RNA–Protein interactions for RNA: ENST00000411423.1

SF3A1-202, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 4

Gene SF3A1, Length 548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-202ENST00000411423 GLT6D1Q7Z4J2 308 aa18.83■□□□□ 0.6
SF3A1-202ENST00000411423 UBL4BQ8N7F7 174 aa18.83■□□□□ 0.6
SF3A1-202ENST00000411423 WDR36Q8NI36 951 aaKnown RBP18.83■□□□□ 0.6
SF3A1-202ENST00000411423 VPS35Q96QK1 796 aa18.83■□□□□ 0.6
SF3A1-202ENST00000411423 SRPK1Q96SB4 655 aaKnown RBP18.83■□□□□ 0.6
SF3A1-202ENST00000411423 TRABDQ9H4I3 376 aa18.83■□□□□ 0.6
SF3A1-202ENST00000411423 RMI1Q9H9A7 625 aa18.83■□□□□ 0.6
SF3A1-202ENST00000411423 UGT1A7Q9HAW7 530 aa18.83■□□□□ 0.6
SF3A1-202ENST00000411423 UGT1A10Q9HAW8 530 aa18.83■□□□□ 0.6
SF3A1-202ENST00000411423 UGT1A8Q9HAW9 530 aa18.83■□□□□ 0.6
SF3A1-202ENST00000411423 RAD18Q9NS91 495 aa18.83■□□□□ 0.6
SF3A1-202ENST00000411423 TMEM9Q9P0T7 183 aa18.83■□□□□ 0.6
SF3A1-202ENST00000411423 SCHIP1Q9P0W5 487 aaPredicted RBP18.83■□□□□ 0.6
SF3A1-202ENST00000411423 GUCA1BQ9UMX6 200 aa18.83■□□□□ 0.6
SF3A1-202ENST00000411423 PRR19A6NJB7 356 aa18.82■□□□□ 0.6
SF3A1-202ENST00000411423 TNFSF15O95150 251 aa18.82■□□□□ 0.6
SF3A1-202ENST00000411423 METTL18O95568 372 aa18.82■□□□□ 0.6
SF3A1-202ENST00000411423 ETV5P41161 510 aa18.82■□□□□ 0.6
SF3A1-202ENST00000411423 ITPRIPL1Q6GPH6 555 aa18.82■□□□□ 0.6
SF3A1-202ENST00000411423 IYDQ6PHW0 289 aa18.82■□□□□ 0.6
SF3A1-202ENST00000411423 FAM151BQ6UXP7 276 aa18.82■□□□□ 0.6
SF3A1-202ENST00000411423 C11orf96Q7Z7L8 435 aa18.82■□□□□ 0.6
SF3A1-202ENST00000411423 PHYKPLQ8IUZ5 450 aa18.82■□□□□ 0.6
SF3A1-202ENST00000411423 SPACA3Q8IXA5 215 aa18.82■□□□□ 0.6
SF3A1-202ENST00000411423 RNF10Q8N5U6 811 aaKnown RBP18.82■□□□□ 0.6
SF3A1-202ENST00000411423 FAM71DQ8N9W8 422 aa18.82■□□□□ 0.6
SF3A1-202ENST00000411423 SLC35B2Q8TB61 432 aa18.82■□□□□ 0.6
SF3A1-202ENST00000411423 ATG4AQ8WYN0 398 aa18.82■□□□□ 0.6
SF3A1-202ENST00000411423 FSD1LQ9BXM9 530 aa18.82■□□□□ 0.6
SF3A1-202ENST00000411423 PRDM8Q9NQV8 689 aa18.82■□□□□ 0.6
SF3A1-202ENST00000411423 UNC13CQ8NB66 2214 aa18.82■□□□□ 0.6
SF3A1-202ENST00000411423 IGHV1OR21-1A0A087WYE8 117 aa18.81■□□□□ 0.6
SF3A1-202ENST00000411423 C5orf60A6NFR6 353 aa18.81■□□□□ 0.6
SF3A1-202ENST00000411423 SNX2O60749 519 aa18.81■□□□□ 0.6
SF3A1-202ENST00000411423 ANXA9O76027 345 aa18.81■□□□□ 0.6
SF3A1-202ENST00000411423 ITIH1P19827 911 aa18.81■□□□□ 0.6
SF3A1-202ENST00000411423 SPAM1P38567 509 aa18.81■□□□□ 0.6
SF3A1-202ENST00000411423 CETN2P41208 172 aa18.81■□□□□ 0.6
SF3A1-202ENST00000411423 ABCG1P45844 678 aa18.81■□□□□ 0.6
SF3A1-202ENST00000411423 FASLGP48023 281 aa18.81■□□□□ 0.6
SF3A1-202ENST00000411423 GSDMDP57764 484 aa18.81■□□□□ 0.6
SF3A1-202ENST00000411423 ERVPABLB-1P60509 514 aa18.81■□□□□ 0.6
SF3A1-202ENST00000411423 C16orf72Q14CZ0 275 aa18.81■□□□□ 0.6
SF3A1-202ENST00000411423 KCTD11Q693B1 232 aa18.81■□□□□ 0.6
SF3A1-202ENST00000411423 RAB11FIP2Q7L804 512 aa18.81■□□□□ 0.6
SF3A1-202ENST00000411423 PDZD3Q86UT5 571 aa18.81■□□□□ 0.6
SF3A1-202ENST00000411423 LSMEM2Q8N112 164 aa18.81■□□□□ 0.6
SF3A1-202ENST00000411423 NAT14Q8WUY8 206 aa18.81■□□□□ 0.6
SF3A1-202ENST00000411423 CCDC97Q96F63 343 aaPredicted RBP18.81■□□□□ 0.6
SF3A1-202ENST00000411423 KLC4Q9NSK0 619 aa18.81■□□□□ 0.6
SF3A1-202ENST00000411423 HACD3Q9P035 362 aa18.81■□□□□ 0.6
SF3A1-202ENST00000411423 ZFYVE26Q68DK2 2539 aa18.81■□□□□ 0.6
SF3A1-202ENST00000411423 ZNF106Q9H2Y7 1883 aaKnown RBP18.81■□□□□ 0.6
SF3A1-202ENST00000411423 PLD2O14939 933 aa18.8■□□□□ 0.6
SF3A1-202ENST00000411423 GPR3P46089 330 aa18.8■□□□□ 0.6
SF3A1-202ENST00000411423 PCBP4P57723 403 aaKnown RBP18.8■□□□□ 0.6
SF3A1-202ENST00000411423 CCZ1BP86790 482 aa18.8■□□□□ 0.6
SF3A1-202ENST00000411423 CCZ1P86791 482 aaPredicted RBP18.8■□□□□ 0.6
SF3A1-202ENST00000411423 TLE3Q04726 772 aa18.8■□□□□ 0.6
SF3A1-202ENST00000411423 MAP9Q49MG5 647 aa18.8■□□□□ 0.6
SF3A1-202ENST00000411423 CLEC14AQ86T13 490 aa18.8■□□□□ 0.6
SF3A1-202ENST00000411423 TXLNBQ8N3L3 684 aa18.8■□□□□ 0.6
SF3A1-202ENST00000411423 FBXO39Q8N4B4 442 aa18.8■□□□□ 0.6
SF3A1-202ENST00000411423 RCBTB1Q8NDN9 531 aa18.8■□□□□ 0.6
SF3A1-202ENST00000411423 TMEM74Q96NL1 305 aa18.8■□□□□ 0.6
SF3A1-202ENST00000411423 TMEM121Q9BTD3 319 aa18.8■□□□□ 0.6
SF3A1-202ENST00000411423 DNAJC16Q9Y2G8 782 aa18.8■□□□□ 0.6
SF3A1-202ENST00000411423 LOXL2Q9Y4K0 774 aa18.8■□□□□ 0.6
SF3A1-202ENST00000411423 PRAMEF33A0A0G2JMD5 474 aa18.79■□□□□ 0.6
SF3A1-202ENST00000411423 IGHV5-10-1A0A0J9YXX1 117 aa18.79■□□□□ 0.6
SF3A1-202ENST00000411423 GLYATL1P3A0A0U1RQE8 302 aa18.79■□□□□ 0.6
SF3A1-202ENST00000411423 ARHGAP6O43182 974 aa18.79■□□□□ 0.6
SF3A1-202ENST00000411423 CDK14O94921 469 aa18.79■□□□□ 0.6
SF3A1-202ENST00000411423 CPNE6O95741 557 aa18.79■□□□□ 0.6
SF3A1-202ENST00000411423 F3P13726 295 aa18.79■□□□□ 0.6
SF3A1-202ENST00000411423 BRAFP15056 766 aa18.79■□□□□ 0.6
SF3A1-202ENST00000411423 ZNF7P17097 686 aaPredicted RBP18.79■□□□□ 0.6
SF3A1-202ENST00000411423 MPSTP25325 297 aa18.79■□□□□ 0.6
SF3A1-202ENST00000411423 RBMS1P29558 406 aaKnown RBP18.79■□□□□ 0.6
SF3A1-202ENST00000411423 CLCNKAP51800 687 aa18.79■□□□□ 0.6
SF3A1-202ENST00000411423 CTSCP53634 463 aa18.79■□□□□ 0.6
SF3A1-202ENST00000411423 TMEM115Q12893 351 aaPredicted RBP18.79■□□□□ 0.6
SF3A1-202ENST00000411423 LRRTM4Q86VH4 590 aa18.79■□□□□ 0.6
SF3A1-202ENST00000411423 TAB3Q8N5C8 712 aaPredicted RBP18.79■□□□□ 0.6
SF3A1-202ENST00000411423 RASGEF1AQ8N9B8 481 aa18.79■□□□□ 0.6
SF3A1-202ENST00000411423 TTC13Q8NBP0 860 aa18.79■□□□□ 0.6
SF3A1-202ENST00000411423 ZNF248Q8NDW4 579 aa18.79■□□□□ 0.6
SF3A1-202ENST00000411423 OR4K2Q8NGD2 314 aa18.79■□□□□ 0.6
SF3A1-202ENST00000411423 OR13C4Q8NGS5 318 aa18.79■□□□□ 0.6
SF3A1-202ENST00000411423 DTX3LQ8TDB6 740 aa18.79■□□□□ 0.6
SF3A1-202ENST00000411423 TBL1YQ9BQ87 522 aa18.79■□□□□ 0.6
SF3A1-202ENST00000411423 THSD1Q9NS62 852 aa18.79■□□□□ 0.6
SF3A1-202ENST00000411423 FKBPLQ9UIM3 349 aa18.79■□□□□ 0.6
SF3A1-202ENST00000411423 AAR2Q9Y312 384 aaKnown RBP18.79■□□□□ 0.6
SF3A1-202ENST00000411423 GPR89AB7ZAQ6 455 aa18.78■□□□□ 0.6
SF3A1-202ENST00000411423 CCL22O00626 93 aa18.78■□□□□ 0.6
SF3A1-202ENST00000411423 RRP8O43159 456 aaKnown RBP18.78■□□□□ 0.6
SF3A1-202ENST00000411423 VEGFDO43915 354 aa18.78■□□□□ 0.6
SF3A1-202ENST00000411423 ITGA2BP08514 1039 aa18.78■□□□□ 0.6
SF3A1-202ENST00000411423 GPR89BP0CG08 455 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 153.7 ms