RNA–Protein interactions for RNA: ENST00000418628.5

PTCD3-204, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-204ENST00000418628 MTX2O75431 263 aa18.43■□□□□ 0.54
PTCD3-204ENST00000418628 ADRB1P08588 477 aa18.43■□□□□ 0.54
PTCD3-204ENST00000418628 MLNP12872 115 aa18.43■□□□□ 0.54
PTCD3-204ENST00000418628 CKMT2P17540 419 aa18.43■□□□□ 0.54
PTCD3-204ENST00000418628 FOXN2P32314 431 aa18.43■□□□□ 0.54
PTCD3-204ENST00000418628 CTBSQ01459 385 aa18.43■□□□□ 0.54
PTCD3-204ENST00000418628 DNAJC3Q13217 504 aa18.43■□□□□ 0.54
PTCD3-204ENST00000418628 LAMB3Q13751 1172 aa18.43■□□□□ 0.54
PTCD3-204ENST00000418628 DHX34Q14147 1143 aaKnown RBP18.43■□□□□ 0.54
PTCD3-204ENST00000418628 LDLRAP1Q5SW96 308 aa18.43■□□□□ 0.54
PTCD3-204ENST00000418628 N4BP2L1Q5TBK1 243 aaPredicted RBP18.43■□□□□ 0.54
PTCD3-204ENST00000418628 OGFOD3Q6PK18 319 aa18.43■□□□□ 0.54
PTCD3-204ENST00000418628 NLRP9Q7RTR0 991 aa18.43■□□□□ 0.54
PTCD3-204ENST00000418628 C11orf96Q7Z7L8 435 aa18.43■□□□□ 0.54
PTCD3-204ENST00000418628 C17orf82Q86X59 251 aaPredicted RBP18.43■□□□□ 0.54
PTCD3-204ENST00000418628 NXPE1Q8N323 547 aa18.43■□□□□ 0.54
PTCD3-204ENST00000418628 SPATA4Q8NEY3 305 aa18.43■□□□□ 0.54
PTCD3-204ENST00000418628 GPR156Q8NFN8 814 aa18.43■□□□□ 0.54
PTCD3-204ENST00000418628 GSDMCQ9BYG8 508 aa18.43■□□□□ 0.54
PTCD3-204ENST00000418628 SLC2A6Q9UGQ3 507 aa18.43■□□□□ 0.54
PTCD3-204ENST00000418628 MOSPD1Q9UJG1 213 aa18.43■□□□□ 0.54
PTCD3-204ENST00000418628 DNALI1O14645 258 aaPredicted RBP18.42■□□□□ 0.54
PTCD3-204ENST00000418628 TP73O15350 636 aa18.42■□□□□ 0.54
PTCD3-204ENST00000418628 NOBOXO60393 691 aa18.42■□□□□ 0.54
PTCD3-204ENST00000418628 ASMTLO95671 621 aa18.42■□□□□ 0.54
PTCD3-204ENST00000418628 ITGALP20701 1170 aa18.42■□□□□ 0.54
PTCD3-204ENST00000418628 AK4P27144 223 aaPredicted RBP18.42■□□□□ 0.54
PTCD3-204ENST00000418628 MC4RP32245 332 aa18.42■□□□□ 0.54
PTCD3-204ENST00000418628 NPY2RP49146 381 aa18.42■□□□□ 0.54
PTCD3-204ENST00000418628 CLCNKAP51800 687 aa18.42■□□□□ 0.54
PTCD3-204ENST00000418628 TMPRSS15P98073 1019 aa18.42■□□□□ 0.54
PTCD3-204ENST00000418628 B4GALNT1Q00973 533 aa18.42■□□□□ 0.54
PTCD3-204ENST00000418628 DR1Q01658 176 aa18.42■□□□□ 0.54
PTCD3-204ENST00000418628 ILF3Q12906 894 aaKnown RBP eCLIP18.42■□□□□ 0.543e-6■■■□□ 15.4
PTCD3-204ENST00000418628 PPP1R7Q15435 360 aa18.42■□□□□ 0.54
PTCD3-204ENST00000418628 SKIDA1Q1XH10 827 aa18.42■□□□□ 0.54
PTCD3-204ENST00000418628 GPR33Q49SQ1 333 aa18.42■□□□□ 0.54
PTCD3-204ENST00000418628 PCID2Q5JVF3 399 aa18.42■□□□□ 0.54
PTCD3-204ENST00000418628 MARK2Q7KZI7 788 aaKnown RBP18.42■□□□□ 0.54
PTCD3-204ENST00000418628 KLHL7Q8IXQ5 586 aa18.42■□□□□ 0.54
PTCD3-204ENST00000418628 PPIL6Q8IXY8 311 aa18.42■□□□□ 0.54
PTCD3-204ENST00000418628 ARL10Q8N8L6 244 aa18.42■□□□□ 0.54
PTCD3-204ENST00000418628 KYQ8NBH2 561 aa18.42■□□□□ 0.54
PTCD3-204ENST00000418628 CCDC97Q96F63 343 aaPredicted RBP18.42■□□□□ 0.54
PTCD3-204ENST00000418628 SERPINB12Q96P63 405 aa18.42■□□□□ 0.54
PTCD3-204ENST00000418628 KIFC1Q9BW19 673 aa18.42■□□□□ 0.54
PTCD3-204ENST00000418628 ASB8Q9H765 288 aa18.42■□□□□ 0.54
PTCD3-204ENST00000418628 SUDS3Q9H7L9 328 aaPredicted RBP18.42■□□□□ 0.54
PTCD3-204ENST00000418628 XAB2Q9HCS7 855 aaKnown RBP18.42■□□□□ 0.54
PTCD3-204ENST00000418628 SYBUQ9NX95 663 aa18.42■□□□□ 0.54
PTCD3-204ENST00000418628 NCKIPSDQ9NZQ3 722 aa18.42■□□□□ 0.54
PTCD3-204ENST00000418628 PLEKHM1Q9Y4G2 1056 aa18.42■□□□□ 0.54
PTCD3-204ENST00000418628 AKAP13Q12802 2813 aa18.41■□□□□ 0.54
PTCD3-204ENST00000418628 A6NCN8 305 aa18.41■□□□□ 0.54
PTCD3-204ENST00000418628 GRID2O43424 1007 aa18.41■□□□□ 0.54
PTCD3-204ENST00000418628 SGTAO43765 313 aa18.41■□□□□ 0.54
PTCD3-204ENST00000418628 TUBB4AP04350 444 aa18.41■□□□□ 0.54
PTCD3-204ENST00000418628 MGAT1P26572 445 aa18.41■□□□□ 0.54
PTCD3-204ENST00000418628 PMLP29590 882 aa18.41■□□□□ 0.54
PTCD3-204ENST00000418628 SESN2P58004 480 aaPredicted RBP18.41■□□□□ 0.54
PTCD3-204ENST00000418628 CRADDP78560 199 aa18.41■□□□□ 0.54
PTCD3-204ENST00000418628 TMEM115Q12893 351 aaPredicted RBP18.41■□□□□ 0.54
PTCD3-204ENST00000418628 ILKQ13418 452 aa18.41■□□□□ 0.54
PTCD3-204ENST00000418628 TCEA2Q15560 299 aa18.41■□□□□ 0.54
PTCD3-204ENST00000418628 RAB44Q7Z6P3 723 aaPredicted RBP18.41■□□□□ 0.54
PTCD3-204ENST00000418628 TAF8Q7Z7C8 310 aa18.41■□□□□ 0.54
PTCD3-204ENST00000418628 HOOK3Q86VS8 718 aa18.41■□□□□ 0.54
PTCD3-204ENST00000418628 PIANPQ8IYJ0 282 aa18.41■□□□□ 0.54
PTCD3-204ENST00000418628 AGGF1Q8N302 714 aaeCLIP18.41■□□□□ 0.54
PTCD3-204ENST00000418628 PPHLN1Q8NEY8 458 aaKnown RBP18.41■□□□□ 0.54
PTCD3-204ENST00000418628 ADAMTS14Q8WXS8 1223 aa18.41■□□□□ 0.54
PTCD3-204ENST00000418628 ULK4Q96C45 1275 aa18.41■□□□□ 0.54
PTCD3-204ENST00000418628 TRIM44Q96DX7 344 aaPredicted RBP18.41■□□□□ 0.54
PTCD3-204ENST00000418628 TIMM29Q9BSF4 260 aa18.41■□□□□ 0.54
PTCD3-204ENST00000418628 TRIM51Q9BSJ1 452 aa18.41■□□□□ 0.54
PTCD3-204ENST00000418628 ZCCHC2Q9C0B9 1178 aaKnown RBP18.41■□□□□ 0.54
PTCD3-204ENST00000418628 BFARQ9NZS9 450 aa18.41■□□□□ 0.54
PTCD3-204ENST00000418628 TAAR2Q9P1P5 351 aa18.41■□□□□ 0.54
PTCD3-204ENST00000418628 CDC23Q9UJX2 597 aa18.41■□□□□ 0.54
PTCD3-204ENST00000418628 SOX13Q9UN79 622 aa18.41■□□□□ 0.54
PTCD3-204ENST00000418628 MED19A0JLT2 244 aaPredicted RBP18.4■□□□□ 0.54
PTCD3-204ENST00000418628 CCDC162PA2VCL2 907 aa18.4■□□□□ 0.54
PTCD3-204ENST00000418628 EME2A4GXA9 379 aaPredicted RBP18.4■□□□□ 0.54
PTCD3-204ENST00000418628 KIF2AO00139 706 aaPredicted RBP18.4■□□□□ 0.54
PTCD3-204ENST00000418628 TTI1O43156 1089 aa18.4■□□□□ 0.54
PTCD3-204ENST00000418628 CDK14O94921 469 aa18.4■□□□□ 0.54
PTCD3-204ENST00000418628 GP1BAP07359 652 aa18.4■□□□□ 0.54
PTCD3-204ENST00000418628 PRSS56P0CW18 603 aa18.4■□□□□ 0.54
PTCD3-204ENST00000418628 ACRV1P26436 265 aa18.4■□□□□ 0.54
PTCD3-204ENST00000418628 ARNTP27540 789 aa18.4■□□□□ 0.54
PTCD3-204ENST00000418628 CDKN1CP49918 316 aaPredicted RBP18.4■□□□□ 0.54
PTCD3-204ENST00000418628 CTSCP53634 463 aa18.4■□□□□ 0.54
PTCD3-204ENST00000418628 CACNG1Q06432 222 aa18.4■□□□□ 0.54
PTCD3-204ENST00000418628 XKR5Q6UX68 686 aa18.4■□□□□ 0.54
PTCD3-204ENST00000418628 LRRTM4Q86VH4 590 aa18.4■□□□□ 0.54
PTCD3-204ENST00000418628 SFTPA2Q8IWL1 248 aa18.4■□□□□ 0.54
PTCD3-204ENST00000418628 RASGEF1AQ8N9B8 481 aa18.4■□□□□ 0.54
PTCD3-204ENST00000418628 CHRAC1Q9NRG0 131 aa18.4■□□□□ 0.54
PTCD3-204ENST00000418628 SPATS2LQ9NUQ6 558 aaKnown RBP18.4■□□□□ 0.54
PTCD3-204ENST00000418628 ASIC3Q9UHC3 531 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms