RNA–Protein interactions for RNA: ENST00000417137.5

SMARCB1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 3

Gene SMARCB1, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-205ENST00000417137 MSH3P20585 1137 aa22.83■■□□□ 1.25
SMARCB1-205ENST00000417137 CTBSQ01459 385 aa22.83■■□□□ 1.25
SMARCB1-205ENST00000417137 CACNG1Q06432 222 aa22.83■■□□□ 1.25
SMARCB1-205ENST00000417137 TCEA2Q15560 299 aa22.83■■□□□ 1.25
SMARCB1-205ENST00000417137 PROX2Q3B8N5 592 aa22.83■■□□□ 1.25
SMARCB1-205ENST00000417137 C6orf132Q5T0Z8 1188 aa22.83■■□□□ 1.25
SMARCB1-205ENST00000417137 ZNF648Q5T619 568 aaPredicted RBP22.83■■□□□ 1.25
SMARCB1-205ENST00000417137 GPRC6AQ5T6X5 926 aa22.83■■□□□ 1.25
SMARCB1-205ENST00000417137 ANKRD22Q5VYY1 191 aa22.83■■□□□ 1.25
SMARCB1-205ENST00000417137 NAT8LQ8N9F0 302 aa22.83■■□□□ 1.25
SMARCB1-205ENST00000417137 FAM46DQ8NEK8 389 aa22.83■■□□□ 1.25
SMARCB1-205ENST00000417137 KIF18AQ8NI77 898 aa22.83■■□□□ 1.25
SMARCB1-205ENST00000417137 APOLD1Q96LR9 279 aa22.83■■□□□ 1.25
SMARCB1-205ENST00000417137 CHRAC1Q9NRG0 131 aa22.83■■□□□ 1.25
SMARCB1-205ENST00000417137 MAGEB16A2A368 324 aa22.82■■□□□ 1.24
SMARCB1-205ENST00000417137 CCDC78A2IDD5 438 aa22.82■■□□□ 1.24
SMARCB1-205ENST00000417137 AGAP14A8MT82 685 aa22.82■■□□□ 1.24
SMARCB1-205ENST00000417137 SMAPO00193 183 aa22.82■■□□□ 1.24
SMARCB1-205ENST00000417137 CCL22O00626 93 aa22.82■■□□□ 1.24
SMARCB1-205ENST00000417137 NDC80O14777 642 aa22.82■■□□□ 1.24
SMARCB1-205ENST00000417137 CHUKO15111 745 aa22.82■■□□□ 1.24
SMARCB1-205ENST00000417137 KMOO15229 486 aa22.82■■□□□ 1.24
SMARCB1-205ENST00000417137 TTI1O43156 1089 aa22.82■■□□□ 1.24
SMARCB1-205ENST00000417137 MTX2O75431 263 aa22.82■■□□□ 1.24
SMARCB1-205ENST00000417137 MGAT1P26572 445 aa22.82■■□□□ 1.24
SMARCB1-205ENST00000417137 AKT1P31749 480 aa22.82■■□□□ 1.24
SMARCB1-205ENST00000417137 PRAMEP78395 509 aa22.82■■□□□ 1.24
SMARCB1-205ENST00000417137 WHAMMP3Q1A5X7 153 aa22.82■■□□□ 1.24
SMARCB1-205ENST00000417137 RNASEH2BQ5TBB1 312 aaKnown RBP22.82■■□□□ 1.24
SMARCB1-205ENST00000417137 ZNF534Q76KX8 674 aa22.82■■□□□ 1.24
SMARCB1-205ENST00000417137 CHST15Q7LFX5 561 aaPredicted RBP22.82■■□□□ 1.24
SMARCB1-205ENST00000417137 TAS2R42Q7RTR8 314 aa22.82■■□□□ 1.24
SMARCB1-205ENST00000417137 LRRTM4Q86VH4 590 aa22.82■■□□□ 1.24
SMARCB1-205ENST00000417137 HOOK3Q86VS8 718 aa22.82■■□□□ 1.24
SMARCB1-205ENST00000417137 TBRG4Q969Z0 631 aaKnown RBP eCLIP22.82■■□□□ 1.242e-10■■■■■ 34
SMARCB1-205ENST00000417137 DCUN1D1Q96GG9 259 aa22.82■■□□□ 1.24
SMARCB1-205ENST00000417137 TTC1Q99614 292 aa22.82■■□□□ 1.24
SMARCB1-205ENST00000417137 BOCQ9BWV1 1114 aa22.82■■□□□ 1.24
SMARCB1-205ENST00000417137 MRM3Q9HC36 420 aaKnown RBP22.82■■□□□ 1.24
SMARCB1-205ENST00000417137 FAM187AA6NFU0 413 aa22.81■■□□□ 1.24
SMARCB1-205ENST00000417137 SDR42E2A6NKP2 422 aa22.81■■□□□ 1.24
SMARCB1-205ENST00000417137 CFAP99D6REC4 459 aa22.81■■□□□ 1.24
SMARCB1-205ENST00000417137 GOLGA8MH3BSY2 632 aa22.81■■□□□ 1.24
SMARCB1-205ENST00000417137 TMEM63AO94886 807 aa22.81■■□□□ 1.24
SMARCB1-205ENST00000417137 CDK4P11802 303 aa22.81■■□□□ 1.24
SMARCB1-205ENST00000417137 CKMT1AP12532 417 aa22.81■■□□□ 1.24
SMARCB1-205ENST00000417137 ACVR1Q04771 509 aa22.81■■□□□ 1.24
SMARCB1-205ENST00000417137 NR0B2Q15466 257 aa22.81■■□□□ 1.24
SMARCB1-205ENST00000417137 IZUMO3Q5VZ72 239 aa22.81■■□□□ 1.24
SMARCB1-205ENST00000417137 ZNF572Q7Z3I7 529 aaPredicted RBP22.81■■□□□ 1.24
SMARCB1-205ENST00000417137 CAND1Q86VP6 1230 aaKnown RBP22.81■■□□□ 1.24
SMARCB1-205ENST00000417137 NXPE1Q8N323 547 aa22.81■■□□□ 1.24
SMARCB1-205ENST00000417137 OR13J1Q8NGT2 312 aa22.81■■□□□ 1.24
SMARCB1-205ENST00000417137 CCL4L1Q8NHW4 92 aa22.81■■□□□ 1.24
SMARCB1-205ENST00000417137 HDAC10Q969S8 669 aa22.81■■□□□ 1.24
SMARCB1-205ENST00000417137 ZNF514Q96K75 400 aaPredicted RBP22.81■■□□□ 1.24
SMARCB1-205ENST00000417137 KIFC1Q9BW19 673 aa22.81■■□□□ 1.24
SMARCB1-205ENST00000417137 DPEP2Q9H4A9 486 aa22.81■■□□□ 1.24
SMARCB1-205ENST00000417137 FAM96AQ9H5X1 160 aa22.81■■□□□ 1.24
SMARCB1-205ENST00000417137 SAMD15Q9P1V8 674 aa22.81■■□□□ 1.24
SMARCB1-205ENST00000417137 PRKAB1Q9Y478 270 aa22.81■■□□□ 1.24
SMARCB1-205ENST00000417137 GPR39O43194 453 aa22.8■■□□□ 1.24
SMARCB1-205ENST00000417137 AVILO75366 819 aa22.8■■□□□ 1.24
SMARCB1-205ENST00000417137 ACTR1BP42025 376 aa22.8■■□□□ 1.24
SMARCB1-205ENST00000417137 ARSDP51689 593 aa22.8■■□□□ 1.24
SMARCB1-205ENST00000417137 ACTR1AP61163 376 aa22.8■■□□□ 1.24
SMARCB1-205ENST00000417137 CRADDP78560 199 aa22.8■■□□□ 1.24
SMARCB1-205ENST00000417137 CASC4Q6P4E1 433 aa22.8■■□□□ 1.24
SMARCB1-205ENST00000417137 SLC30A9Q6PML9 568 aa22.8■■□□□ 1.24
SMARCB1-205ENST00000417137 AFTPHQ6ULP2 937 aa22.8■■□□□ 1.24
SMARCB1-205ENST00000417137 NRROSQ86YC3 692 aa22.8■■□□□ 1.24
SMARCB1-205ENST00000417137 ARL10Q8N8L6 244 aa22.8■■□□□ 1.24
SMARCB1-205ENST00000417137 OR6P1Q8NGX9 317 aa22.8■■□□□ 1.24
SMARCB1-205ENST00000417137 SGSM3Q96HU1 749 aa22.8■■□□□ 1.24
SMARCB1-205ENST00000417137 SERPINB12Q96P63 405 aa22.8■■□□□ 1.24
SMARCB1-205ENST00000417137 COPS8Q99627 209 aa22.8■■□□□ 1.24
SMARCB1-205ENST00000417137 SYBUQ9NX95 663 aa22.8■■□□□ 1.24
SMARCB1-205ENST00000417137 TAAR2Q9P1P5 351 aa22.8■■□□□ 1.24
SMARCB1-205ENST00000417137 GULP1Q9UBP9 304 aa22.8■■□□□ 1.24
SMARCB1-205ENST00000417137 SLC2A6Q9UGQ3 507 aa22.8■■□□□ 1.24
SMARCB1-205ENST00000417137 PCDHGA1Q9Y5H4 931 aa22.8■■□□□ 1.24
SMARCB1-205ENST00000417137 DNMT3AQ9Y6K1 912 aaPredicted RBP22.8■■□□□ 1.24
SMARCB1-205ENST00000417137 TDRD6O60522 2096 aaKnown RBP22.79■■□□□ 1.24
SMARCB1-205ENST00000417137 CCDC162PA2VCL2 907 aa22.79■■□□□ 1.24
SMARCB1-205ENST00000417137 EFCAB8A8MWE9 144 aa22.79■■□□□ 1.24
SMARCB1-205ENST00000417137 KCNJ13O60928 360 aa22.79■■□□□ 1.24
SMARCB1-205ENST00000417137 TRIM16O95361 564 aa22.79■■□□□ 1.24
SMARCB1-205ENST00000417137 FTH1P19P0C7X4 201 aa22.79■■□□□ 1.24
SMARCB1-205ENST00000417137 VCLP18206 1134 aa22.79■■□□□ 1.24
SMARCB1-205ENST00000417137 ACP1P24666 158 aa22.79■■□□□ 1.24
SMARCB1-205ENST00000417137 IVDP26440 423 aa22.79■■□□□ 1.24
SMARCB1-205ENST00000417137 AK4P27144 223 aaPredicted RBP22.79■■□□□ 1.24
SMARCB1-205ENST00000417137 PPARGP37231 505 aaPredicted RBP22.79■■□□□ 1.24
SMARCB1-205ENST00000417137 C2orf54Q08AI8 447 aa22.79■■□□□ 1.24
SMARCB1-205ENST00000417137 ILKQ13418 452 aa22.79■■□□□ 1.24
SMARCB1-205ENST00000417137 MORF4L2Q15014 288 aa22.79■■□□□ 1.24
SMARCB1-205ENST00000417137 KHDC1Q4VXA5 237 aaKnown RBP22.79■■□□□ 1.24
SMARCB1-205ENST00000417137 N4BP2L1Q5TBK1 243 aaPredicted RBP22.79■■□□□ 1.24
SMARCB1-205ENST00000417137 LYPLAL1Q5VWZ2 237 aa22.79■■□□□ 1.24
SMARCB1-205ENST00000417137 OGFOD3Q6PK18 319 aa22.79■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms