RNA–Protein interactions for RNA: ENST00000412393.5

LINC00342-201, long intergenic non-protein coding RNA 342, humanhuman

TSL 3 BASIC

Gene LINC00342, Length 654 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-201ENST00000412393 A0A1B0GTW7 788 aa5.35□□□□□ -1.55
LINC00342-201ENST00000412393 FAM170AA1A519 330 aa5.35□□□□□ -1.55
LINC00342-201ENST00000412393 TTC34A8MYJ7 566 aa5.35□□□□□ -1.55
LINC00342-201ENST00000412393 F8VZ95 297 aa5.35□□□□□ -1.55
LINC00342-201ENST00000412393 GOLGA8SH3BPF8 625 aa5.35□□□□□ -1.55
LINC00342-201ENST00000412393 PDLIM1O00151 329 aa5.35□□□□□ -1.55
LINC00342-201ENST00000412393 TRAFD1O14545 582 aaPredicted RBP5.35□□□□□ -1.55
LINC00342-201ENST00000412393 RAD51CO43502 376 aa5.35□□□□□ -1.55
LINC00342-201ENST00000412393 MAFKO60675 156 aa5.35□□□□□ -1.55
LINC00342-201ENST00000412393 OPHN1O60890 802 aa5.35□□□□□ -1.55
LINC00342-201ENST00000412393 RNASEH1O60930 286 aaKnown RBP5.35□□□□□ -1.55
LINC00342-201ENST00000412393 KLHL18O94889 574 aa5.35□□□□□ -1.55
LINC00342-201ENST00000412393 GJB6O95452 261 aa5.35□□□□□ -1.55
LINC00342-201ENST00000412393 LSM8O95777 96 aaKnown RBP5.35□□□□□ -1.55
LINC00342-201ENST00000412393 MMEP08473 750 aa5.35□□□□□ -1.55
LINC00342-201ENST00000412393 VIMP08670 466 aaKnown RBP5.35□□□□□ -1.55
LINC00342-201ENST00000412393 CEACAM1P13688 526 aa5.35□□□□□ -1.55
LINC00342-201ENST00000412393 CCNB1P14635 433 aa5.35□□□□□ -1.55
LINC00342-201ENST00000412393 PDGFRAP16234 1089 aa5.35□□□□□ -1.55
LINC00342-201ENST00000412393 PECAM1P16284 738 aaPredicted RBP5.35□□□□□ -1.55
LINC00342-201ENST00000412393 FERP16591 822 aa5.35□□□□□ -1.55
LINC00342-201ENST00000412393 ACSL1P33121 698 aa5.35□□□□□ -1.55
LINC00342-201ENST00000412393 NNMTP40261 264 aa5.35□□□□□ -1.55
LINC00342-201ENST00000412393 MATKP42679 507 aa5.35□□□□□ -1.55
LINC00342-201ENST00000412393 GABRB2P47870 512 aa5.35□□□□□ -1.55
LINC00342-201ENST00000412393 CXCR3P49682 368 aa5.35□□□□□ -1.55
LINC00342-201ENST00000412393 NUMBP49757 651 aa5.35□□□□□ -1.55
LINC00342-201ENST00000412393 SULT1E1P49888 294 aa5.35□□□□□ -1.55
LINC00342-201ENST00000412393 PLK1P53350 603 aa5.35□□□□□ -1.55
LINC00342-201ENST00000412393 CLNS1AP54105 237 aaKnown RBP5.35□□□□□ -1.55
LINC00342-201ENST00000412393 SLC18A1P54219 525 aa5.35□□□□□ -1.55
LINC00342-201ENST00000412393 POLR2FP61218 127 aaKnown RBP5.35□□□□□ -1.55
LINC00342-201ENST00000412393 NOMO3P69849 1222 aa5.35□□□□□ -1.55
LINC00342-201ENST00000412393 ECT2LQ008S8 904 aa5.35□□□□□ -1.55
LINC00342-201ENST00000412393 DEUP1Q05D60 604 aa5.35□□□□□ -1.55
LINC00342-201ENST00000412393 SULT2A1Q06520 285 aa5.35□□□□□ -1.55
LINC00342-201ENST00000412393 SEMA3BQ13214 749 aa5.35□□□□□ -1.55
LINC00342-201ENST00000412393 ZNF177Q13360 481 aaPredicted RBP5.35□□□□□ -1.55
LINC00342-201ENST00000412393 SLC12A1Q13621 1099 aa5.35□□□□□ -1.55
LINC00342-201ENST00000412393 COL9A2Q14055 689 aaPredicted RBP5.35□□□□□ -1.55
LINC00342-201ENST00000412393 RBBP5Q15291 538 aaKnown RBP5.35□□□□□ -1.55
LINC00342-201ENST00000412393 RPS6KA1Q15418 735 aa5.35□□□□□ -1.55
LINC00342-201ENST00000412393 EMC4Q5J8M3 183 aa5.35□□□□□ -1.55
LINC00342-201ENST00000412393 FAM102AQ5T9C2 384 aaPredicted RBP5.35□□□□□ -1.55
LINC00342-201ENST00000412393 DCAF12L1Q5VU92 463 aa5.35□□□□□ -1.55
LINC00342-201ENST00000412393 OTUD1Q5VV17 481 aaPredicted RBP5.35□□□□□ -1.55
LINC00342-201ENST00000412393 KCTD16Q68DU8 428 aa5.35□□□□□ -1.55
LINC00342-201ENST00000412393 DUPD1Q68J44 220 aa5.35□□□□□ -1.55
LINC00342-201ENST00000412393 FBXL22Q6P050 247 aa5.35□□□□□ -1.55
LINC00342-201ENST00000412393 TRPM8Q7Z2W7 1104 aa5.35□□□□□ -1.55
LINC00342-201ENST00000412393 CPLX4Q7Z7G2 160 aa5.35□□□□□ -1.55
LINC00342-201ENST00000412393 NOP9Q86U38 636 aaKnown RBP5.35□□□□□ -1.55
LINC00342-201ENST00000412393 HOOK3Q86VS8 718 aa5.35□□□□□ -1.55
LINC00342-201ENST00000412393 ZNF677Q86XU0 584 aa5.35□□□□□ -1.55
LINC00342-201ENST00000412393 XYLT1Q86Y38 959 aa5.35□□□□□ -1.55
LINC00342-201ENST00000412393 GSPT2Q8IYD1 628 aaKnown RBP5.35□□□□□ -1.55
LINC00342-201ENST00000412393 SYCE1Q8N0S2 351 aa5.35□□□□□ -1.55
LINC00342-201ENST00000412393 ZCCHC9Q8N567 271 aaKnown RBP5.35□□□□□ -1.55
LINC00342-201ENST00000412393 CCDC63Q8NA47 563 aa5.35□□□□□ -1.55
LINC00342-201ENST00000412393 KDM1BQ8NB78 822 aa5.35□□□□□ -1.55
LINC00342-201ENST00000412393 DEFB124Q8NES8 71 aa5.35□□□□□ -1.55
LINC00342-201ENST00000412393 OR2I1PQ8NGU4 316 aa5.35□□□□□ -1.55
LINC00342-201ENST00000412393 GANCQ8TET4 914 aa5.35□□□□□ -1.55
LINC00342-201ENST00000412393 NSMCE1Q8WV22 266 aa5.35□□□□□ -1.55
LINC00342-201ENST00000412393 SNX19Q92543 992 aa5.35□□□□□ -1.55
LINC00342-201ENST00000412393 IGSF8Q969P0 613 aa5.35□□□□□ -1.55
LINC00342-201ENST00000412393 HES6Q96HZ4 224 aa5.35□□□□□ -1.55
LINC00342-201ENST00000412393 RPL10LQ96L21 214 aaKnown RBP5.35□□□□□ -1.55
LINC00342-201ENST00000412393 RPRD1AQ96P16 312 aaPredicted RBP5.35□□□□□ -1.55
LINC00342-201ENST00000412393 TBCBQ99426 244 aa5.35□□□□□ -1.55
LINC00342-201ENST00000412393 NAP1L3Q99457 506 aaPredicted RBP5.35□□□□□ -1.55
LINC00342-201ENST00000412393 NPY6RQ99463 290 aa5.35□□□□□ -1.55
LINC00342-201ENST00000412393 ZDHHC5Q9C0B5 715 aa5.35□□□□□ -1.55
LINC00342-201ENST00000412393 BTBD1Q9H0C5 482 aa5.35□□□□□ -1.55
LINC00342-201ENST00000412393 SIK2Q9H0K1 926 aa5.35□□□□□ -1.55
LINC00342-201ENST00000412393 RAB17Q9H0T7 212 aa5.35□□□□□ -1.55
LINC00342-201ENST00000412393 RSPH9Q9H1X1 276 aaPredicted RBP5.35□□□□□ -1.55
LINC00342-201ENST00000412393 PABPC3Q9H361 631 aaKnown RBP5.35□□□□□ -1.55
LINC00342-201ENST00000412393 SLC32A1Q9H598 525 aa5.35□□□□□ -1.55
LINC00342-201ENST00000412393 WDCPQ9H6R7 721 aa5.35□□□□□ -1.55
LINC00342-201ENST00000412393 SUDS3Q9H7L9 328 aaPredicted RBP5.35□□□□□ -1.55
LINC00342-201ENST00000412393 NLRC4Q9NPP4 1024 aa5.35□□□□□ -1.55
LINC00342-201ENST00000412393 FAM207AQ9NSI2 230 aaPredicted RBP5.35□□□□□ -1.55
LINC00342-201ENST00000412393 ZDHHC18Q9NUE0 388 aa5.35□□□□□ -1.55
LINC00342-201ENST00000412393 AURKAIP1Q9NWT8 199 aaPredicted RBP5.35□□□□□ -1.55
LINC00342-201ENST00000412393 FBXL12Q9NXK8 326 aa5.35□□□□□ -1.55
LINC00342-201ENST00000412393 ETAA1Q9NY74 926 aa5.35□□□□□ -1.55
LINC00342-201ENST00000412393 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP5.35□□□□□ -1.55
LINC00342-201ENST00000412393 CNOT8Q9UFF9 292 aaKnown RBP5.35□□□□□ -1.55
LINC00342-201ENST00000412393 EIF2B4Q9UI10 523 aaKnown RBP5.35□□□□□ -1.55
LINC00342-201ENST00000412393 SLCO3A1Q9UIG8 710 aa5.35□□□□□ -1.55
LINC00342-201ENST00000412393 SLC25A13Q9UJS0 675 aa5.35□□□□□ -1.55
LINC00342-201ENST00000412393 VANGL2Q9ULK5 521 aa5.35□□□□□ -1.55
LINC00342-201ENST00000412393 STAP1Q9ULZ2 295 aa5.35□□□□□ -1.55
LINC00342-201ENST00000412393 SCML1Q9UN30 329 aa5.35□□□□□ -1.55
LINC00342-201ENST00000412393 NCKAP1Q9Y2A7 1128 aa5.35□□□□□ -1.55
LINC00342-201ENST00000412393 PTPRBP23467 1997 aa5.35□□□□□ -1.55
LINC00342-201ENST00000412393 FAM47DPA6NHR8 397 aa5.34□□□□□ -1.55
LINC00342-201ENST00000412393 LRRC53A6NM62 1247 aa5.34□□□□□ -1.55
LINC00342-201ENST00000412393 PGRMC1O00264 195 aaKnown RBP5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms