RNA–Protein interactions for RNA: ENST00000411220.1

RNU4-88P-201, Transcript of RNA, U4 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU4-88P, Length 86 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-88P-201ENST00000411220 KLHL8Q9P2G9 620 aaPredicted RBP-1.59□□□□□ -2.66
RNU4-88P-201ENST00000411220 ZNF624Q9P2J8 865 aaPredicted RBP-1.59□□□□□ -2.66
RNU4-88P-201ENST00000411220 WDR35Q9P2L0 1181 aa-1.59□□□□□ -2.66
RNU4-88P-201ENST00000411220 AJAP1Q9UKB5 411 aaPredicted RBP-1.59□□□□□ -2.66
RNU4-88P-201ENST00000411220 CDH9Q9ULB4 789 aa-1.59□□□□□ -2.66
RNU4-88P-201ENST00000411220 SAMD4AQ9UPU9 718 aaKnown RBP-1.59□□□□□ -2.66
RNU4-88P-201ENST00000411220 NAALAD2Q9Y3Q0 740 aa-1.59□□□□□ -2.66
RNU4-88P-201ENST00000411220 TSSC4Q9Y5U2 329 aaPredicted RBP-1.59□□□□□ -2.66
RNU4-88P-201ENST00000411220 DMDP11532 3685 aa-1.59□□□□□ -2.66
RNU4-88P-201ENST00000411220 PTPRTO14522 1441 aa-1.59□□□□□ -2.66
RNU4-88P-201ENST00000411220 YLPM1P49750 1951 aaKnown RBP-1.59□□□□□ -2.66
RNU4-88P-201ENST00000411220 ADAMTSL1Q8N6G6 1762 aa-1.59□□□□□ -2.66
RNU4-88P-201ENST00000411220 HEG1Q9ULI3 1381 aa-1.59□□□□□ -2.66
RNU4-88P-201ENST00000411220 MED12LQ86YW9 2145 aa-1.6□□□□□ -2.66
RNU4-88P-201ENST00000411220 CEP290O15078 2479 aa-1.6□□□□□ -2.67
RNU4-88P-201ENST00000411220 UTYO14607 1347 aa-1.6□□□□□ -2.67
RNU4-88P-201ENST00000411220 MYPNQ86TC9 1320 aa-1.6□□□□□ -2.67
RNU4-88P-201ENST00000411220 PLA2R1Q13018 1463 aa-1.6□□□□□ -2.67
RNU4-88P-201ENST00000411220 CITO14578 2027 aa-1.6□□□□□ -2.67
RNU4-88P-201ENST00000411220 IGLV3-22A0A075B6J6 115 aa-1.6□□□□□ -2.67
RNU4-88P-201ENST00000411220 TEX13CA0A0J9YWL9 993 aa-1.6□□□□□ -2.67
RNU4-88P-201ENST00000411220 hCG_38984A0A1B0GV85 526 aa-1.6□□□□□ -2.67
RNU4-88P-201ENST00000411220 LCHNA4D1U4 455 aa-1.6□□□□□ -2.67
RNU4-88P-201ENST00000411220 TRIM49BA6NDI0 452 aa-1.6□□□□□ -2.67
RNU4-88P-201ENST00000411220 C3orf70A6NLC5 250 aaPredicted RBP-1.6□□□□□ -2.67
RNU4-88P-201ENST00000411220 ZNF850A8MQ14 1090 aa-1.6□□□□□ -2.67
RNU4-88P-201ENST00000411220 A8MV72 311 aaPredicted RBP-1.6□□□□□ -2.67
RNU4-88P-201ENST00000411220 SMIM1B2RUZ4 78 aa-1.6□□□□□ -2.67
RNU4-88P-201ENST00000411220 C2CD4DB7Z1M9 353 aa-1.6□□□□□ -2.67
RNU4-88P-201ENST00000411220 DVL2O14641 736 aa-1.6□□□□□ -2.67
RNU4-88P-201ENST00000411220 ZNF197O14709 1029 aa-1.6□□□□□ -2.67
RNU4-88P-201ENST00000411220 CAPN9O14815 690 aa-1.6□□□□□ -2.67
RNU4-88P-201ENST00000411220 SOCS1O15524 211 aa-1.6□□□□□ -2.67
RNU4-88P-201ENST00000411220 ZNF207O43670 478 aaKnown RBP-1.6□□□□□ -2.67
RNU4-88P-201ENST00000411220 TMEM127O75204 238 aa-1.6□□□□□ -2.67
RNU4-88P-201ENST00000411220 PRPF6O94906 941 aaKnown RBP-1.6□□□□□ -2.67
RNU4-88P-201ENST00000411220 RAB36O95755 333 aa-1.6□□□□□ -2.67
RNU4-88P-201ENST00000411220 CFDP00746 253 aaPredicted RBP-1.6□□□□□ -2.67
RNU4-88P-201ENST00000411220 ICAM1P05362 532 aa-1.6□□□□□ -2.67
RNU4-88P-201ENST00000411220 MRPL3P09001 348 aaKnown RBP-1.6□□□□□ -2.67
RNU4-88P-201ENST00000411220 ALPIP09923 528 aa-1.6□□□□□ -2.67
RNU4-88P-201ENST00000411220 MYBP10242 640 aa-1.6□□□□□ -2.67
RNU4-88P-201ENST00000411220 SLC5A1P13866 664 aa-1.6□□□□□ -2.67
RNU4-88P-201ENST00000411220 HOXB8P17481 243 aaPredicted RBP-1.6□□□□□ -2.67
RNU4-88P-201ENST00000411220 TFEBP19484 476 aa-1.6□□□□□ -2.67
RNU4-88P-201ENST00000411220 UGT1A4P22310 534 aa-1.6□□□□□ -2.67
RNU4-88P-201ENST00000411220 IL12BP29460 328 aa-1.6□□□□□ -2.67
RNU4-88P-201ENST00000411220 RBMS1P29558 406 aaKnown RBP-1.6□□□□□ -2.67
RNU4-88P-201ENST00000411220 CALCRP30988 508 aa-1.6□□□□□ -2.67
RNU4-88P-201ENST00000411220 FMO4P31512 558 aa-1.6□□□□□ -2.67
RNU4-88P-201ENST00000411220 SFTPDP35247 375 aa-1.6□□□□□ -2.67
RNU4-88P-201ENST00000411220 HALP42357 657 aa-1.6□□□□□ -2.67
RNU4-88P-201ENST00000411220 GPR15P49685 360 aa-1.6□□□□□ -2.67
RNU4-88P-201ENST00000411220 TAS2R38P59533 333 aa-1.6□□□□□ -2.67
RNU4-88P-201ENST00000411220 ERVK-16P61578 105 aa-1.6□□□□□ -2.67
RNU4-88P-201ENST00000411220 FLI1Q01543 452 aaPredicted RBP-1.6□□□□□ -2.67
RNU4-88P-201ENST00000411220 FOXM1Q08050 763 aa-1.6□□□□□ -2.67
RNU4-88P-201ENST00000411220 ZNF146Q15072 292 aa-1.6□□□□□ -2.67
RNU4-88P-201ENST00000411220 MPPED2Q15777 294 aa-1.6□□□□□ -2.67
RNU4-88P-201ENST00000411220 PCK2Q16822 640 aa-1.6□□□□□ -2.67
RNU4-88P-201ENST00000411220 TIGITQ495A1 244 aa-1.6□□□□□ -2.67
RNU4-88P-201ENST00000411220 HSP90AB3PQ58FF7 597 aa-1.6□□□□□ -2.67
RNU4-88P-201ENST00000411220 FAM47CQ5HY64 1035 aa-1.6□□□□□ -2.67
RNU4-88P-201ENST00000411220 WDR25Q64LD2 544 aaPredicted RBP-1.6□□□□□ -2.67
RNU4-88P-201ENST00000411220 PRR5LQ6MZQ0 368 aa-1.6□□□□□ -2.67
RNU4-88P-201ENST00000411220 TIGD7Q6NT04 549 aaPredicted RBP-1.6□□□□□ -2.67
RNU4-88P-201ENST00000411220 CEMP1Q6PRD7 247 aaPredicted RBP-1.6□□□□□ -2.67
RNU4-88P-201ENST00000411220 REG3GQ6UW15 175 aa-1.6□□□□□ -2.67
RNU4-88P-201ENST00000411220 SLC24A5Q71RS6 500 aa-1.6□□□□□ -2.67
RNU4-88P-201ENST00000411220 FASTKD5Q7L8L6 764 aaKnown RBP-1.6□□□□□ -2.67
RNU4-88P-201ENST00000411220 IGFN1Q86VF2 1251 aa-1.6□□□□□ -2.67
RNU4-88P-201ENST00000411220 NME9Q86XW9 330 aa-1.6□□□□□ -2.67
RNU4-88P-201ENST00000411220 KRTAP8-1Q8IUC2 63 aa-1.6□□□□□ -2.67
RNU4-88P-201ENST00000411220 RDH10Q8IZV5 341 aa-1.6□□□□□ -2.67
RNU4-88P-201ENST00000411220 LINC01465Q8N7H1 131 aa-1.6□□□□□ -2.67
RNU4-88P-201ENST00000411220 CNNM3Q8NE01 707 aa-1.6□□□□□ -2.67
RNU4-88P-201ENST00000411220 SLC24A4Q8NFF2 622 aa-1.6□□□□□ -2.67
RNU4-88P-201ENST00000411220 HDAC7Q8WUI4 952 aa-1.6□□□□□ -2.67
RNU4-88P-201ENST00000411220 POF1BQ8WVV4 589 aa-1.6□□□□□ -2.67
RNU4-88P-201ENST00000411220 N4BP2L2Q92802 583 aaPredicted RBP-1.6□□□□□ -2.67
RNU4-88P-201ENST00000411220 PIK3IP1Q96FE7 263 aa-1.6□□□□□ -2.67
RNU4-88P-201ENST00000411220 PPP1R16AQ96I34 528 aa-1.6□□□□□ -2.67
RNU4-88P-201ENST00000411220 IMMP1LQ96LU5 166 aa-1.6□□□□□ -2.67
RNU4-88P-201ENST00000411220 Q96NJ1 140 aa-1.6□□□□□ -2.67
RNU4-88P-201ENST00000411220 FERD3LQ96RJ6 166 aa-1.6□□□□□ -2.67
RNU4-88P-201ENST00000411220 DDOQ99489 341 aa-1.6□□□□□ -2.67
RNU4-88P-201ENST00000411220 KCTD14Q9BQ13 255 aaPredicted RBP-1.6□□□□□ -2.67
RNU4-88P-201ENST00000411220 EPN3Q9H201 632 aa-1.6□□□□□ -2.67
RNU4-88P-201ENST00000411220 LHX5Q9H2C1 402 aa-1.6□□□□□ -2.67
RNU4-88P-201ENST00000411220 UBN1Q9NPG3 1134 aa-1.6□□□□□ -2.67
RNU4-88P-201ENST00000411220 ABCF3Q9NUQ8 709 aa-1.6□□□□□ -2.67
RNU4-88P-201ENST00000411220 FAM118AQ9NWS6 357 aa-1.6□□□□□ -2.67
RNU4-88P-201ENST00000411220 MIOSQ9NXC5 875 aa-1.6□□□□□ -2.67
RNU4-88P-201ENST00000411220 TBC1D14Q9P2M4 693 aa-1.6□□□□□ -2.67
RNU4-88P-201ENST00000411220 DKK4Q9UBT3 224 aa-1.6□□□□□ -2.67
RNU4-88P-201ENST00000411220 OPN4Q9UHM6 478 aa-1.6□□□□□ -2.67
RNU4-88P-201ENST00000411220 R3HCC1Q9Y3T6 440 aaKnown RBP-1.6□□□□□ -2.67
RNU4-88P-201ENST00000411220 AK5Q9Y6K8 562 aa-1.6□□□□□ -2.67
RNU4-88P-201ENST00000411220 SLCO1B1Q9Y6L6 691 aa-1.6□□□□□ -2.67
RNU4-88P-201ENST00000411220 RGS12O14924 1447 aa-1.6□□□□□ -2.67
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms