RNA–Protein interactions for RNA: ENST00000418132.7

CASC3-203, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 1 (best)

Gene CASC3, Length 1,986 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-203ENST00000418132 KPNA2P52292 529 aaKnown RBP20.59■□□□□ 0.89
CASC3-203ENST00000418132 RPS14P62263 151 aaKnown RBP20.59■□□□□ 0.89
CASC3-203ENST00000418132 PDAP1Q13442 181 aaKnown RBP20.59■□□□□ 0.89
CASC3-203ENST00000418132 CSHL1Q14406 222 aa20.59■□□□□ 0.89
CASC3-203ENST00000418132 FBXO43Q4G163 708 aa20.59■□□□□ 0.89
CASC3-203ENST00000418132 AGAP9Q5VTM2 703 aa20.59■□□□□ 0.89
CASC3-203ENST00000418132 LRRC8EQ6NSJ5 796 aa20.59■□□□□ 0.89
CASC3-203ENST00000418132 SPNS2Q8IVW8 549 aa20.59■□□□□ 0.89
CASC3-203ENST00000418132 TRIM42Q8IWZ5 723 aa20.59■□□□□ 0.89
CASC3-203ENST00000418132 SPATA6LQ8N4H0 392 aa20.59■□□□□ 0.89
CASC3-203ENST00000418132 FAM3CQ92520 227 aa20.59■□□□□ 0.89
CASC3-203ENST00000418132 DTD2Q96FN9 168 aa20.59■□□□□ 0.89
CASC3-203ENST00000418132 ZSCAN5AQ9BUG6 496 aa20.59■□□□□ 0.89
CASC3-203ENST00000418132 ABCG8Q9H221 673 aa20.59■□□□□ 0.89
CASC3-203ENST00000418132 CD248Q9HCU0 757 aa20.59■□□□□ 0.89
CASC3-203ENST00000418132 TARM1B6A8C7 271 aa20.59■□□□□ 0.89
CASC3-203ENST00000418132 SBK3P0C264 359 aa20.59■□□□□ 0.89
CASC3-203ENST00000418132 HOXB2P14652 356 aa20.59■□□□□ 0.89
CASC3-203ENST00000418132 CPA3P15088 417 aa20.59■□□□□ 0.89
CASC3-203ENST00000418132 BGNP21810 368 aa20.59■□□□□ 0.89
CASC3-203ENST00000418132 GLRBP48167 497 aa20.59■□□□□ 0.89
CASC3-203ENST00000418132 CCINQ13939 588 aa20.59■□□□□ 0.89
CASC3-203ENST00000418132 RAB3IL1Q8TBN0 382 aa20.59■□□□□ 0.89
CASC3-203ENST00000418132 RDH11Q8TC12 318 aa20.59■□□□□ 0.89
CASC3-203ENST00000418132 COPS8Q99627 209 aa20.59■□□□□ 0.89
CASC3-203ENST00000418132 GPR21Q99679 349 aa20.59■□□□□ 0.89
CASC3-203ENST00000418132 ELAC2Q9BQ52 826 aaKnown RBP20.59■□□□□ 0.89
CASC3-203ENST00000418132 RIOK2Q9BVS4 552 aaKnown RBP20.59■□□□□ 0.89
CASC3-203ENST00000418132 SYTL2Q9HCH5 934 aa20.59■□□□□ 0.89
CASC3-203ENST00000418132 GNPTGQ9UJJ9 305 aa20.59■□□□□ 0.89
CASC3-203ENST00000418132 MID2Q9UJV3 735 aa20.59■□□□□ 0.89
CASC3-203ENST00000418132 G3V2L1 256 aa20.58■□□□□ 0.89
CASC3-203ENST00000418132 NEMP1O14524 444 aa20.58■□□□□ 0.89
CASC3-203ENST00000418132 AP1G1O43747 822 aa20.58■□□□□ 0.89
CASC3-203ENST00000418132 NEFHP12036 1026 aa20.58■□□□□ 0.89
CASC3-203ENST00000418132 ALDH3A1P30838 453 aa20.58■□□□□ 0.89
CASC3-203ENST00000418132 SKIV2L2P42285 1042 aaKnown RBP20.58■□□□□ 0.89
CASC3-203ENST00000418132 NSG1P42857 185 aa20.58■□□□□ 0.89
CASC3-203ENST00000418132 ZNF284Q2VY69 593 aa20.58■□□□□ 0.89
CASC3-203ENST00000418132 AGBL4Q5VU57 503 aa20.58■□□□□ 0.89
CASC3-203ENST00000418132 FAM136AQ96C01 138 aa20.58■□□□□ 0.89
CASC3-203ENST00000418132 MKRN2Q9H000 416 aaKnown RBP20.58■□□□□ 0.89
CASC3-203ENST00000418132 FGFR1OP2Q9NVK5 253 aa20.58■□□□□ 0.89
CASC3-203ENST00000418132 H3BMM5 538 aa20.57■□□□□ 0.88
CASC3-203ENST00000418132 TK2O00142 265 aa20.57■□□□□ 0.88
CASC3-203ENST00000418132 C7P10643 843 aa20.57■□□□□ 0.88
CASC3-203ENST00000418132 C6P13671 934 aa20.57■□□□□ 0.88
CASC3-203ENST00000418132 COL9A1P20849 921 aa20.57■□□□□ 0.88
CASC3-203ENST00000418132 SF3A3Q12874 501 aaKnown RBP eCLIP20.57■□□□□ 0.88
CASC3-203ENST00000418132 ACAP2Q15057 778 aa20.57■□□□□ 0.88
CASC3-203ENST00000418132 PAQR3Q6TCH7 311 aa20.57■□□□□ 0.88
CASC3-203ENST00000418132 MACC1Q6ZN28 852 aa20.57■□□□□ 0.88
CASC3-203ENST00000418132 ZNF765Q7L2R6 523 aa20.57■□□□□ 0.88
CASC3-203ENST00000418132 CACUL1Q86Y37 369 aa20.57■□□□□ 0.88
CASC3-203ENST00000418132 C10orf67Q8IYJ2 551 aa20.57■□□□□ 0.88
CASC3-203ENST00000418132 CLDN19Q8N6F1 224 aa20.57■□□□□ 0.88
CASC3-203ENST00000418132 AP2M1Q96CW1 435 aa20.57■□□□□ 0.88
CASC3-203ENST00000418132 SCYL1Q96KG9 808 aa20.57■□□□□ 0.88
CASC3-203ENST00000418132 MRPL57Q9BQC6 102 aaKnown RBP20.57■□□□□ 0.88
CASC3-203ENST00000418132 NSRP1Q9H0G5 558 aaKnown RBP20.57■□□□□ 0.88
CASC3-203ENST00000418132 MRPL46Q9H2W6 279 aaKnown RBP20.57■□□□□ 0.88
CASC3-203ENST00000418132 CPSF2Q9P2I0 782 aaKnown RBP20.57■□□□□ 0.88
CASC3-203ENST00000418132 GALPQ9UBC7 116 aa20.57■□□□□ 0.88
CASC3-203ENST00000418132 XPR1Q9UBH6 696 aa20.57■□□□□ 0.88
CASC3-203ENST00000418132 PRSS21Q9Y6M0 314 aa20.57■□□□□ 0.88
CASC3-203ENST00000418132 E5RI56 91 aa20.57■□□□□ 0.88
CASC3-203ENST00000418132 MMP20O60882 483 aa20.57■□□□□ 0.88
CASC3-203ENST00000418132 RECQL5O94762 991 aaPredicted RBP20.57■□□□□ 0.88
CASC3-203ENST00000418132 CHRM3P20309 590 aa20.57■□□□□ 0.88
CASC3-203ENST00000418132 KCNA4P22459 653 aa20.57■□□□□ 0.88
CASC3-203ENST00000418132 CLCN7P51798 805 aa20.57■□□□□ 0.88
CASC3-203ENST00000418132 TAS2R38P59533 333 aa20.57■□□□□ 0.88
CASC3-203ENST00000418132 B4GALNT1Q00973 533 aa20.57■□□□□ 0.88
CASC3-203ENST00000418132 TFF2Q03403 129 aa20.57■□□□□ 0.88
CASC3-203ENST00000418132 CCDC15Q0P6D6 951 aa20.57■□□□□ 0.88
CASC3-203ENST00000418132 HSF5Q4G112 596 aaPredicted RBP20.57■□□□□ 0.88
CASC3-203ENST00000418132 TECRLQ5HYJ1 363 aa20.57■□□□□ 0.88
CASC3-203ENST00000418132 GPRC6AQ5T6X5 926 aa20.57■□□□□ 0.88
CASC3-203ENST00000418132 PTRHD1Q6GMV3 140 aaKnown RBP20.57■□□□□ 0.88
CASC3-203ENST00000418132 KLC3Q6P597 504 aa20.57■□□□□ 0.88
CASC3-203ENST00000418132 HDDC3Q8N4P3 179 aa20.57■□□□□ 0.88
CASC3-203ENST00000418132 CCDC197Q8NCU1 140 aa20.57■□□□□ 0.88
CASC3-203ENST00000418132 CD200R1Q8TD46 325 aa20.57■□□□□ 0.88
CASC3-203ENST00000418132 FAM131CQ96AQ9 280 aa20.57■□□□□ 0.88
CASC3-203ENST00000418132 VPS35Q96QK1 796 aa20.57■□□□□ 0.88
CASC3-203ENST00000418132 SLC30A3Q99726 388 aa20.57■□□□□ 0.88
CASC3-203ENST00000418132 SLCO1B3Q9NPD5 702 aa20.57■□□□□ 0.88
CASC3-203ENST00000418132 SERGEFQ9UGK8 458 aa20.57■□□□□ 0.88
CASC3-203ENST00000418132 DUSP12Q9UNI6 340 aa20.57■□□□□ 0.88
CASC3-203ENST00000418132 COQ6Q9Y2Z9 468 aa20.57■□□□□ 0.88
CASC3-203ENST00000418132 FADS2P1A8MWK0 482 aa20.56■□□□□ 0.88
CASC3-203ENST00000418132 EDF1O60869 148 aaKnown RBP20.56■□□□□ 0.88
CASC3-203ENST00000418132 CHI3L2Q15782 390 aa20.56■□□□□ 0.88
CASC3-203ENST00000418132 UGT3A1Q6NUS8 523 aa20.56■□□□□ 0.88
CASC3-203ENST00000418132 FAM47EQ6ZV65 393 aa20.56■□□□□ 0.88
CASC3-203ENST00000418132 C10orf107Q8IVU9 208 aa20.56■□□□□ 0.88
CASC3-203ENST00000418132 GIMAP7Q8NHV1 300 aa20.56■□□□□ 0.88
CASC3-203ENST00000418132 CXorf40AQ8TE69 158 aa20.56■□□□□ 0.88
CASC3-203ENST00000418132 PITPNM3Q9BZ71 974 aa20.56■□□□□ 0.88
CASC3-203ENST00000418132 UNKQ9C0B0 810 aaKnown RBP20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms