RNA–Protein interactions for RNA: ENST00000417285.6

VEGFA-208, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,081 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-208ENST00000417285 OR2AG1Q9H205 316 aa25.04■■□□□ 1.6
VEGFA-208ENST00000417285 EPB41L1Q9H4G0 881 aa25.04■■□□□ 1.6
VEGFA-208ENST00000417285 FAM153AQ9UHL3 310 aa25.04■■□□□ 1.6
VEGFA-208ENST00000417285 KCNK6Q9Y257 313 aa25.04■■□□□ 1.6
VEGFA-208ENST00000417285 PCYT1BQ9Y5K3 369 aaPredicted RBP25.04■■□□□ 1.6
VEGFA-208ENST00000417285 EPN1Q9Y6I3 576 aaPredicted RBP25.04■■□□□ 1.6
VEGFA-208ENST00000417285 hCG_1818297A0A087WSY0 165 aa25.03■■□□□ 1.6
VEGFA-208ENST00000417285 SOWAHDA6NJG2 315 aa25.03■■□□□ 1.6
VEGFA-208ENST00000417285 STMND1H3BQB6 276 aa25.03■■□□□ 1.6
VEGFA-208ENST00000417285 EPOP01588 193 aa25.03■■□□□ 1.6
VEGFA-208ENST00000417285 PIRTP0C851 137 aa25.03■■□□□ 1.6
VEGFA-208ENST00000417285 PECAM1P16284 738 aaPredicted RBP25.03■■□□□ 1.6
VEGFA-208ENST00000417285 ZNF8P17098 575 aaPredicted RBP25.03■■□□□ 1.6
VEGFA-208ENST00000417285 PPM1FP49593 454 aaPredicted RBP25.03■■□□□ 1.6
VEGFA-208ENST00000417285 EPHA4P54764 986 aa25.03■■□□□ 1.6
VEGFA-208ENST00000417285 FAM182AQ5T1J6 154 aa25.03■■□□□ 1.6
VEGFA-208ENST00000417285 GLYATL1Q969I3 302 aa25.03■■□□□ 1.6
VEGFA-208ENST00000417285 VAT1Q99536 393 aa25.03■■□□□ 1.6
VEGFA-208ENST00000417285 TRABDQ9H4I3 376 aa25.03■■□□□ 1.6
VEGFA-208ENST00000417285 A6NCN8 305 aa25.02■■□□□ 1.6
VEGFA-208ENST00000417285 B4E171 279 aa25.02■■□□□ 1.6
VEGFA-208ENST00000417285 SNX2O60749 519 aa25.02■■□□□ 1.6
VEGFA-208ENST00000417285 PMPCBO75439 489 aa25.02■■□□□ 1.6
VEGFA-208ENST00000417285 MT-CYBP00156 380 aaPredicted RBP25.02■■□□□ 1.6
VEGFA-208ENST00000417285 FECHP22830 423 aa25.02■■□□□ 1.6
VEGFA-208ENST00000417285 CSF2RBP32927 897 aa25.02■■□□□ 1.6
VEGFA-208ENST00000417285 TSPAN7P41732 249 aa25.02■■□□□ 1.6
VEGFA-208ENST00000417285 TNNT3P45378 269 aaPredicted RBP25.02■■□□□ 1.6
VEGFA-208ENST00000417285 ALS2CLQ60I27 953 aa25.02■■□□□ 1.6
VEGFA-208ENST00000417285 ADGRG6Q86SQ4 1221 aa25.02■■□□□ 1.6
VEGFA-208ENST00000417285 MED8Q96G25 268 aa25.02■■□□□ 1.6
VEGFA-208ENST00000417285 DDA1Q9BW61 102 aa25.02■■□□□ 1.6
VEGFA-208ENST00000417285 ZMYND15Q9H091 742 aa25.02■■□□□ 1.6
VEGFA-208ENST00000417285 ADGRG1Q9Y653 693 aa25.02■■□□□ 1.6
VEGFA-208ENST00000417285 CHUKO15111 745 aa25.01■■□□□ 1.59
VEGFA-208ENST00000417285 KMOO15229 486 aa25.01■■□□□ 1.59
VEGFA-208ENST00000417285 VEGFDO43915 354 aa25.01■■□□□ 1.59
VEGFA-208ENST00000417285 ITGB2P05107 769 aa25.01■■□□□ 1.59
VEGFA-208ENST00000417285 MPSTP25325 297 aa25.01■■□□□ 1.59
VEGFA-208ENST00000417285 MARCKSL1P49006 195 aa25.01■■□□□ 1.59
VEGFA-208ENST00000417285 ADCY2Q08462 1091 aa25.01■■□□□ 1.59
VEGFA-208ENST00000417285 NFATC2Q13469 925 aa25.01■■□□□ 1.59
VEGFA-208ENST00000417285 PPP2R5EQ16537 467 aa25.01■■□□□ 1.59
VEGFA-208ENST00000417285 ZDHHC20Q5W0Z9 365 aa25.01■■□□□ 1.59
VEGFA-208ENST00000417285 ZC3H18Q86VM9 953 aaKnown RBP25.01■■□□□ 1.59
VEGFA-208ENST00000417285 PLEKHG4BQ96PX9 1271 aa25.01■■□□□ 1.59
VEGFA-208ENST00000417285 KLC4Q9NSK0 619 aa25.01■■□□□ 1.59
VEGFA-208ENST00000417285 SLC39A1Q9NY26 324 aa25.01■■□□□ 1.59
VEGFA-208ENST00000417285 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP25.01■■□□□ 1.59
VEGFA-208ENST00000417285 KLHL8Q9P2G9 620 aaPredicted RBP25.01■■□□□ 1.59
VEGFA-208ENST00000417285 CPNE7Q9UBL6 633 aa25.01■■□□□ 1.59
VEGFA-208ENST00000417285 SCN8AQ9UQD0 1980 aa25■■□□□ 1.59
VEGFA-208ENST00000417285 COL6A6A6NMZ7 2263 aa25■■□□□ 1.59
VEGFA-208ENST00000417285 LOC285095A0A1B0GVY8 99 aa25■■□□□ 1.59
VEGFA-208ENST00000417285 HACD1B0YJ81 288 aa25■■□□□ 1.59
VEGFA-208ENST00000417285 SLC4A1P02730 911 aa25■■□□□ 1.59
VEGFA-208ENST00000417285 BPIP17213 487 aa25■■□□□ 1.59
VEGFA-208ENST00000417285 HMGCLP35914 325 aa25■■□□□ 1.59
VEGFA-208ENST00000417285 NAP1L1P55209 391 aaKnown RBP25■■□□□ 1.59
VEGFA-208ENST00000417285 RAB15P59190 212 aa25■■□□□ 1.59
VEGFA-208ENST00000417285 WASHC5Q12768 1159 aa25■■□□□ 1.59
VEGFA-208ENST00000417285 LY6DQ14210 128 aa25■■□□□ 1.59
VEGFA-208ENST00000417285 ZNF761Q86XN6 746 aaPredicted RBP25■■□□□ 1.59
VEGFA-208ENST00000417285 DTX3LQ8TDB6 740 aa25■■□□□ 1.59
VEGFA-208ENST00000417285 NCSTNQ92542 709 aa25■■□□□ 1.59
VEGFA-208ENST00000417285 KRT35Q92764 455 aa25■■□□□ 1.59
VEGFA-208ENST00000417285 HAUS1Q96CS2 278 aa25■■□□□ 1.59
VEGFA-208ENST00000417285 UBP1Q9NZI7 540 aa25■■□□□ 1.59
VEGFA-208ENST00000417285 TMEM9Q9P0T7 183 aa25■■□□□ 1.59
VEGFA-208ENST00000417285 XRCC1P18887 633 aaPredicted RBP24.99■■□□□ 1.59
VEGFA-208ENST00000417285 CD68P34810 354 aaPredicted RBP24.99■■□□□ 1.59
VEGFA-208ENST00000417285 ATP1A2P50993 1020 aa24.99■■□□□ 1.59
VEGFA-208ENST00000417285 WNT3AP56704 352 aa24.99■■□□□ 1.59
VEGFA-208ENST00000417285 COPS2P61201 443 aa24.99■■□□□ 1.59
VEGFA-208ENST00000417285 DCAF12Q5T6F0 453 aa24.99■■□□□ 1.59
VEGFA-208ENST00000417285 PID1Q7Z2X4 250 aa24.99■■□□□ 1.59
VEGFA-208ENST00000417285 ARHGAP22Q7Z5H3 698 aa24.99■■□□□ 1.59
VEGFA-208ENST00000417285 ART4Q93070 314 aa24.99■■□□□ 1.59
VEGFA-208ENST00000417285 QKIQ96PU8 341 aaKnown RBP eCLIP24.99■■□□□ 1.59
VEGFA-208ENST00000417285 TEFMQ96QE5 360 aaKnown RBP24.99■■□□□ 1.59
VEGFA-208ENST00000417285 VPS35Q96QK1 796 aa24.99■■□□□ 1.59
VEGFA-208ENST00000417285 UCK1Q9HA47 277 aa24.99■■□□□ 1.59
VEGFA-208ENST00000417285 ARFGAP3Q9NP61 516 aa24.99■■□□□ 1.59
VEGFA-208ENST00000417285 PRDM8Q9NQV8 689 aa24.99■■□□□ 1.59
VEGFA-208ENST00000417285 HACD3Q9P035 362 aa24.99■■□□□ 1.59
VEGFA-208ENST00000417285 TRHDEQ9UKU6 1024 aa24.99■■□□□ 1.59
VEGFA-208ENST00000417285 CDK14O94921 469 aa24.98■■□□□ 1.59
VEGFA-208ENST00000417285 ZNF7P17097 686 aaPredicted RBP24.98■■□□□ 1.59
VEGFA-208ENST00000417285 NFKB1P19838 968 aa24.98■■□□□ 1.59
VEGFA-208ENST00000417285 CTNNA1P35221 906 aaKnown RBP24.98■■□□□ 1.59
VEGFA-208ENST00000417285 ZNF648Q5T619 568 aaPredicted RBP24.98■■□□□ 1.59
VEGFA-208ENST00000417285 CCDC181Q5TID7 509 aa24.98■■□□□ 1.59
VEGFA-208ENST00000417285 BBS12Q6ZW61 710 aa24.98■■□□□ 1.59
VEGFA-208ENST00000417285 LRRTM4Q86VH4 590 aa24.98■■□□□ 1.59
VEGFA-208ENST00000417285 BRSK1Q8TDC3 778 aa24.98■■□□□ 1.59
VEGFA-208ENST00000417285 HTR3CQ8WXA8 447 aa24.98■■□□□ 1.59
VEGFA-208ENST00000417285 FCRL5Q96RD9 977 aa24.98■■□□□ 1.59
VEGFA-208ENST00000417285 TIMM29Q9BSF4 260 aa24.98■■□□□ 1.59
VEGFA-208ENST00000417285 HEMGNQ9BXL5 484 aa24.98■■□□□ 1.59
VEGFA-208ENST00000417285 OCIAD1Q9NX40 245 aa24.98■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms