RNA–Protein interactions for RNA: ENST00000414781.1

RAPGEF1-204, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-204ENST00000414781 TCTN2Q96GX1 697 aa13.48□□□□□ -0.25
RAPGEF1-204ENST00000414781 TSGA13Q96PP4 275 aa13.48□□□□□ -0.25
RAPGEF1-204ENST00000414781 DPYSL5Q9BPU6 564 aa13.48□□□□□ -0.25
RAPGEF1-204ENST00000414781 HERPUD2Q9BSE4 406 aa13.48□□□□□ -0.25
RAPGEF1-204ENST00000414781 CEP44Q9C0F1 390 aa13.48□□□□□ -0.25
RAPGEF1-204ENST00000414781 SLC39A8Q9C0K1 460 aa13.48□□□□□ -0.25
RAPGEF1-204ENST00000414781 KLC2Q9H0B6 622 aa13.48□□□□□ -0.25
RAPGEF1-204ENST00000414781 TNKS2Q9H2K2 1166 aa13.48□□□□□ -0.25
RAPGEF1-204ENST00000414781 ZNF212Q9UDV6 495 aa13.48□□□□□ -0.25
RAPGEF1-204ENST00000414781 KLQ9UEF7 1012 aa13.48□□□□□ -0.25
RAPGEF1-204ENST00000414781 DGKBQ9Y6T7 804 aa13.48□□□□□ -0.25
RAPGEF1-204ENST00000414781 ZSCAN5CA6NGD5 496 aaPredicted RBP13.47□□□□□ -0.25
RAPGEF1-204ENST00000414781 TCP11X1B4DZS4 312 aa13.47□□□□□ -0.25
RAPGEF1-204ENST00000414781 SMAD6O43541 496 aaKnown RBP13.47□□□□□ -0.25
RAPGEF1-204ENST00000414781 MFSD11O43934 449 aa13.47□□□□□ -0.25
RAPGEF1-204ENST00000414781 SNAP91O60641 907 aa13.47□□□□□ -0.25
RAPGEF1-204ENST00000414781 TM7SF2O76062 418 aa13.47□□□□□ -0.25
RAPGEF1-204ENST00000414781 SORBS2O94875 1100 aaKnown RBP13.47□□□□□ -0.25
RAPGEF1-204ENST00000414781 GAS8O95995 478 aa13.47□□□□□ -0.25
RAPGEF1-204ENST00000414781 PECAM1P16284 738 aaPredicted RBP13.47□□□□□ -0.25
RAPGEF1-204ENST00000414781 COILP38432 576 aaPredicted RBP13.47□□□□□ -0.25
RAPGEF1-204ENST00000414781 GARSP41250 739 aaKnown RBP13.47□□□□□ -0.25
RAPGEF1-204ENST00000414781 PAPOLAP51003 745 aaKnown RBP13.47□□□□□ -0.25
RAPGEF1-204ENST00000414781 IRAK1P51617 712 aa13.47□□□□□ -0.25
RAPGEF1-204ENST00000414781 SLC20A2Q08357 652 aa13.47□□□□□ -0.25
RAPGEF1-204ENST00000414781 NFATC4Q14934 902 aa13.47□□□□□ -0.25
RAPGEF1-204ENST00000414781 NR1D2Q14995 579 aa13.47□□□□□ -0.25
RAPGEF1-204ENST00000414781 TCEA2Q15560 299 aa13.47□□□□□ -0.25
RAPGEF1-204ENST00000414781 ATP1A1-AS1Q5TC04 95 aa13.47□□□□□ -0.25
RAPGEF1-204ENST00000414781 RETSATQ6NUM9 610 aa13.47□□□□□ -0.25
RAPGEF1-204ENST00000414781 CCDC137Q6PK04 289 aaKnown RBP13.47□□□□□ -0.25
RAPGEF1-204ENST00000414781 SYDE1Q6ZW31 735 aaPredicted RBP13.47□□□□□ -0.25
RAPGEF1-204ENST00000414781 GSTA5Q7RTV2 222 aa13.47□□□□□ -0.25
RAPGEF1-204ENST00000414781 ZNF438Q7Z4V0 828 aa13.47□□□□□ -0.25
RAPGEF1-204ENST00000414781 TAF8Q7Z7C8 310 aa13.47□□□□□ -0.25
RAPGEF1-204ENST00000414781 NPWQ8N729 165 aa13.47□□□□□ -0.25
RAPGEF1-204ENST00000414781 OR4D9Q8NGE8 314 aa13.47□□□□□ -0.25
RAPGEF1-204ENST00000414781 CCHCR1Q8TD31 782 aa13.47□□□□□ -0.25
RAPGEF1-204ENST00000414781 ARHGEF2Q92974 986 aaKnown RBP13.47□□□□□ -0.25
RAPGEF1-204ENST00000414781 FATE1Q969F0 183 aa13.47□□□□□ -0.25
RAPGEF1-204ENST00000414781 HDAC11Q96DB2 347 aa13.47□□□□□ -0.25
RAPGEF1-204ENST00000414781 POM121Q96HA1 1249 aa13.47□□□□□ -0.25
RAPGEF1-204ENST00000414781 CELF6Q96J87 481 aaKnown RBP13.47□□□□□ -0.25
RAPGEF1-204ENST00000414781 OLFM3Q96PB7 478 aa13.47□□□□□ -0.25
RAPGEF1-204ENST00000414781 VAT1Q99536 393 aa13.47□□□□□ -0.25
RAPGEF1-204ENST00000414781 NUDT22Q9BRQ3 303 aa13.47□□□□□ -0.25
RAPGEF1-204ENST00000414781 SPON2Q9BUD6 331 aa13.47□□□□□ -0.25
RAPGEF1-204ENST00000414781 CARD6Q9BX69 1037 aa13.47□□□□□ -0.25
RAPGEF1-204ENST00000414781 SPRY4Q9C004 299 aa13.47□□□□□ -0.25
RAPGEF1-204ENST00000414781 SAE1Q9UBE0 346 aaPredicted RBP13.47□□□□□ -0.25
RAPGEF1-204ENST00000414781 TLK1Q9UKI8 766 aa13.47□□□□□ -0.25
RAPGEF1-204ENST00000414781 C16orf96A6NNT2 1141 aa13.46□□□□□ -0.25
RAPGEF1-204ENST00000414781 B4DGG1 531 aa13.46□□□□□ -0.25
RAPGEF1-204ENST00000414781 B4GAT1O43505 415 aa13.46□□□□□ -0.25
RAPGEF1-204ENST00000414781 KDELR3O43731 214 aa13.46□□□□□ -0.25
RAPGEF1-204ENST00000414781 SLU7O95391 586 aaKnown RBP13.46□□□□□ -0.25
RAPGEF1-204ENST00000414781 TNFP01375 233 aa13.46□□□□□ -0.25
RAPGEF1-204ENST00000414781 PRF1P14222 555 aa13.46□□□□□ -0.25
RAPGEF1-204ENST00000414781 ABL2P42684 1182 aa13.46□□□□□ -0.25
RAPGEF1-204ENST00000414781 PPIDQ08752 370 aaKnown RBP13.46□□□□□ -0.25
RAPGEF1-204ENST00000414781 AP1B1Q10567 949 aa13.46□□□□□ -0.25
RAPGEF1-204ENST00000414781 SLC10A2Q12908 348 aaPredicted RBP13.46□□□□□ -0.25
RAPGEF1-204ENST00000414781 MRPL49Q13405 166 aaKnown RBP13.46□□□□□ -0.25
RAPGEF1-204ENST00000414781 SNX1Q13596 522 aa13.46□□□□□ -0.25
RAPGEF1-204ENST00000414781 DHX34Q14147 1143 aaKnown RBP13.46□□□□□ -0.25
RAPGEF1-204ENST00000414781 GLE1Q53GS7 698 aaKnown RBP13.46□□□□□ -0.25
RAPGEF1-204ENST00000414781 ENPP7Q6UWV6 458 aa13.46□□□□□ -0.25
RAPGEF1-204ENST00000414781 NPNTQ6UXI9 565 aa13.46□□□□□ -0.25
RAPGEF1-204ENST00000414781 C4orf22Q6V702 233 aa13.46□□□□□ -0.25
RAPGEF1-204ENST00000414781 FAM129CQ86XR2 697 aa13.46□□□□□ -0.25
RAPGEF1-204ENST00000414781 ARHGAP12Q8IWW6 846 aa13.46□□□□□ -0.25
RAPGEF1-204ENST00000414781 KLHL7Q8IXQ5 586 aa13.46□□□□□ -0.25
RAPGEF1-204ENST00000414781 NRSN1Q8IZ57 195 aa13.46□□□□□ -0.25
RAPGEF1-204ENST00000414781 UNC5BQ8IZJ1 945 aa13.46□□□□□ -0.25
RAPGEF1-204ENST00000414781 BBS5Q8N3I7 341 aa13.46□□□□□ -0.25
RAPGEF1-204ENST00000414781 TP53I13Q8NBR0 393 aaPredicted RBP13.46□□□□□ -0.25
RAPGEF1-204ENST00000414781 PDCD6IPQ8WUM4 868 aaKnown RBP13.46□□□□□ -0.25
RAPGEF1-204ENST00000414781 ZNF599Q96NL3 588 aa13.46□□□□□ -0.25
RAPGEF1-204ENST00000414781 SP110Q9HB58 689 aa13.46□□□□□ -0.25
RAPGEF1-204ENST00000414781 ATP13A1Q9HD20 1204 aa13.46□□□□□ -0.25
RAPGEF1-204ENST00000414781 RRAGDQ9NQL2 400 aaPredicted RBP13.46□□□□□ -0.25
RAPGEF1-204ENST00000414781 NDFIP2Q9NV92 336 aa13.46□□□□□ -0.25
RAPGEF1-204ENST00000414781 SMARCAL1Q9NZC9 954 aa13.46□□□□□ -0.25
RAPGEF1-204ENST00000414781 PCYOX1Q9UHG3 505 aa13.46□□□□□ -0.25
RAPGEF1-204ENST00000414781 DNPEPQ9ULA0 475 aa13.46□□□□□ -0.25
RAPGEF1-204ENST00000414781 R3HDM2Q9Y2K5 976 aaKnown RBP13.46□□□□□ -0.25
RAPGEF1-204ENST00000414781 PRRC2CQ9Y520 2896 aaKnown RBP13.45□□□□□ -0.26
RAPGEF1-204ENST00000414781 RHPN2P1A8MT19 583 aa13.45□□□□□ -0.26
RAPGEF1-204ENST00000414781 AREL1O15033 823 aa13.45□□□□□ -0.26
RAPGEF1-204ENST00000414781 MATN3O15232 486 aa13.45□□□□□ -0.26
RAPGEF1-204ENST00000414781 INPP4BO15327 924 aa13.45□□□□□ -0.26
RAPGEF1-204ENST00000414781 ECEL1O95672 775 aa13.45□□□□□ -0.26
RAPGEF1-204ENST00000414781 THRAP10827 490 aa13.45□□□□□ -0.26
RAPGEF1-204ENST00000414781 ALDH4A1P30038 563 aa13.45□□□□□ -0.26
RAPGEF1-204ENST00000414781 STAT5AP42229 794 aa13.45□□□□□ -0.26
RAPGEF1-204ENST00000414781 GPR3P46089 330 aa13.45□□□□□ -0.26
RAPGEF1-204ENST00000414781 RENBPP51606 427 aa13.45□□□□□ -0.26
RAPGEF1-204ENST00000414781 CCNHP51946 323 aaPredicted RBP13.45□□□□□ -0.26
RAPGEF1-204ENST00000414781 PGDP52209 483 aa13.45□□□□□ -0.26
RAPGEF1-204ENST00000414781 OR1D5P58170 312 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms