q01954 994 aa17.34■□□□□ 0.37
LINC00271-201ENST00000421378 PPARDQ03181 441 aa17.34■□□□□ 0.37
LINC00271-201ENST00000421378 GTF2H3Q13889 308 aa17.34■□□□□ 0.37
LINC00271-201ENST00000421378 ITIH4Q14624 930 aa17.34■□□□□ 0.37
LINC00271-201ENST00000421378 TYSND1Q2T9J0 566 aa17.34■□□□□ 0.37
LINC00271-201ENST00000421378 RNF187Q5TA31 235 aaPredicted RBP17.34■□□□□ 0.37
LINC00271-201ENST00000421378 IL27RAQ6UWB1 636 aa17.34■□□□□ 0.37
LINC00271-201ENST00000421378 MARK2Q7KZI7 788 aaKnown RBP17.34■□□□□ 0.37
LINC00271-201ENST00000421378 DENND6AQ8IWF6 608 aa17.34■□□□□ 0.37
LINC00271-201ENST00000421378 BOCQ9BWV1 1114 aa17.34■□□□□ 0.37
LINC00271-201ENST00000421378 ZDHHC5Q9C0B5 715 aa17.34■□□□□ 0.37
LINC00271-201ENST00000421378 ERVMER34-1Q9H9K5 563 aa17.34■□□□□ 0.37
LINC00271-201ENST00000421378 MRPL40Q9NQ50 206 aaKnown RBP17.34■□□□□ 0.37
LINC00271-201ENST00000421378 IARS2Q9NSE4 1012 aaKnown RBP17.34■□□□□ 0.37
LINC00271-201ENST00000421378 DNAJC28Q9NX36 388 aa17.34■□□□□ 0.37
LINC00271-201ENST00000421378 ZFATQ9P243 1243 aa17.34■□□□□ 0.37
LINC00271-201ENST00000421378 RAB21Q9UL25 225 aa17.34■□□□□ 0.37
LINC00271-201ENST00000421378 PCDH15Q96QU1 1955 aa17.33■□□□□ 0.37
LINC00271-201ENST00000421378 ARHGAP33O14559 1287 aa17.33■□□□□ 0.37
LINC00271-201ENST00000421378 NUAK1O60285 661 aa17.33■□□□□ 0.37
LINC00271-201ENST00000421378 LRP3O75074 770 aa17.33■□□□□ 0.37
LINC00271-201ENST00000421378 NDUFS3O75489 264 aa17.33■□□□□ 0.37
LINC00271-201ENST00000421378 ACSL3O95573 720 aa17.33■□□□□ 0.37
LINC00271-201ENST00000421378 ZNF806P0C7X5 589 aa17.33■□□□□ 0.37
LINC00271-201ENST00000421378 ZNF8P17098 575 aaPredicted RBP17.33■□□□□ 0.37
LINC00271-201ENST00000421378 STX2P32856 288 aa17.33■□□□□ 0.37
LINC00271-201ENST00000421378 PHBP35232 272 aa17.33■□□□□ 0.37
LINC00271-201ENST00000421378 NSG1P42857 185 aa17.33■□□□□ 0.37
LINC00271-201ENST00000421378 SLC1A2P43004 574 aa17.33■□□□□ 0.37
LINC00271-201ENST00000421378 PMS2P54278 862 aa17.33■□□□□ 0.37
LINC00271-201ENST00000421378 B4GALNT1Q00973 533 aa17.33■□□□□ 0.37
LINC00271-201ENST00000421378 MGAT5Q09328 741 aa17.33■□□□□ 0.37
LINC00271-201ENST00000421378 SPEM2Q0P670 501 aa17.33■□□□□ 0.37
LINC00271-201ENST00000421378 EIF2B5Q13144 721 aaKnown RBP17.33■□□□□ 0.37
LINC00271-201ENST00000421378 ALG11Q2TAA5 492 aa17.33■□□□□ 0.37
LINC00271-201ENST00000421378 ZNF542PQ5EBM4 170 aa17.33■□□□□ 0.37
LINC00271-201ENST00000421378 KCTD16Q68DU8 428 aa17.33■□□□□ 0.37
LINC00271-201ENST00000421378 ZNF449Q6P9G9 518 aa17.33■□□□□ 0.37
LINC00271-201ENST00000421378 PACS1Q6VY07 963 aa17.33■□□□□ 0.37
LINC00271-201ENST00000421378 CYS1Q717R9 158 aa17.33■□□□□ 0.37
LINC00271-201ENST00000421378 RD3Q7Z3Z2 195 aa17.33■□□□□ 0.37
LINC00271-201ENST00000421378 CNTN4Q8IWV2 1026 aa17.33■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 322.5 ms