RNA–Protein interactions for RNA: ENST00000417664.6

SSBP3-205, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-205ENST00000417664 GRID2O43424 1007 aa16.62■□□□□ 0.25
SSBP3-205ENST00000417664 SUPT7LO94864 414 aa16.62■□□□□ 0.25
SSBP3-205ENST00000417664 C1SP09871 688 aa16.62■□□□□ 0.25
SSBP3-205ENST00000417664 GFAPP14136 432 aa16.62■□□□□ 0.25
SSBP3-205ENST00000417664 UGT1A6P19224 532 aa16.62■□□□□ 0.25
SSBP3-205ENST00000417664 UGT1A1P22309 533 aa16.62■□□□□ 0.25
SSBP3-205ENST00000417664 UGT1A4P22310 534 aa16.62■□□□□ 0.25
SSBP3-205ENST00000417664 XPAP23025 273 aaPredicted RBP16.62■□□□□ 0.25
SSBP3-205ENST00000417664 ADSLP30566 484 aaPredicted RBP16.62■□□□□ 0.25
SSBP3-205ENST00000417664 UGT1A3P35503 534 aa16.62■□□□□ 0.25
SSBP3-205ENST00000417664 UGT1A5P35504 534 aa16.62■□□□□ 0.25
SSBP3-205ENST00000417664 EIF2DP41214 584 aaKnown RBP16.62■□□□□ 0.25
SSBP3-205ENST00000417664 HYAL1Q12794 435 aa16.62■□□□□ 0.25
SSBP3-205ENST00000417664 ATAT1Q5SQI0 421 aa16.62■□□□□ 0.25
SSBP3-205ENST00000417664 SH2D4BQ5SQS7 431 aa16.62■□□□□ 0.25
SSBP3-205ENST00000417664 SUGP1Q8IWZ8 645 aaKnown RBP16.62■□□□□ 0.25
SSBP3-205ENST00000417664 FBXO39Q8N4B4 442 aa16.62■□□□□ 0.25
SSBP3-205ENST00000417664 PTGR2Q8N8N7 351 aaPredicted RBP16.62■□□□□ 0.25
SSBP3-205ENST00000417664 GIMAP7Q8NHV1 300 aa16.62■□□□□ 0.25
SSBP3-205ENST00000417664 EEF1AKMT1Q8WVE0 214 aa16.62■□□□□ 0.25
SSBP3-205ENST00000417664 UCMAQ8WVF2 138 aa16.62■□□□□ 0.25
SSBP3-205ENST00000417664 LINGO1Q96FE5 620 aa16.62■□□□□ 0.25
SSBP3-205ENST00000417664 PANX3Q96QZ0 392 aa16.62■□□□□ 0.25
SSBP3-205ENST00000417664 COPS8Q99627 209 aa16.62■□□□□ 0.25
SSBP3-205ENST00000417664 SLC30A3Q99726 388 aa16.62■□□□□ 0.25
SSBP3-205ENST00000417664 BTBD10Q9BSF8 475 aa16.62■□□□□ 0.25
SSBP3-205ENST00000417664 C1QTNF3Q9BXJ4 246 aa16.62■□□□□ 0.25
SSBP3-205ENST00000417664 ARMCX1Q9P291 453 aa16.62■□□□□ 0.25
SSBP3-205ENST00000417664 GALPQ9UBC7 116 aa16.62■□□□□ 0.25
SSBP3-205ENST00000417664 CDYLQ9Y232 598 aa16.62■□□□□ 0.25
SSBP3-205ENST00000417664 MTF2Q9Y483 593 aaPredicted RBP16.62■□□□□ 0.25
SSBP3-205ENST00000417664 KIF26AQ9ULI4 1882 aaPredicted RBP16.62■□□□□ 0.25
SSBP3-205ENST00000417664 EDDM13A0A1B0GTR0 161 aa16.62■□□□□ 0.25
SSBP3-205ENST00000417664 A8MX80 341 aa16.62■□□□□ 0.25
SSBP3-205ENST00000417664 UBXN8O00124 270 aa16.62■□□□□ 0.25
SSBP3-205ENST00000417664 GPR39O43194 453 aa16.62■□□□□ 0.25
SSBP3-205ENST00000417664 TIMP2P16035 220 aa16.62■□□□□ 0.25
SSBP3-205ENST00000417664 DGKAP23743 735 aa16.62■□□□□ 0.25
SSBP3-205ENST00000417664 KCNJ2P63252 427 aa16.62■□□□□ 0.25
SSBP3-205ENST00000417664 TSNQ15631 228 aaKnown RBP16.62■□□□□ 0.25
SSBP3-205ENST00000417664 HNRNPA1L2Q32P51 320 aaKnown RBP16.62■□□□□ 0.25
SSBP3-205ENST00000417664 TTLL9Q3SXZ7 439 aa16.62■□□□□ 0.25
SSBP3-205ENST00000417664 SLC9B1Q4ZJI4 515 aa16.62■□□□□ 0.25
SSBP3-205ENST00000417664 UNC50Q53HI1 259 aa16.62■□□□□ 0.25
SSBP3-205ENST00000417664 TANGO2Q6ICL3 276 aa16.62■□□□□ 0.25
SSBP3-205ENST00000417664 DPPA4Q7L190 304 aa16.62■□□□□ 0.25
SSBP3-205ENST00000417664 ADAMTSL2Q86TH1 951 aa16.62■□□□□ 0.25
SSBP3-205ENST00000417664 CUZD1Q86UP6 607 aa16.62■□□□□ 0.25
SSBP3-205ENST00000417664 TERB1Q8NA31 727 aa16.62■□□□□ 0.25
SSBP3-205ENST00000417664 TMIEQ8NEW7 156 aa16.62■□□□□ 0.25
SSBP3-205ENST00000417664 MAPK15Q8TD08 544 aa16.62■□□□□ 0.25
SSBP3-205ENST00000417664 PRR11Q96HE9 360 aaPredicted RBP16.62■□□□□ 0.25
SSBP3-205ENST00000417664 MAELQ96JY0 434 aaKnown RBP16.62■□□□□ 0.25
SSBP3-205ENST00000417664 ZFYVE19Q96K21 471 aa16.62■□□□□ 0.25
SSBP3-205ENST00000417664 HPS4Q9NQG7 708 aa16.62■□□□□ 0.25
SSBP3-205ENST00000417664 SPATS2LQ9NUQ6 558 aaKnown RBP16.62■□□□□ 0.25
SSBP3-205ENST00000417664 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.62■□□□□ 0.25
SSBP3-205ENST00000417664 GOLGA8QA0A0J9YX86 632 aa16.61■□□□□ 0.25
SSBP3-205ENST00000417664 GOLGA8OA6NCC3 632 aa16.61■□□□□ 0.25
SSBP3-205ENST00000417664 C16orf96A6NNT2 1141 aa16.61■□□□□ 0.25
SSBP3-205ENST00000417664 SUPT3HB4E1H0 165 aa16.61■□□□□ 0.25
SSBP3-205ENST00000417664 PRRT4C9JH25 899 aa16.61■□□□□ 0.25
SSBP3-205ENST00000417664 GOLGA8NF8WBI6 632 aa16.61■□□□□ 0.25
SSBP3-205ENST00000417664 PSMD11O00231 422 aa16.61■□□□□ 0.25
SSBP3-205ENST00000417664 EIF3FO00303 357 aaPredicted RBP16.61■□□□□ 0.25
SSBP3-205ENST00000417664 MAGEC1O60732 1142 aa16.61■□□□□ 0.25
SSBP3-205ENST00000417664 SUPT3HO75486 399 aa16.61■□□□□ 0.25
SSBP3-205ENST00000417664 CTSLP07711 333 aa16.61■□□□□ 0.25
SSBP3-205ENST00000417664 FGF4P08620 206 aa16.61■□□□□ 0.25
SSBP3-205ENST00000417664 CBSLP0DN79 551 aa16.61■□□□□ 0.25
SSBP3-205ENST00000417664 BMP1P13497 986 aa16.61■□□□□ 0.25
SSBP3-205ENST00000417664 CBSP35520 551 aa16.61■□□□□ 0.25
SSBP3-205ENST00000417664 CCR10P46092 362 aa16.61■□□□□ 0.25
SSBP3-205ENST00000417664 ELF3P78545 371 aaPredicted RBP16.61■□□□□ 0.25
SSBP3-205ENST00000417664 RUNX3Q13761 415 aa16.61■□□□□ 0.25
SSBP3-205ENST00000417664 PFKFB4Q16877 469 aa16.61■□□□□ 0.25
SSBP3-205ENST00000417664 VWA5B1Q5TIE3 1220 aa16.61■□□□□ 0.25
SSBP3-205ENST00000417664 CES5AQ6NT32 575 aa16.61■□□□□ 0.25
SSBP3-205ENST00000417664 ERAP2Q6P179 960 aa16.61■□□□□ 0.25
SSBP3-205ENST00000417664 CYB5D1Q6P9G0 228 aa16.61■□□□□ 0.25
SSBP3-205ENST00000417664 VITQ6UXI7 678 aa16.61■□□□□ 0.25
SSBP3-205ENST00000417664 GPSM1Q86YR5 675 aa16.61■□□□□ 0.25
SSBP3-205ENST00000417664 YAF2Q8IY57 180 aa16.61■□□□□ 0.25
SSBP3-205ENST00000417664 CPNE9Q8IYJ1 553 aa16.61■□□□□ 0.25
SSBP3-205ENST00000417664 KIF2BQ8N4N8 673 aa16.61■□□□□ 0.25
SSBP3-205ENST00000417664 AGR3Q8TD06 166 aa16.61■□□□□ 0.25
SSBP3-205ENST00000417664 MYLIPQ8WY64 445 aa16.61■□□□□ 0.25
SSBP3-205ENST00000417664 MOCOSQ96EN8 888 aa16.61■□□□□ 0.25
SSBP3-205ENST00000417664 TBC1D10AQ9BXI6 508 aa16.61■□□□□ 0.25
SSBP3-205ENST00000417664 SARS2Q9NP81 518 aaKnown RBP16.61■□□□□ 0.25
SSBP3-205ENST00000417664 PCDH12Q9NPG4 1184 aa16.61■□□□□ 0.25
SSBP3-205ENST00000417664 GTSE1Q9NYZ3 720 aa16.61■□□□□ 0.25
SSBP3-205ENST00000417664 TRANK1O15050 2925 aa16.6■□□□□ 0.25
SSBP3-205ENST00000417664 SPECC1L-ADORA2AF8WAN1 911 aa16.6■□□□□ 0.25
SSBP3-205ENST00000417664 CDC7O00311 574 aa16.6■□□□□ 0.25
SSBP3-205ENST00000417664 MGRN1O60291 552 aa16.6■□□□□ 0.25
SSBP3-205ENST00000417664 ECI2O75521 394 aa16.6■□□□□ 0.25
SSBP3-205ENST00000417664 SLC25A14O95258 325 aaPredicted RBP16.6■□□□□ 0.25
SSBP3-205ENST00000417664 HNRNPLP14866 589 aaKnown RBP eCLIP16.6■□□□□ 0.253e-24■■■■■ 36.5
SSBP3-205ENST00000417664 PRDX6P30041 224 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms