RNA–Protein interactions for RNA: ENST00000411146.1

RNU2-55P-201, Transcript of RNA, U2 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU2-55P, Length 174 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-55P-201ENST00000411146 OR14L1PQ8NHC6 308 aa1.3□□□□□ -2.2
RNU2-55P-201ENST00000411146 TRAPPC12Q8WVT3 735 aa1.3□□□□□ -2.2
RNU2-55P-201ENST00000411146 PHF21AQ96BD5 680 aa1.3□□□□□ -2.2
RNU2-55P-201ENST00000411146 PRMT6Q96LA8 375 aaPredicted RBP1.3□□□□□ -2.2
RNU2-55P-201ENST00000411146 ACOX2Q99424 681 aa1.3□□□□□ -2.2
RNU2-55P-201ENST00000411146 EIF2AK1Q9BQI3 630 aaKnown RBP1.3□□□□□ -2.2
RNU2-55P-201ENST00000411146 PAGR1Q9BTK6 254 aa1.3□□□□□ -2.2
RNU2-55P-201ENST00000411146 NOD2Q9HC29 1040 aa1.3□□□□□ -2.2
RNU2-55P-201ENST00000411146 GEMIN8Q9NWZ8 242 aaKnown RBP1.3□□□□□ -2.2
RNU2-55P-201ENST00000411146 A4GNTQ9UNA3 340 aa1.3□□□□□ -2.2
RNU2-55P-201ENST00000411146 ERVK-11Q9UQG0 969 aa1.3□□□□□ -2.2
RNU2-55P-201ENST00000411146 SCINQ9Y6U3 715 aa1.3□□□□□ -2.2
RNU2-55P-201ENST00000411146 A0A0G2JLW4 131 aa1.29□□□□□ -2.2
RNU2-55P-201ENST00000411146 A0A0G2JNG1 304 aa1.29□□□□□ -2.2
RNU2-55P-201ENST00000411146 TEX13CA0A0J9YWL9 993 aa1.29□□□□□ -2.2
RNU2-55P-201ENST00000411146 FAM237AA0A1B0GTK4 181 aa1.29□□□□□ -2.2
RNU2-55P-201ENST00000411146 SRRM5B3KS81 715 aa1.29□□□□□ -2.2
RNU2-55P-201ENST00000411146 TAF4O00268 1085 aa1.29□□□□□ -2.2
RNU2-55P-201ENST00000411146 RTL8CO15255 209 aa1.29□□□□□ -2.2
RNU2-55P-201ENST00000411146 DCXO43602 365 aa1.29□□□□□ -2.2
RNU2-55P-201ENST00000411146 TRMUO75648 421 aaKnown RBP1.29□□□□□ -2.2
RNU2-55P-201ENST00000411146 GCNT3O95395 438 aa1.29□□□□□ -2.2
RNU2-55P-201ENST00000411146 LIPFP07098 398 aa1.29□□□□□ -2.2
RNU2-55P-201ENST00000411146 GNAZP19086 355 aa1.29□□□□□ -2.2
RNU2-55P-201ENST00000411146 ANXA7P20073 488 aaKnown RBP1.29□□□□□ -2.2
RNU2-55P-201ENST00000411146 EPHA2P29317 976 aa1.29□□□□□ -2.2
RNU2-55P-201ENST00000411146 HOXA13P31271 388 aaPredicted RBP1.29□□□□□ -2.2
RNU2-55P-201ENST00000411146 TLX1P31314 330 aaPredicted RBP1.29□□□□□ -2.2
RNU2-55P-201ENST00000411146 SLC6A12P48065 614 aa1.29□□□□□ -2.2
RNU2-55P-201ENST00000411146 RAD23BP54727 409 aa1.29□□□□□ -2.2
RNU2-55P-201ENST00000411146 SNX16P57768 344 aa1.29□□□□□ -2.2
RNU2-55P-201ENST00000411146 CD81P60033 236 aa1.29□□□□□ -2.2
RNU2-55P-201ENST00000411146 PPARDQ03181 441 aa1.29□□□□□ -2.2
RNU2-55P-201ENST00000411146 GRIK2Q13002 908 aa1.29□□□□□ -2.2
RNU2-55P-201ENST00000411146 KIR2DS5Q14953 304 aa1.29□□□□□ -2.2
RNU2-55P-201ENST00000411146 ANKRD1Q15327 319 aa1.29□□□□□ -2.2
RNU2-55P-201ENST00000411146 CYP4A22Q5TCH4 519 aa1.29□□□□□ -2.2
RNU2-55P-201ENST00000411146 ANO1Q5XXA6 986 aa1.29□□□□□ -2.2
RNU2-55P-201ENST00000411146 NSUN5P2Q63ZY6 315 aa1.29□□□□□ -2.2
RNU2-55P-201ENST00000411146 ATG16L1Q676U5 607 aa1.29□□□□□ -2.2
RNU2-55P-201ENST00000411146 LCN10Q6JVE6 187 aa1.29□□□□□ -2.2
RNU2-55P-201ENST00000411146 Q6ZSR9 355 aa1.29□□□□□ -2.2
RNU2-55P-201ENST00000411146 GPR180Q86V85 440 aa1.29□□□□□ -2.2
RNU2-55P-201ENST00000411146 MYLK4Q86YV6 388 aaPredicted RBP1.29□□□□□ -2.2
RNU2-55P-201ENST00000411146 C11orf65Q8NCR3 313 aa1.29□□□□□ -2.2
RNU2-55P-201ENST00000411146 FGFBP3Q8TAT2 258 aa1.29□□□□□ -2.2
RNU2-55P-201ENST00000411146 SEMA4DQ92854 862 aa1.29□□□□□ -2.2
RNU2-55P-201ENST00000411146 FOXN4Q96NZ1 517 aa1.29□□□□□ -2.2
RNU2-55P-201ENST00000411146 SLC28A3Q9HAS3 691 aa1.29□□□□□ -2.2
RNU2-55P-201ENST00000411146 ZBTB20Q9HC78 741 aaPredicted RBP1.29□□□□□ -2.2
RNU2-55P-201ENST00000411146 RASSF1Q9NS23 344 aa1.29□□□□□ -2.2
RNU2-55P-201ENST00000411146 SLC38A7Q9NVC3 462 aa1.29□□□□□ -2.2
RNU2-55P-201ENST00000411146 BEX4Q9NWD9 120 aaPredicted RBP1.29□□□□□ -2.2
RNU2-55P-201ENST00000411146 C2orf42Q9NWW7 574 aa1.29□□□□□ -2.2
RNU2-55P-201ENST00000411146 TAB2Q9NYJ8 693 aa1.29□□□□□ -2.2
RNU2-55P-201ENST00000411146 OGFRQ9NZT2 677 aa1.29□□□□□ -2.2
RNU2-55P-201ENST00000411146 SLC25A10Q9UBX3 287 aaPredicted RBP1.29□□□□□ -2.2
RNU2-55P-201ENST00000411146 EPHA6Q9UF33 1036 aa1.29□□□□□ -2.2
RNU2-55P-201ENST00000411146 CNOT8Q9UFF9 292 aaKnown RBP1.29□□□□□ -2.2
RNU2-55P-201ENST00000411146 KLK13Q9UKR3 277 aa1.29□□□□□ -2.2
RNU2-55P-201ENST00000411146 SUFUQ9UMX1 484 aa1.29□□□□□ -2.2
RNU2-55P-201ENST00000411146 PCDHGB3Q9Y5G1 929 aa1.29□□□□□ -2.2
RNU2-55P-201ENST00000411146 CSAG2Q9Y5P2 127 aa1.29□□□□□ -2.2
RNU2-55P-201ENST00000411146 A0A1W2PQM1 296 aa1.28□□□□□ -2.2
RNU2-55P-201ENST00000411146 MEX3AA1L020 520 aaKnown RBP1.28□□□□□ -2.2
RNU2-55P-201ENST00000411146 M0QZ24 198 aa1.28□□□□□ -2.2
RNU2-55P-201ENST00000411146 ZNF197O14709 1029 aa1.28□□□□□ -2.2
RNU2-55P-201ENST00000411146 PLPP2O43688 288 aa1.28□□□□□ -2.2
RNU2-55P-201ENST00000411146 CLDN1O95832 211 aa1.28□□□□□ -2.2
RNU2-55P-201ENST00000411146 RAF1P04049 648 aa1.28□□□□□ -2.2
RNU2-55P-201ENST00000411146 ZSCAN5DPP0CG00 497 aa1.28□□□□□ -2.2
RNU2-55P-201ENST00000411146 DDX5P17844 614 aaKnown RBP1.28□□□□□ -2.2
RNU2-55P-201ENST00000411146 CBLP22681 906 aa1.28□□□□□ -2.2
RNU2-55P-201ENST00000411146 MCCP23508 829 aa1.28□□□□□ -2.2
RNU2-55P-201ENST00000411146 WNT5AP41221 380 aa1.28□□□□□ -2.2
RNU2-55P-201ENST00000411146 PRKAA1Q13131 559 aa1.28□□□□□ -2.2
RNU2-55P-201ENST00000411146 ACVR2BQ13705 512 aa1.28□□□□□ -2.2
RNU2-55P-201ENST00000411146 CDONQ4KMG0 1287 aa1.28□□□□□ -2.2
RNU2-55P-201ENST00000411146 RAB6CQ53S08 254 aa1.28□□□□□ -2.2
RNU2-55P-201ENST00000411146 CXorf66Q5JRM2 361 aaPredicted RBP1.28□□□□□ -2.2
RNU2-55P-201ENST00000411146 DCST1Q5T197 706 aa1.28□□□□□ -2.2
RNU2-55P-201ENST00000411146 FRG2Q64ET8 278 aa1.28□□□□□ -2.2
RNU2-55P-201ENST00000411146 ZNF704Q6ZNC4 412 aaPredicted RBP1.28□□□□□ -2.2
RNU2-55P-201ENST00000411146 GPRIN3Q6ZVF9 776 aa1.28□□□□□ -2.2
RNU2-55P-201ENST00000411146 BBS12Q6ZW61 710 aa1.28□□□□□ -2.2
RNU2-55P-201ENST00000411146 DPPA4Q7L190 304 aa1.28□□□□□ -2.2
RNU2-55P-201ENST00000411146 SLC16A9Q7RTY1 509 aa1.28□□□□□ -2.2
RNU2-55P-201ENST00000411146 CDC20BQ86Y33 519 aa1.28□□□□□ -2.2
RNU2-55P-201ENST00000411146 Q8N377 158 aa1.28□□□□□ -2.2
RNU2-55P-201ENST00000411146 RASGEF1CQ8N431 466 aa1.28□□□□□ -2.2
RNU2-55P-201ENST00000411146 DCLK2Q8N568 766 aa1.28□□□□□ -2.2
RNU2-55P-201ENST00000411146 ZNF614Q8N883 585 aa1.28□□□□□ -2.2
RNU2-55P-201ENST00000411146 TNIP2Q8NFZ5 429 aa1.28□□□□□ -2.2
RNU2-55P-201ENST00000411146 UTP15Q8TED0 518 aaKnown RBP1.28□□□□□ -2.2
RNU2-55P-201ENST00000411146 RTP3Q9BQQ7 232 aa1.28□□□□□ -2.2
RNU2-55P-201ENST00000411146 RHNO1Q9BSD3 238 aa1.28□□□□□ -2.2
RNU2-55P-201ENST00000411146 MCRIP2Q9BUT9 160 aaKnown RBP1.28□□□□□ -2.2
RNU2-55P-201ENST00000411146 USP44Q9H0E7 712 aa1.28□□□□□ -2.2
RNU2-55P-201ENST00000411146 INTS2Q9H0H0 1204 aaKnown RBP1.28□□□□□ -2.2
RNU2-55P-201ENST00000411146 RAB6CQ9H0N0 254 aa1.28□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms