RNA–Protein interactions for RNA: ENST00000417997.1

HMGB3P20-201, Transcript of high mobility group box 3 pseudogene 20, humanhuman

BASIC

Gene HMGB3P20, Length 600 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P20-201ENST00000417997 TACR3P29371 465 aa3.93□□□□□ -1.78
HMGB3P20-201ENST00000417997 HOXA11P31270 313 aaPredicted RBP3.93□□□□□ -1.78
HMGB3P20-201ENST00000417997 CD52P31358 61 aa3.93□□□□□ -1.78
HMGB3P20-201ENST00000417997 MLH1P40692 756 aa3.93□□□□□ -1.78
HMGB3P20-201ENST00000417997 TAF6P49848 677 aa3.93□□□□□ -1.78
HMGB3P20-201ENST00000417997 GPC5P78333 572 aa3.93□□□□□ -1.78
HMGB3P20-201ENST00000417997 BFSP2Q13515 415 aa3.93□□□□□ -1.78
HMGB3P20-201ENST00000417997 MESDQ14696 234 aa3.93□□□□□ -1.78
HMGB3P20-201ENST00000417997 KPNB1Q14974 876 aaKnown RBP3.93□□□□□ -1.78
HMGB3P20-201ENST00000417997 RPS6KA1Q15418 735 aa3.93□□□□□ -1.78
HMGB3P20-201ENST00000417997 ELF2Q15723 593 aa3.93□□□□□ -1.78
HMGB3P20-201ENST00000417997 TRIM71Q2Q1W2 868 aaKnown RBP3.93□□□□□ -1.78
HMGB3P20-201ENST00000417997 ODF2Q5BJF6 829 aa3.93□□□□□ -1.78
HMGB3P20-201ENST00000417997 FBXO47Q5MNV8 452 aa3.93□□□□□ -1.78
HMGB3P20-201ENST00000417997 SEL1L2Q5TEA6 688 aa3.93□□□□□ -1.78
HMGB3P20-201ENST00000417997 MANEALQ5VSG8 457 aa3.93□□□□□ -1.78
HMGB3P20-201ENST00000417997 CCSAPQ6IQ19 270 aaPredicted RBP3.93□□□□□ -1.78
HMGB3P20-201ENST00000417997 ACAD10Q6JQN1 1059 aa3.93□□□□□ -1.78
HMGB3P20-201ENST00000417997 C11orf63Q6NUN7 778 aa3.93□□□□□ -1.78
HMGB3P20-201ENST00000417997 DNAJC24Q6P3W2 148 aa3.93□□□□□ -1.78
HMGB3P20-201ENST00000417997 RNF44Q7L0R7 432 aa3.93□□□□□ -1.78
HMGB3P20-201ENST00000417997 LRRC8DQ7L1W4 858 aa3.93□□□□□ -1.78
HMGB3P20-201ENST00000417997 RPAINQ86UA6 219 aa3.93□□□□□ -1.78
HMGB3P20-201ENST00000417997 DNAAF5Q86Y56 855 aa3.93□□□□□ -1.78
HMGB3P20-201ENST00000417997 PALB2Q86YC2 1186 aa3.93□□□□□ -1.78
HMGB3P20-201ENST00000417997 ANKRD13BQ86YJ7 626 aa3.93□□□□□ -1.78
HMGB3P20-201ENST00000417997 WDR75Q8IWA0 830 aaKnown RBP3.93□□□□□ -1.78
HMGB3P20-201ENST00000417997 SDR16C5Q8N3Y7 309 aa3.93□□□□□ -1.78
HMGB3P20-201ENST00000417997 LRRC52Q8N7C0 313 aa3.93□□□□□ -1.78
HMGB3P20-201ENST00000417997 UBL4BQ8N7F7 174 aa3.93□□□□□ -1.78
HMGB3P20-201ENST00000417997 TMEM35BQ8NCS4 154 aa3.93□□□□□ -1.78
HMGB3P20-201ENST00000417997 C1orf131Q8NDD1 294 aaKnown RBP3.93□□□□□ -1.78
HMGB3P20-201ENST00000417997 GADD45GIP1Q8TAE8 222 aaPredicted RBP3.93□□□□□ -1.78
HMGB3P20-201ENST00000417997 URGCPQ8TCY9 931 aa3.93□□□□□ -1.78
HMGB3P20-201ENST00000417997 COQ8BQ96D53 544 aa3.93□□□□□ -1.78
HMGB3P20-201ENST00000417997 ARHGEF26Q96DR7 871 aa3.93□□□□□ -1.78
HMGB3P20-201ENST00000417997 HIC2Q96JB3 615 aa3.93□□□□□ -1.78
HMGB3P20-201ENST00000417997 RPGRIP1Q96KN7 1286 aa3.93□□□□□ -1.78
HMGB3P20-201ENST00000417997 DEFB118Q96PH6 123 aa3.93□□□□□ -1.78
HMGB3P20-201ENST00000417997 PCDHB18PQ96TA0 734 aa3.93□□□□□ -1.78
HMGB3P20-201ENST00000417997 PSMB7Q99436 277 aa3.93□□□□□ -1.78
HMGB3P20-201ENST00000417997 C11orf70Q9BRQ4 267 aa3.93□□□□□ -1.78
HMGB3P20-201ENST00000417997 SYT11Q9BT88 431 aa3.93□□□□□ -1.78
HMGB3P20-201ENST00000417997 NUP85Q9BW27 656 aa3.93□□□□□ -1.78
HMGB3P20-201ENST00000417997 CINPQ9BW66 212 aaPredicted RBP3.93□□□□□ -1.78
HMGB3P20-201ENST00000417997 ADGRE3Q9BY15 652 aa3.93□□□□□ -1.78
HMGB3P20-201ENST00000417997 SEZ6LQ9BYH1 1024 aa3.93□□□□□ -1.78
HMGB3P20-201ENST00000417997 ISCUQ9H1K1 167 aa3.93□□□□□ -1.78
HMGB3P20-201ENST00000417997 SNX25Q9H3E2 840 aa3.93□□□□□ -1.78
HMGB3P20-201ENST00000417997 MRPL47Q9HD33 250 aaKnown RBP3.93□□□□□ -1.78
HMGB3P20-201ENST00000417997 ERVK-5Q9HDB9 667 aa3.93□□□□□ -1.78
HMGB3P20-201ENST00000417997 ACP6Q9NPH0 428 aa3.93□□□□□ -1.78
HMGB3P20-201ENST00000417997 CHST12Q9NRB3 414 aa3.93□□□□□ -1.78
HMGB3P20-201ENST00000417997 ARGLU1Q9NWB6 273 aaPredicted RBP3.93□□□□□ -1.78
HMGB3P20-201ENST00000417997 TAS2R14Q9NYV8 317 aa3.93□□□□□ -1.78
HMGB3P20-201ENST00000417997 UVRAGQ9P2Y5 699 aa3.93□□□□□ -1.78
HMGB3P20-201ENST00000417997 SIX4Q9UIU6 781 aa3.93□□□□□ -1.78
HMGB3P20-201ENST00000417997 ANAPC7Q9UJX3 599 aa3.93□□□□□ -1.78
HMGB3P20-201ENST00000417997 GTF3C4Q9UKN8 822 aa3.93□□□□□ -1.78
HMGB3P20-201ENST00000417997 NENFQ9UMX5 172 aa3.93□□□□□ -1.78
HMGB3P20-201ENST00000417997 CORO2BQ9UQ03 480 aa3.93□□□□□ -1.78
HMGB3P20-201ENST00000417997 SCN5AQ14524 2016 aa3.93□□□□□ -1.78
HMGB3P20-201ENST00000417997 MICAL3Q7RTP6 2002 aa3.93□□□□□ -1.78
HMGB3P20-201ENST00000417997 GOLGA6L10A0A0M3HER8 536 aa3.92□□□□□ -1.78
HMGB3P20-201ENST00000417997 SMIM28A0A1B0GU29 152 aa3.92□□□□□ -1.78
HMGB3P20-201ENST00000417997 ARHGEF37A1IGU5 675 aa3.92□□□□□ -1.78
HMGB3P20-201ENST00000417997 CASTOR2A6NHX0 329 aa3.92□□□□□ -1.78
HMGB3P20-201ENST00000417997 A8MXQ7 604 aa3.92□□□□□ -1.78
HMGB3P20-201ENST00000417997 MIF4GDA9UHW6 222 aaKnown RBP3.92□□□□□ -1.78
HMGB3P20-201ENST00000417997 TRIM38O00635 465 aa3.92□□□□□ -1.78
HMGB3P20-201ENST00000417997 CEP104O60308 925 aa3.92□□□□□ -1.78
HMGB3P20-201ENST00000417997 PRAMEF2O60811 474 aa3.92□□□□□ -1.78
HMGB3P20-201ENST00000417997 PQBP1O60828 265 aaKnown RBP3.92□□□□□ -1.78
HMGB3P20-201ENST00000417997 HUS1O60921 280 aa3.92□□□□□ -1.78
HMGB3P20-201ENST00000417997 NTN1O95631 604 aa3.92□□□□□ -1.78
HMGB3P20-201ENST00000417997 CALCAP01258 141 aa3.92□□□□□ -1.78
HMGB3P20-201ENST00000417997 VDRP11473 427 aa3.92□□□□□ -1.78
HMGB3P20-201ENST00000417997 UNGP13051 313 aaPredicted RBP3.92□□□□□ -1.78
HMGB3P20-201ENST00000417997 CCL5P13501 91 aa3.92□□□□□ -1.78
HMGB3P20-201ENST00000417997 KCNE1P15382 129 aa3.92□□□□□ -1.78
HMGB3P20-201ENST00000417997 CYP3A5P20815 502 aa3.92□□□□□ -1.78
HMGB3P20-201ENST00000417997 GJC1P36383 396 aa3.92□□□□□ -1.78
HMGB3P20-201ENST00000417997 SSR1P43307 286 aaKnown RBP3.92□□□□□ -1.78
HMGB3P20-201ENST00000417997 CPA2P48052 419 aa3.92□□□□□ -1.78
HMGB3P20-201ENST00000417997 ZNF132P52740 706 aa3.92□□□□□ -1.78
HMGB3P20-201ENST00000417997 NDST1P52848 882 aa3.92□□□□□ -1.78
HMGB3P20-201ENST00000417997 RAD23BP54727 409 aa3.92□□□□□ -1.78
HMGB3P20-201ENST00000417997 HADHBP55084 474 aaKnown RBP3.92□□□□□ -1.78
HMGB3P20-201ENST00000417997 CDH8P55286 799 aa3.92□□□□□ -1.78
HMGB3P20-201ENST00000417997 SLC8A3P57103 927 aa3.92□□□□□ -1.78
HMGB3P20-201ENST00000417997 TUBB4BP68371 445 aa3.92□□□□□ -1.78
HMGB3P20-201ENST00000417997 C2orf54Q08AI8 447 aa3.92□□□□□ -1.78
HMGB3P20-201ENST00000417997 CCDC15Q0P6D6 951 aa3.92□□□□□ -1.78
HMGB3P20-201ENST00000417997 INCA1Q0VD86 236 aa3.92□□□□□ -1.78
HMGB3P20-201ENST00000417997 GRIK3Q13003 919 aa3.92□□□□□ -1.78
HMGB3P20-201ENST00000417997 LPIN1Q14693 890 aa3.92□□□□□ -1.78
HMGB3P20-201ENST00000417997 GOLGA7BQ2TAP0 167 aa3.92□□□□□ -1.78
HMGB3P20-201ENST00000417997 CFAP221Q4G0U5 840 aa3.92□□□□□ -1.78
HMGB3P20-201ENST00000417997 C10orf25Q5T742 122 aa3.92□□□□□ -1.78
HMGB3P20-201ENST00000417997 C9orf57Q5W0N0 161 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 349.4 ms