RNA–Protein interactions for RNA: ENST00000414963.2

SF3B1-204, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 651 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-204ENST00000414963 LRRK1Q38SD2 2015 aa14.1□□□□□ -0.15
SF3B1-204ENST00000414963 VCANP13611 3396 aa14.1□□□□□ -0.15
SF3B1-204ENST00000414963 TRIM49D1C9J1S8 452 aa14.1□□□□□ -0.15
SF3B1-204ENST00000414963 CFAP99D6REC4 459 aa14.1□□□□□ -0.15
SF3B1-204ENST00000414963 PRAMEF26H0Y7S4 382 aa14.1□□□□□ -0.15
SF3B1-204ENST00000414963 H3BMM5 538 aa14.1□□□□□ -0.15
SF3B1-204ENST00000414963 VEGFDO43915 354 aa14.1□□□□□ -0.15
SF3B1-204ENST00000414963 NDUFS2O75306 463 aa14.1□□□□□ -0.15
SF3B1-204ENST00000414963 RFPL1O75677 317 aa14.1□□□□□ -0.15
SF3B1-204ENST00000414963 AP2A2O94973 939 aa14.1□□□□□ -0.15
SF3B1-204ENST00000414963 PCCBP05166 539 aa14.1□□□□□ -0.15
SF3B1-204ENST00000414963 F7P08709 466 aaPredicted RBP14.1□□□□□ -0.15
SF3B1-204ENST00000414963 RALBP11234 206 aa14.1□□□□□ -0.15
SF3B1-204ENST00000414963 PKMP14618 531 aaKnown RBP14.1□□□□□ -0.15
SF3B1-204ENST00000414963 AKT2P31751 481 aa14.1□□□□□ -0.15
SF3B1-204ENST00000414963 IGFALSP35858 605 aa14.1□□□□□ -0.15
SF3B1-204ENST00000414963 GPS2Q13227 327 aa14.1□□□□□ -0.15
SF3B1-204ENST00000414963 INPP5AQ14642 412 aa14.1□□□□□ -0.15
SF3B1-204ENST00000414963 NUMA1Q14980 2115 aa14.1□□□□□ -0.15
SF3B1-204ENST00000414963 TMED2Q15363 201 aa14.1□□□□□ -0.15
SF3B1-204ENST00000414963 KHDC1Q4VXA5 237 aaKnown RBP14.1□□□□□ -0.15
SF3B1-204ENST00000414963 SH2D5Q6ZV89 423 aa14.1□□□□□ -0.15
SF3B1-204ENST00000414963 TRABD2AQ86V40 505 aa14.1□□□□□ -0.15
SF3B1-204ENST00000414963 LONP2Q86WA8 852 aa14.1□□□□□ -0.15
SF3B1-204ENST00000414963 DCLK2Q8N568 766 aa14.1□□□□□ -0.15
SF3B1-204ENST00000414963 GOLGA6L1Q8N7Z2 621 aa14.1□□□□□ -0.15
SF3B1-204ENST00000414963 TMEM145Q8NBT3 493 aa14.1□□□□□ -0.15
SF3B1-204ENST00000414963 ACVR1CQ8NER5 493 aa14.1□□□□□ -0.15
SF3B1-204ENST00000414963 ACMSDQ8TDX5 336 aa14.1□□□□□ -0.15
SF3B1-204ENST00000414963 NELL1Q92832 810 aa14.1□□□□□ -0.15
SF3B1-204ENST00000414963 ARL8AQ96BM9 186 aa14.1□□□□□ -0.15
SF3B1-204ENST00000414963 DCUN1D1Q96GG9 259 aa14.1□□□□□ -0.15
SF3B1-204ENST00000414963 ATP6V1G3Q96LB4 118 aa14.1□□□□□ -0.15
SF3B1-204ENST00000414963 ORAI3Q9BRQ5 295 aa14.1□□□□□ -0.15
SF3B1-204ENST00000414963 BOCQ9BWV1 1114 aa14.1□□□□□ -0.15
SF3B1-204ENST00000414963 CLPBQ9H078 707 aa14.1□□□□□ -0.15
SF3B1-204ENST00000414963 EPHX3Q9H6B9 360 aa14.1□□□□□ -0.15
SF3B1-204ENST00000414963 EBF2Q9HAK2 575 aa14.1□□□□□ -0.15
SF3B1-204ENST00000414963 SENP1Q9P0U3 644 aa14.1□□□□□ -0.15
SF3B1-204ENST00000414963 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.1□□□□□ -0.15
SF3B1-204ENST00000414963 ACTL7BQ9Y614 415 aa14.1□□□□□ -0.15
SF3B1-204ENST00000414963 TRPM6Q9BX84 2022 aa14.1□□□□□ -0.15
SF3B1-204ENST00000414963 FAM95CA0A1B0GW59 222 aa14.09□□□□□ -0.15
SF3B1-204ENST00000414963 A0A1W2PPC4 97 aa14.09□□□□□ -0.15
SF3B1-204ENST00000414963 UBA6A0AVT1 1052 aaPredicted RBP14.09□□□□□ -0.15
SF3B1-204ENST00000414963 GPR89AB7ZAQ6 455 aa14.09□□□□□ -0.15
SF3B1-204ENST00000414963 FPGTO14772 594 aa14.09□□□□□ -0.15
SF3B1-204ENST00000414963 INPP4BO15327 924 aa14.09□□□□□ -0.15
SF3B1-204ENST00000414963 FSBPO95073 299 aa14.09□□□□□ -0.15
SF3B1-204ENST00000414963 MT-ND3P03897 115 aa14.09□□□□□ -0.15
SF3B1-204ENST00000414963 ALDOAP04075 364 aaKnown RBP14.09□□□□□ -0.15
SF3B1-204ENST00000414963 GPR89BP0CG08 455 aa14.09□□□□□ -0.15
SF3B1-204ENST00000414963 ATP1B2P14415 290 aaPredicted RBP14.09□□□□□ -0.15
SF3B1-204ENST00000414963 KRT15P19012 456 aa14.09□□□□□ -0.15
SF3B1-204ENST00000414963 MSH3P20585 1137 aa14.09□□□□□ -0.15
SF3B1-204ENST00000414963 CRABP2P29373 138 aa14.09□□□□□ -0.15
SF3B1-204ENST00000414963 AVPR2P30518 371 aa14.09□□□□□ -0.15
SF3B1-204ENST00000414963 FMO4P31512 558 aa14.09□□□□□ -0.15
SF3B1-204ENST00000414963 ABCG1P45844 678 aa14.09□□□□□ -0.15
SF3B1-204ENST00000414963 FNTBP49356 437 aa14.09□□□□□ -0.15
SF3B1-204ENST00000414963 SERPINB8P50452 374 aa14.09□□□□□ -0.15
SF3B1-204ENST00000414963 PFN3P60673 137 aa14.09□□□□□ -0.15
SF3B1-204ENST00000414963 CDK3Q00526 305 aa14.09□□□□□ -0.15
SF3B1-204ENST00000414963 TIAL1Q01085 375 aaKnown RBP eCLIP14.09□□□□□ -0.151e-7■■■■■ 62.8
SF3B1-204ENST00000414963 CSTF1Q05048 431 aaKnown RBP14.09□□□□□ -0.15
SF3B1-204ENST00000414963 TMEM115Q12893 351 aaPredicted RBP14.09□□□□□ -0.15
SF3B1-204ENST00000414963 BMPR2Q13873 1038 aa14.09□□□□□ -0.15
SF3B1-204ENST00000414963 ZKSCAN8Q15776 578 aaPredicted RBP14.09□□□□□ -0.15
SF3B1-204ENST00000414963 CTSL3PQ5NE16 218 aa14.09□□□□□ -0.15
SF3B1-204ENST00000414963 HECTD2Q5U5R9 776 aa14.09□□□□□ -0.15
SF3B1-204ENST00000414963 FAM45BPQ6NSW5 357 aa14.09□□□□□ -0.15
SF3B1-204ENST00000414963 TSSK4Q6SA08 328 aa14.09□□□□□ -0.15
SF3B1-204ENST00000414963 CCDC91Q7Z6B0 441 aa14.09□□□□□ -0.15
SF3B1-204ENST00000414963 ADGRG6Q86SQ4 1221 aa14.09□□□□□ -0.15
SF3B1-204ENST00000414963 C11orf74Q86VG3 221 aa14.09□□□□□ -0.15
SF3B1-204ENST00000414963 HEATR4Q86WZ0 1026 aa14.09□□□□□ -0.15
SF3B1-204ENST00000414963 FAM174AQ8TBP5 190 aa14.09□□□□□ -0.15
SF3B1-204ENST00000414963 FAM45AQ8TCE6 357 aa14.09□□□□□ -0.15
SF3B1-204ENST00000414963 KCNJ9Q92806 393 aa14.09□□□□□ -0.15
SF3B1-204ENST00000414963 FOXJ1Q92949 421 aa14.09□□□□□ -0.15
SF3B1-204ENST00000414963 TSPAN17Q96FV3 270 aa14.09□□□□□ -0.15
SF3B1-204ENST00000414963 BMFQ96LC9 184 aa14.09□□□□□ -0.15
SF3B1-204ENST00000414963 ZCCHC2Q9C0B9 1178 aaKnown RBP14.09□□□□□ -0.15
SF3B1-204ENST00000414963 DUSP15Q9H1R2 295 aaPredicted RBP14.09□□□□□ -0.15
SF3B1-204ENST00000414963 WDR26Q9H7D7 661 aa14.09□□□□□ -0.15
SF3B1-204ENST00000414963 POPDC3Q9HBV1 291 aa14.09□□□□□ -0.15
SF3B1-204ENST00000414963 LATS2Q9NRM7 1088 aa14.09□□□□□ -0.15
SF3B1-204ENST00000414963 PHPT1Q9NRX4 125 aaPredicted RBP14.09□□□□□ -0.15
SF3B1-204ENST00000414963 KLHL42Q9P2K6 505 aa14.09□□□□□ -0.15
SF3B1-204ENST00000414963 GNPTGQ9UJJ9 305 aa14.09□□□□□ -0.15
SF3B1-204ENST00000414963 MED16Q9Y2X0 877 aa14.09□□□□□ -0.15
SF3B1-204ENST00000414963 ZDBF2Q9HCK1 2354 aa14.08□□□□□ -0.16
SF3B1-204ENST00000414963 HMGB1P1B2RPK0 211 aaPredicted RBP14.08□□□□□ -0.16
SF3B1-204ENST00000414963 F8W8V4 182 aa14.08□□□□□ -0.16
SF3B1-204ENST00000414963 TNFRSF10AO00220 468 aa14.08□□□□□ -0.16
SF3B1-204ENST00000414963 QSOX1O00391 747 aa14.08□□□□□ -0.16
SF3B1-204ENST00000414963 SGTAO43765 313 aa14.08□□□□□ -0.16
SF3B1-204ENST00000414963 MYCLP1P12525 358 aaPredicted RBP14.08□□□□□ -0.16
SF3B1-204ENST00000414963 FDXRP22570 491 aa14.08□□□□□ -0.16
SF3B1-204ENST00000414963 CD27P26842 260 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms