RNA–Protein interactions for RNA: ENST00000415950.4

SCN1B-202, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SCN1B, Length 4,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-202ENST00000415950 IL18R1Q13478 541 aa12.82□□□□□ -0.36
SCN1B-202ENST00000415950 CEACAM7Q14002 265 aa12.82□□□□□ -0.36
SCN1B-202ENST00000415950 LAPTM4AQ15012 233 aa12.82□□□□□ -0.36
SCN1B-202ENST00000415950 NDUFAF6Q330K2 333 aa12.82□□□□□ -0.36
SCN1B-202ENST00000415950 RABL3Q5HYI8 236 aa12.82□□□□□ -0.36
SCN1B-202ENST00000415950 INTS11Q5TA45 600 aaKnown RBP12.82□□□□□ -0.36
SCN1B-202ENST00000415950 C9orf57Q5W0N0 161 aa12.82□□□□□ -0.36
SCN1B-202ENST00000415950 NAPRTQ6XQN6 538 aa12.82□□□□□ -0.36
SCN1B-202ENST00000415950 CIR1Q86X95 450 aaPredicted RBP12.82□□□□□ -0.36
SCN1B-202ENST00000415950 C12orf43Q96C57 262 aaKnown RBP12.82□□□□□ -0.36
SCN1B-202ENST00000415950 PPP3R2Q96LZ3 170 aa12.82□□□□□ -0.36
SCN1B-202ENST00000415950 PDZD7Q9H5P4 517 aa12.82□□□□□ -0.36
SCN1B-202ENST00000415950 CNOT6Q9ULM6 557 aaKnown RBP12.82□□□□□ -0.36
SCN1B-202ENST00000415950 AKAP12Q02952 1782 aa12.82□□□□□ -0.36
SCN1B-202ENST00000415950 SLC1A2P43004 574 aa12.82□□□□□ -0.36
SCN1B-202ENST00000415950 ABRQ12979 859 aa12.82□□□□□ -0.36
SCN1B-202ENST00000415950 GK3PQ14409 553 aa12.82□□□□□ -0.36
SCN1B-202ENST00000415950 ZNF846Q147U1 533 aa12.82□□□□□ -0.36
SCN1B-202ENST00000415950 POTEHQ6S545 545 aa12.82□□□□□ -0.36
SCN1B-202ENST00000415950 MAPK15Q8TD08 544 aa12.82□□□□□ -0.36
SCN1B-202ENST00000415950 CLIP3Q96DZ5 547 aa12.82□□□□□ -0.36
SCN1B-202ENST00000415950 CDK15Q96Q40 435 aa12.82□□□□□ -0.36
SCN1B-202ENST00000415950 CCDC106Q9BWC9 280 aa12.82□□□□□ -0.36
SCN1B-202ENST00000415950 ITM2CQ9NQX7 267 aa12.82□□□□□ -0.36
SCN1B-202ENST00000415950 FETUBQ9UGM5 382 aa12.82□□□□□ -0.36
SCN1B-202ENST00000415950 MAPKAPK2P49137 400 aa12.81□□□□□ -0.36
SCN1B-202ENST00000415950 MERTKQ12866 999 aa12.81□□□□□ -0.36
SCN1B-202ENST00000415950 PSMD5Q16401 504 aa12.81□□□□□ -0.36
SCN1B-202ENST00000415950 RBM20Q5T481 1227 aaKnown RBP12.81□□□□□ -0.36
SCN1B-202ENST00000415950 OR10A6Q8NH74 314 aa12.81□□□□□ -0.36
SCN1B-202ENST00000415950 MYDGFQ969H8 173 aa12.81□□□□□ -0.36
SCN1B-202ENST00000415950 ZDHHC6Q9H6R6 413 aa12.81□□□□□ -0.36
SCN1B-202ENST00000415950 ABCC13Q9NSE7 274 aa12.81□□□□□ -0.36
SCN1B-202ENST00000415950 RPS6KA6Q9UK32 745 aa12.81□□□□□ -0.36
SCN1B-202ENST00000415950 MAFBQ9Y5Q3 323 aaPredicted RBP12.81□□□□□ -0.36
SCN1B-202ENST00000415950 ST14Q9Y5Y6 855 aa12.81□□□□□ -0.36
SCN1B-202ENST00000415950 MICAL3Q7RTP6 2002 aa12.81□□□□□ -0.36
SCN1B-202ENST00000415950 WARSP23381 471 aaKnown RBP12.81□□□□□ -0.36
SCN1B-202ENST00000415950 OAZ1P54368 228 aa12.81□□□□□ -0.36
SCN1B-202ENST00000415950 PIGFQ07326 219 aa12.81□□□□□ -0.36
SCN1B-202ENST00000415950 PLD1Q13393 1074 aa12.81□□□□□ -0.36
SCN1B-202ENST00000415950 SYT16Q17RD7 645 aa12.81□□□□□ -0.36
SCN1B-202ENST00000415950 AHSA2Q719I0 299 aa12.81□□□□□ -0.36
SCN1B-202ENST00000415950 NLNQ9BYT8 704 aa12.81□□□□□ -0.36
SCN1B-202ENST00000415950 RHOBTB2Q9BYZ6 727 aa12.81□□□□□ -0.36
SCN1B-202ENST00000415950 USP29Q9HBJ7 922 aa12.81□□□□□ -0.36
SCN1B-202ENST00000415950 MCUBQ9NWR8 336 aa12.81□□□□□ -0.36
SCN1B-202ENST00000415950 OXSMQ9NWU1 459 aa12.81□□□□□ -0.36
SCN1B-202ENST00000415950 TLL2Q9Y6L7 1015 aa12.81□□□□□ -0.36
SCN1B-202ENST00000415950 KLHL33A6NCF5 533 aa12.81□□□□□ -0.36
SCN1B-202ENST00000415950 BTN3A3O00478 584 aa12.81□□□□□ -0.36
SCN1B-202ENST00000415950 IGSF6O95976 241 aa12.81□□□□□ -0.36
SCN1B-202ENST00000415950 PRG2P13727 222 aa12.81□□□□□ -0.36
SCN1B-202ENST00000415950 KPNA1P52294 538 aaPredicted RBP12.81□□□□□ -0.36
SCN1B-202ENST00000415950 LAPTM5Q13571 262 aa12.81□□□□□ -0.36
SCN1B-202ENST00000415950 DPYSQ14117 519 aa12.81□□□□□ -0.36
SCN1B-202ENST00000415950 NCBP2-AS2Q69YL0 99 aa12.81□□□□□ -0.36
SCN1B-202ENST00000415950 RTL3Q8N8U3 475 aaKnown RBP12.81□□□□□ -0.36
SCN1B-202ENST00000415950 DRAXINQ8NBI3 349 aaPredicted RBP12.81□□□□□ -0.36
SCN1B-202ENST00000415950 OR4K2Q8NGD2 314 aa12.81□□□□□ -0.36
SCN1B-202ENST00000415950 ZFAND2BQ8WV99 257 aa12.81□□□□□ -0.36
SCN1B-202ENST00000415950 KAT2AQ92830 837 aa12.81□□□□□ -0.36
SCN1B-202ENST00000415950 TAMM41Q96BW9 452 aa12.81□□□□□ -0.36
SCN1B-202ENST00000415950 CENPNQ96H22 339 aaPredicted RBP12.81□□□□□ -0.36
SCN1B-202ENST00000415950 ART5Q96L15 291 aa12.81□□□□□ -0.36
SCN1B-202ENST00000415950 YME1L1Q96TA2 773 aa12.81□□□□□ -0.36
SCN1B-202ENST00000415950 MIR1-1HGQ9H1L0 117 aa12.81□□□□□ -0.36
SCN1B-202ENST00000415950 PIGVQ9NUD9 493 aa12.81□□□□□ -0.36
SCN1B-202ENST00000415950 SNX6Q9UNH7 406 aa12.81□□□□□ -0.36
SCN1B-202ENST00000415950 TBC1D30Q9Y2I9 924 aa12.81□□□□□ -0.36
SCN1B-202ENST00000415950 SF3B1O75533 1304 aaKnown RBP eCLIP12.81□□□□□ -0.368e-6■■■■■ 107
SCN1B-202ENST00000415950 TBX1O43435 398 aa12.81□□□□□ -0.36
SCN1B-202ENST00000415950 NR2F1P10589 423 aa12.81□□□□□ -0.36
SCN1B-202ENST00000415950 PRKACGP22612 351 aa12.81□□□□□ -0.36
SCN1B-202ENST00000415950 CTSKP43235 329 aa12.81□□□□□ -0.36
SCN1B-202ENST00000415950 MAPK9P45984 424 aa12.81□□□□□ -0.36
SCN1B-202ENST00000415950 CASP9P55211 416 aa12.81□□□□□ -0.36
SCN1B-202ENST00000415950 MTAPQ13126 283 aa12.81□□□□□ -0.36
SCN1B-202ENST00000415950 FSCN1Q16658 493 aaKnown RBP12.81□□□□□ -0.36
SCN1B-202ENST00000415950 OR52E8Q6IFG1 317 aa12.81□□□□□ -0.36
SCN1B-202ENST00000415950 PLET1Q6UQ28 207 aa12.81□□□□□ -0.36
SCN1B-202ENST00000415950 PRR23BQ6ZRT6 265 aa12.81□□□□□ -0.36
SCN1B-202ENST00000415950 PIM3Q86V86 326 aa12.81□□□□□ -0.36
SCN1B-202ENST00000415950 GPR65Q8IYL9 337 aa12.81□□□□□ -0.36
SCN1B-202ENST00000415950 TBC1D21Q8IYX1 336 aa12.81□□□□□ -0.36
SCN1B-202ENST00000415950 OR52J3Q8NH60 311 aa12.81□□□□□ -0.36
SCN1B-202ENST00000415950 APOLD1Q96LR9 279 aa12.81□□□□□ -0.36
SCN1B-202ENST00000415950 SYT11Q9BT88 431 aa12.81□□□□□ -0.36
SCN1B-202ENST00000415950 CDC14AQ9UNH5 594 aa12.81□□□□□ -0.36
SCN1B-202ENST00000415950 NPEPPSL1A6NEC2 478 aa12.8□□□□□ -0.36
SCN1B-202ENST00000415950 KLF11O14901 512 aa12.8□□□□□ -0.36
SCN1B-202ENST00000415950 IDO1P14902 403 aa12.8□□□□□ -0.36
SCN1B-202ENST00000415950 SEMG2Q02383 582 aa12.8□□□□□ -0.36
SCN1B-202ENST00000415950 DEF8Q6ZN54 512 aa12.8□□□□□ -0.36
SCN1B-202ENST00000415950 AKAP14Q86UN6 197 aa12.8□□□□□ -0.36
SCN1B-202ENST00000415950 USP7Q93009 1102 aa12.8□□□□□ -0.36
SCN1B-202ENST00000415950 MRPL48Q96GC5 212 aaKnown RBP12.8□□□□□ -0.36
SCN1B-202ENST00000415950 GBA2Q9HCG7 927 aaPredicted RBP12.8□□□□□ -0.36
SCN1B-202ENST00000415950 SIX4Q9UIU6 781 aa12.8□□□□□ -0.36
SCN1B-202ENST00000415950 ZNF214Q9UL59 606 aaPredicted RBP12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms