RNA–Protein interactions for RNA: ENST00000410080.5

PRPF40A-202, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRPF40A, Length 8,048 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-202ENST00000410080 LAMP2P13473 410 aa11.17□□□□□ -0.62
PRPF40A-202ENST00000410080 ATP4AP20648 1035 aa11.17□□□□□ -0.62
PRPF40A-202ENST00000410080 IDSP22304 550 aa11.17□□□□□ -0.62
PRPF40A-202ENST00000410080 CAPGP40121 348 aa11.17□□□□□ -0.62
PRPF40A-202ENST00000410080 CASP6P55212 293 aa11.17□□□□□ -0.62
PRPF40A-202ENST00000410080 NAB1Q13506 487 aa11.17□□□□□ -0.62
PRPF40A-202ENST00000410080 GRM3Q14832 879 aa11.17□□□□□ -0.62
PRPF40A-202ENST00000410080 EIF2S3LQ2VIR3 472 aaKnown RBP11.17□□□□□ -0.62
PRPF40A-202ENST00000410080 ZFP1Q6P2D0 407 aa11.17□□□□□ -0.62
PRPF40A-202ENST00000410080 GALNT18Q6P9A2 607 aa11.17□□□□□ -0.62
PRPF40A-202ENST00000410080 WDR59Q6PJI9 974 aa11.17□□□□□ -0.62
PRPF40A-202ENST00000410080 ABRAXAS1Q6UWZ7 409 aa11.17□□□□□ -0.62
PRPF40A-202ENST00000410080 TBCBQ99426 244 aa11.17□□□□□ -0.62
PRPF40A-202ENST00000410080 B3GNT4Q9C0J1 378 aa11.17□□□□□ -0.62
PRPF40A-202ENST00000410080 ENY2Q9NPA8 101 aa11.17□□□□□ -0.62
PRPF40A-202ENST00000410080 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.17□□□□□ -0.62
PRPF40A-202ENST00000410080 GNEQ9Y223 722 aaKnown RBP11.17□□□□□ -0.62
PRPF40A-202ENST00000410080 FAM172BPA6NC97 362 aa11.16□□□□□ -0.62
PRPF40A-202ENST00000410080 KHNYNO15037 678 aaKnown RBP11.16□□□□□ -0.62
PRPF40A-202ENST00000410080 ZBTB11O95625 1053 aaPredicted RBP11.16□□□□□ -0.62
PRPF40A-202ENST00000410080 PGAM2P15259 253 aa11.16□□□□□ -0.62
PRPF40A-202ENST00000410080 GJA8P48165 433 aa11.16□□□□□ -0.62
PRPF40A-202ENST00000410080 MLIPQ5VWP3 458 aa11.16□□□□□ -0.62
PRPF40A-202ENST00000410080 CATSPERGQ6ZRH7 1159 aa11.16□□□□□ -0.62
PRPF40A-202ENST00000410080 TNS4Q8IZW8 715 aa11.16□□□□□ -0.62
PRPF40A-202ENST00000410080 ARMC5Q96C12 935 aa11.16□□□□□ -0.62
PRPF40A-202ENST00000410080 FAM105AQ9NUU6 356 aa11.16□□□□□ -0.62
PRPF40A-202ENST00000410080 GRIP1Q9Y3R0 1128 aa11.16□□□□□ -0.62
PRPF40A-202ENST00000410080 ARL5CA6NH57 179 aa11.16□□□□□ -0.62
PRPF40A-202ENST00000410080 FKBP6O75344 327 aa11.16□□□□□ -0.62
PRPF40A-202ENST00000410080 PAGE1O75459 146 aa11.16□□□□□ -0.62
PRPF40A-202ENST00000410080 SCGB1D2O95969 90 aa11.16□□□□□ -0.62
PRPF40A-202ENST00000410080 PAEPP09466 180 aa11.16□□□□□ -0.62
PRPF40A-202ENST00000410080 PRKCHP24723 683 aa11.16□□□□□ -0.62
PRPF40A-202ENST00000410080 CSTF2P33240 577 aaKnown RBP eCLIP11.16□□□□□ -0.629e-9■□□□□ 10.2
PRPF40A-202ENST00000410080 CRYBB1P53674 252 aaPredicted RBP11.16□□□□□ -0.62
PRPF40A-202ENST00000410080 GRIK5Q16478 980 aa11.16□□□□□ -0.62
PRPF40A-202ENST00000410080 FIP1L1Q6UN15 594 aaKnown RBP11.16□□□□□ -0.62
PRPF40A-202ENST00000410080 UNC5AQ6ZN44 842 aa11.16□□□□□ -0.62
PRPF40A-202ENST00000410080 SYVN1Q86TM6 617 aa11.16□□□□□ -0.62
PRPF40A-202ENST00000410080 CLIP4Q8N3C7 705 aa11.16□□□□□ -0.62
PRPF40A-202ENST00000410080 GIPC3Q8TF64 312 aa11.16□□□□□ -0.62
PRPF40A-202ENST00000410080 APBB2Q92870 758 aa11.16□□□□□ -0.62
PRPF40A-202ENST00000410080 SLC25A36Q96CQ1 311 aa11.16□□□□□ -0.62
PRPF40A-202ENST00000410080 BORCS8Q96FH0 119 aa11.16□□□□□ -0.62
PRPF40A-202ENST00000410080 DGAT2Q96PD7 388 aa11.16□□□□□ -0.62
PRPF40A-202ENST00000410080 GDAP2Q9NXN4 497 aa11.16□□□□□ -0.62
PRPF40A-202ENST00000410080 RGPD8O14715 1765 aaPredicted RBP11.16□□□□□ -0.62
PRPF40A-202ENST00000410080 TRIM38O00635 465 aa11.16□□□□□ -0.62
PRPF40A-202ENST00000410080 RYKP34925 604 aa11.16□□□□□ -0.62
PRPF40A-202ENST00000410080 DPYSL3Q14195 570 aa11.16□□□□□ -0.62
PRPF40A-202ENST00000410080 KAZALD1Q96I82 304 aa11.16□□□□□ -0.62
PRPF40A-202ENST00000410080 EBPLQ9BY08 206 aa11.16□□□□□ -0.62
PRPF40A-202ENST00000410080 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.16□□□□□ -0.62
PRPF40A-202ENST00000410080 TMEM5Q9Y2B1 443 aa11.16□□□□□ -0.62
PRPF40A-202ENST00000410080 B3GALT2O43825 422 aa11.16□□□□□ -0.62
PRPF40A-202ENST00000410080 EIF1AXP47813 144 aaKnown RBP11.16□□□□□ -0.62
PRPF40A-202ENST00000410080 MTTPP55157 894 aa11.16□□□□□ -0.62
PRPF40A-202ENST00000410080 RAB10P61026 200 aa11.16□□□□□ -0.62
PRPF40A-202ENST00000410080 DDR1Q08345 913 aa11.16□□□□□ -0.62
PRPF40A-202ENST00000410080 TRMT5Q32P41 509 aaKnown RBP11.16□□□□□ -0.62
PRPF40A-202ENST00000410080 GDF6Q6KF10 455 aaPredicted RBP11.16□□□□□ -0.62
PRPF40A-202ENST00000410080 RIOX2Q8IUF8 465 aa11.16□□□□□ -0.62
PRPF40A-202ENST00000410080 UNC5BQ8IZJ1 945 aa11.16□□□□□ -0.62
PRPF40A-202ENST00000410080 OR4C6Q8NH72 309 aa11.16□□□□□ -0.62
PRPF40A-202ENST00000410080 C1orf216Q8TAB5 229 aa11.16□□□□□ -0.62
PRPF40A-202ENST00000410080 CLP1Q92989 425 aaKnown RBP11.16□□□□□ -0.62
PRPF40A-202ENST00000410080 NDC1Q9BTX1 674 aa11.16□□□□□ -0.62
PRPF40A-202ENST00000410080 DNAJC5Q9H3Z4 198 aa11.16□□□□□ -0.62
PRPF40A-202ENST00000410080 TMBIM4Q9HC24 238 aa11.16□□□□□ -0.62
PRPF40A-202ENST00000410080 MORF4L1Q9UBU8 362 aa11.16□□□□□ -0.62
PRPF40A-202ENST00000410080 EGFL7Q9UHF1 273 aa11.16□□□□□ -0.62
PRPF40A-202ENST00000410080 KIAA1210Q9ULL0 1709 aa11.16□□□□□ -0.62
PRPF40A-202ENST00000410080 GZMAP12544 262 aa11.16□□□□□ -0.62
PRPF40A-202ENST00000410080 NR0B1P51843 470 aaKnown RBP11.16□□□□□ -0.62
PRPF40A-202ENST00000410080 SLC29A4Q7RTT9 530 aa11.16□□□□□ -0.62
PRPF40A-202ENST00000410080 ADAMTS13Q76LX8 1427 aa11.16□□□□□ -0.62
PRPF40A-202ENST00000410080 ZSCAN5CA6NGD5 496 aaPredicted RBP11.16□□□□□ -0.62
PRPF40A-202ENST00000410080 LDOC1O95751 146 aaPredicted RBP11.16□□□□□ -0.62
PRPF40A-202ENST00000410080 GJA1P17302 382 aa11.16□□□□□ -0.62
PRPF40A-202ENST00000410080 LAG3P18627 525 aa11.16□□□□□ -0.62
PRPF40A-202ENST00000410080 BLKP51451 505 aa11.16□□□□□ -0.62
PRPF40A-202ENST00000410080 UBAP2Q5T6F2 1119 aaKnown RBP11.16□□□□□ -0.62
PRPF40A-202ENST00000410080 OR10Q1Q8NGQ4 319 aa11.16□□□□□ -0.62
PRPF40A-202ENST00000410080 PSMA8Q8TAA3 256 aa11.16□□□□□ -0.62
PRPF40A-202ENST00000410080 CPT1CQ8TCG5 803 aa11.16□□□□□ -0.62
PRPF40A-202ENST00000410080 SHDQ96IW2 340 aa11.16□□□□□ -0.62
PRPF40A-202ENST00000410080 TEFMQ96QE5 360 aaKnown RBP11.16□□□□□ -0.62
PRPF40A-202ENST00000410080 MRPS30Q9NP92 439 aaKnown RBP11.16□□□□□ -0.62
PRPF40A-202ENST00000410080 MMP3P08254 477 aa11.15□□□□□ -0.62
PRPF40A-202ENST00000410080 MAPK12P53778 367 aa11.15□□□□□ -0.62
PRPF40A-202ENST00000410080 MCL1Q07820 350 aa11.15□□□□□ -0.62
PRPF40A-202ENST00000410080 SNAPC1Q16533 368 aa11.15□□□□□ -0.62
PRPF40A-202ENST00000410080 KCTD21Q4G0X4 260 aa11.15□□□□□ -0.62
PRPF40A-202ENST00000410080 ENPP7Q6UWV6 458 aa11.15□□□□□ -0.62
PRPF40A-202ENST00000410080 FAM198AQ9UFP1 575 aa11.15□□□□□ -0.62
PRPF40A-202ENST00000410080 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.15□□□□□ -0.62
PRPF40A-202ENST00000410080 VWDEQ8N2E2 1590 aa11.15□□□□□ -0.62
PRPF40A-202ENST00000410080 ARHGEF33A8MVX0 844 aa11.15□□□□□ -0.62
PRPF40A-202ENST00000410080 AXIN1O15169 862 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms