RNA–Protein interactions for RNA: ENST00000419378.5

HMGN1-205, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-205ENST00000419378 RGRP47804 291 aa6.97□□□□□ -1.29
HMGN1-205ENST00000419378 CDKN1CP49918 316 aaPredicted RBP6.97□□□□□ -1.29
HMGN1-205ENST00000419378 ARSEP51690 589 aa6.97□□□□□ -1.29
HMGN1-205ENST00000419378 NXPH1P58417 271 aa6.97□□□□□ -1.29
HMGN1-205ENST00000419378 RPS21P63220 83 aaKnown RBP6.97□□□□□ -1.29
HMGN1-205ENST00000419378 FAM193AP78312 1265 aa6.97□□□□□ -1.29
HMGN1-205ENST00000419378 IL9RQ01113 521 aa6.97□□□□□ -1.29
HMGN1-205ENST00000419378 RAD51Q06609 339 aa6.97□□□□□ -1.29
HMGN1-205ENST00000419378 IL10RBQ08334 325 aa6.97□□□□□ -1.29
HMGN1-205ENST00000419378 DPYSL3Q14195 570 aa6.97□□□□□ -1.29
HMGN1-205ENST00000419378 FGL2Q14314 439 aa6.97□□□□□ -1.29
HMGN1-205ENST00000419378 RFTN1Q14699 578 aaPredicted RBP6.97□□□□□ -1.29
HMGN1-205ENST00000419378 GPR19Q15760 415 aa6.97□□□□□ -1.29
HMGN1-205ENST00000419378 LRRC73Q5JTD7 316 aa6.97□□□□□ -1.29
HMGN1-205ENST00000419378 PRAMEF14Q5SWL7 426 aa6.97□□□□□ -1.29
HMGN1-205ENST00000419378 KIAA1161Q6NSJ0 714 aa6.97□□□□□ -1.29
HMGN1-205ENST00000419378 GCNT7Q6ZNI0 430 aa6.97□□□□□ -1.29
HMGN1-205ENST00000419378 GAS2L3Q86XJ1 694 aa6.97□□□□□ -1.29
HMGN1-205ENST00000419378 PTRH1Q86Y79 214 aaKnown RBP6.97□□□□□ -1.29
HMGN1-205ENST00000419378 KIF18BQ86Y91 864 aa6.97□□□□□ -1.29
HMGN1-205ENST00000419378 SLC35G2Q8TBE7 412 aa6.97□□□□□ -1.29
HMGN1-205ENST00000419378 RFFLQ8WZ73 363 aa6.97□□□□□ -1.29
HMGN1-205ENST00000419378 KLK6Q92876 244 aa6.97□□□□□ -1.29
HMGN1-205ENST00000419378 ELF4Q99607 663 aaPredicted RBP6.97□□□□□ -1.29
HMGN1-205ENST00000419378 ZNF670Q9BS34 389 aa6.97□□□□□ -1.29
HMGN1-205ENST00000419378 CINPQ9BW66 212 aaPredicted RBP6.97□□□□□ -1.29
HMGN1-205ENST00000419378 CALN1Q9BXU9 219 aa6.97□□□□□ -1.29
HMGN1-205ENST00000419378 CPEB1Q9BZB8 566 aaKnown RBP6.97□□□□□ -1.29
HMGN1-205ENST00000419378 SMURF1Q9HCE7 757 aa6.97□□□□□ -1.29
HMGN1-205ENST00000419378 TNFRSF12AQ9NP84 129 aa6.97□□□□□ -1.29
HMGN1-205ENST00000419378 SLC6A20Q9NP91 592 aa6.97□□□□□ -1.29
HMGN1-205ENST00000419378 ZFP64Q9NPA5 681 aa6.97□□□□□ -1.29
HMGN1-205ENST00000419378 FZD3Q9NPG1 666 aa6.97□□□□□ -1.29
HMGN1-205ENST00000419378 GDF3Q9NR23 364 aa6.97□□□□□ -1.29
HMGN1-205ENST00000419378 DKK3Q9UBP4 350 aa6.97□□□□□ -1.29
HMGN1-205ENST00000419378 MCM8Q9UJA3 840 aa6.97□□□□□ -1.29
HMGN1-205ENST00000419378 ZFR2Q9UPR6 939 aaKnown RBP6.97□□□□□ -1.29
HMGN1-205ENST00000419378 CA5BQ9Y2D0 317 aa6.97□□□□□ -1.29
HMGN1-205ENST00000419378 PCDHGB2Q9Y5G2 931 aa6.97□□□□□ -1.29
HMGN1-205ENST00000419378 OAS3Q9Y6K5 1087 aaKnown RBP6.97□□□□□ -1.29
HMGN1-205ENST00000419378 PCNX2A6NKB5 2137 aa6.97□□□□□ -1.29
HMGN1-205ENST00000419378 A0A1B0GTQ1 180 aa6.96□□□□□ -1.3
HMGN1-205ENST00000419378 TSPAN11A1L157 253 aa6.96□□□□□ -1.3
HMGN1-205ENST00000419378 NEMP1O14524 444 aa6.96□□□□□ -1.3
HMGN1-205ENST00000419378 MUSKO15146 869 aa6.96□□□□□ -1.3
HMGN1-205ENST00000419378 YKT6O15498 198 aa6.96□□□□□ -1.3
HMGN1-205ENST00000419378 FLRT2O43155 660 aa6.96□□□□□ -1.3
HMGN1-205ENST00000419378 TSPAN6O43657 245 aa6.96□□□□□ -1.3
HMGN1-205ENST00000419378 MFSD11O43934 449 aa6.96□□□□□ -1.3
HMGN1-205ENST00000419378 PCDHGA12O60330 932 aa6.96□□□□□ -1.3
HMGN1-205ENST00000419378 DFNA5O60443 496 aa6.96□□□□□ -1.3
HMGN1-205ENST00000419378 BUB1BO60566 1050 aaPredicted RBP6.96□□□□□ -1.3
HMGN1-205ENST00000419378 CBFA2T3O75081 653 aa6.96□□□□□ -1.3
HMGN1-205ENST00000419378 LCA5LO95447 670 aa6.96□□□□□ -1.3
HMGN1-205ENST00000419378 DBHP09172 617 aa6.96□□□□□ -1.3
HMGN1-205ENST00000419378 PMLP29590 882 aa6.96□□□□□ -1.3
HMGN1-205ENST00000419378 AKT2P31751 481 aa6.96□□□□□ -1.3
HMGN1-205ENST00000419378 ARHGAP25P42331 645 aa6.96□□□□□ -1.3
HMGN1-205ENST00000419378 CSNK1DP48730 415 aa6.96□□□□□ -1.3
HMGN1-205ENST00000419378 SIM1P81133 766 aaPredicted RBP6.96□□□□□ -1.3
HMGN1-205ENST00000419378 SLC10A7Q0GE19 358 aa6.96□□□□□ -1.3
HMGN1-205ENST00000419378 OVGP1Q12889 678 aa6.96□□□□□ -1.3
HMGN1-205ENST00000419378 HNRNPDQ14103 355 aaKnown RBP6.96□□□□□ -1.3
HMGN1-205ENST00000419378 ZNF235Q14590 738 aa6.96□□□□□ -1.3
HMGN1-205ENST00000419378 MESDQ14696 234 aa6.96□□□□□ -1.3
HMGN1-205ENST00000419378 STAT4Q14765 748 aa6.96□□□□□ -1.3
HMGN1-205ENST00000419378 PDK2Q15119 407 aa6.96□□□□□ -1.3
HMGN1-205ENST00000419378 SHBQ15464 509 aa6.96□□□□□ -1.3
HMGN1-205ENST00000419378 ATP13A4Q4VNC1 1196 aa6.96□□□□□ -1.3
HMGN1-205ENST00000419378 STEAP3Q658P3 488 aa6.96□□□□□ -1.3
HMGN1-205ENST00000419378 NCBP2-AS2Q69YL0 99 aa6.96□□□□□ -1.3
HMGN1-205ENST00000419378 DBX2Q6ZNG2 339 aa6.96□□□□□ -1.3
HMGN1-205ENST00000419378 ABI3BPQ7Z7G0 1075 aa6.96□□□□□ -1.3
HMGN1-205ENST00000419378 SRLQ86TD4 932 aa6.96□□□□□ -1.3
HMGN1-205ENST00000419378 IQCHQ86VS3 1027 aa6.96□□□□□ -1.3
HMGN1-205ENST00000419378 ZSCAN30Q86W11 494 aa6.96□□□□□ -1.3
HMGN1-205ENST00000419378 ZSWIM9Q86XI8 627 aa6.96□□□□□ -1.3
HMGN1-205ENST00000419378 SPATS2Q86XZ4 545 aaKnown RBP6.96□□□□□ -1.3
HMGN1-205ENST00000419378 RHOT2Q8IXI1 618 aa6.96□□□□□ -1.3
HMGN1-205ENST00000419378 ATPAF2Q8N5M1 289 aa6.96□□□□□ -1.3
HMGN1-205ENST00000419378 KCTD6Q8NC69 237 aa6.96□□□□□ -1.3
HMGN1-205ENST00000419378 HCAR2Q8TDS4 363 aa6.96□□□□□ -1.3
HMGN1-205ENST00000419378 SETD7Q8WTS6 366 aaKnown RBP6.96□□□□□ -1.3
HMGN1-205ENST00000419378 USP7Q93009 1102 aa6.96□□□□□ -1.3
HMGN1-205ENST00000419378 FAF2Q96CS3 445 aa6.96□□□□□ -1.3
HMGN1-205ENST00000419378 KIRREL1Q96J84 757 aa6.96□□□□□ -1.3
HMGN1-205ENST00000419378 FEM1CQ96JP0 617 aa6.96□□□□□ -1.3
HMGN1-205ENST00000419378 ZNF599Q96NL3 588 aa6.96□□□□□ -1.3
HMGN1-205ENST00000419378 PSKH2Q96QS6 385 aa6.96□□□□□ -1.3
HMGN1-205ENST00000419378 TUBGCP5Q96RT8 1024 aa6.96□□□□□ -1.3
HMGN1-205ENST00000419378 ATP13A3Q9H7F0 1226 aa6.96□□□□□ -1.3
HMGN1-205ENST00000419378 ERVMER34-1Q9H9K5 563 aa6.96□□□□□ -1.3
HMGN1-205ENST00000419378 B4GALT6Q9UBX8 382 aa6.96□□□□□ -1.3
HMGN1-205ENST00000419378 INTUQ9ULD6 942 aa6.96□□□□□ -1.3
HMGN1-205ENST00000419378 BTBD3Q9Y2F9 522 aa6.96□□□□□ -1.3
HMGN1-205ENST00000419378 ZKSCAN5Q9Y2L8 839 aa6.96□□□□□ -1.3
HMGN1-205ENST00000419378 TRPM6Q9BX84 2022 aa6.96□□□□□ -1.3
HMGN1-205ENST00000419378 EPG5Q9HCE0 2579 aa6.95□□□□□ -1.3
HMGN1-205ENST00000419378 AKAP13Q12802 2813 aa6.95□□□□□ -1.3
HMGN1-205ENST00000419378 ZC3H12DA2A288 527 aaKnown RBP6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms