RNA–Protein interactions for RNA: ENST00000409766.7

USP39-204, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,033 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-204ENST00000409766 SARS2Q9NP81 518 aaKnown RBP19.94■□□□□ 0.78
USP39-204ENST00000409766 HS3ST2Q9Y278 367 aa19.94■□□□□ 0.78
USP39-204ENST00000409766 ENO3P13929 434 aaPredicted RBP19.93■□□□□ 0.78
USP39-204ENST00000409766 DPP6P42658 865 aa19.93■□□□□ 0.78
USP39-204ENST00000409766 AGTR2P50052 363 aa19.93■□□□□ 0.78
USP39-204ENST00000409766 ATP4BP51164 291 aa19.93■□□□□ 0.78
USP39-204ENST00000409766 NAA20P61599 178 aa19.93■□□□□ 0.78
USP39-204ENST00000409766 SNRPD1P62314 119 aaKnown RBP19.93■□□□□ 0.78
USP39-204ENST00000409766 GEN1Q17RS7 908 aa19.93■□□□□ 0.78
USP39-204ENST00000409766 FUT11Q495W5 492 aa19.93■□□□□ 0.78
USP39-204ENST00000409766 TMEM25Q86YD3 366 aa19.93■□□□□ 0.78
USP39-204ENST00000409766 GPSM1Q86YR5 675 aa19.93■□□□□ 0.78
USP39-204ENST00000409766 PAF1Q8N7H5 531 aa19.93■□□□□ 0.78
USP39-204ENST00000409766 SLC26A7Q8TE54 656 aa19.93■□□□□ 0.78
USP39-204ENST00000409766 ISG20Q96AZ6 181 aaKnown RBP19.93■□□□□ 0.78
USP39-204ENST00000409766 KCNA7Q96RP8 456 aa19.93■□□□□ 0.78
USP39-204ENST00000409766 TUBB1Q9H4B7 451 aa19.93■□□□□ 0.78
USP39-204ENST00000409766 ASB8Q9H765 288 aa19.93■□□□□ 0.78
USP39-204ENST00000409766 FBRSL1Q9HCM7 1045 aaKnown RBP19.93■□□□□ 0.78
USP39-204ENST00000409766 SEMA4BQ9NPR2 832 aaPredicted RBP19.93■□□□□ 0.78
USP39-204ENST00000409766 UTP6Q9NYH9 597 aaKnown RBP19.93■□□□□ 0.78
USP39-204ENST00000409766 APPL1Q9UKG1 709 aa19.93■□□□□ 0.78
USP39-204ENST00000409766 TRBV5-4A0A0C4DH59 114 aa19.93■□□□□ 0.78
USP39-204ENST00000409766 NCF1BA6NI72 391 aaPredicted RBP19.93■□□□□ 0.78
USP39-204ENST00000409766 NCF1CA8MVU1 366 aaPredicted RBP19.93■□□□□ 0.78
USP39-204ENST00000409766 PIP5K1BO14986 540 aa19.93■□□□□ 0.78
USP39-204ENST00000409766 MOSPD3O75425 235 aa19.93■□□□□ 0.78
USP39-204ENST00000409766 ALDOCP09972 364 aaKnown RBP19.93■□□□□ 0.78
USP39-204ENST00000409766 NCF1P14598 390 aaPredicted RBP19.93■□□□□ 0.78
USP39-204ENST00000409766 ACADSP16219 412 aa19.93■□□□□ 0.78
USP39-204ENST00000409766 ZNF7P17097 686 aaPredicted RBP19.93■□□□□ 0.78
USP39-204ENST00000409766 BPIP17213 487 aa19.93■□□□□ 0.78
USP39-204ENST00000409766 RPS3P23396 243 aaKnown RBP eCLIP19.93■□□□□ 0.783e-13■■■■□ 26.3
USP39-204ENST00000409766 THOP1P52888 689 aa19.93■□□□□ 0.78
USP39-204ENST00000409766 STX5Q13190 355 aa19.93■□□□□ 0.78
USP39-204ENST00000409766 MAPRE2Q15555 327 aa19.93■□□□□ 0.78
USP39-204ENST00000409766 ZNF423Q2M1K9 1284 aa19.93■□□□□ 0.78
USP39-204ENST00000409766 AGKQ53H12 422 aa19.93■□□□□ 0.78
USP39-204ENST00000409766 PLPP4Q5VZY2 271 aa19.93■□□□□ 0.78
USP39-204ENST00000409766 ZNF483Q8TF39 744 aaPredicted RBP19.93■□□□□ 0.78
USP39-204ENST00000409766 LYSMD1Q96S90 227 aa19.93■□□□□ 0.78
USP39-204ENST00000409766 MRPL1Q9BYD6 325 aaKnown RBP19.93■□□□□ 0.78
USP39-204ENST00000409766 CLPBQ9H078 707 aa19.93■□□□□ 0.78
USP39-204ENST00000409766 CCDC167Q9P0B6 97 aa19.93■□□□□ 0.78
USP39-204ENST00000409766 PCTPQ9UKL6 214 aa19.93■□□□□ 0.78
USP39-204ENST00000409766 PACSIN3Q9UKS6 424 aa19.93■□□□□ 0.78
USP39-204ENST00000409766 TMCO1Q9UM00 188 aa19.93■□□□□ 0.78
USP39-204ENST00000409766 LZTS1Q9Y250 596 aa19.93■□□□□ 0.78
USP39-204ENST00000409766 BAG2O95816 211 aa19.92■□□□□ 0.78
USP39-204ENST00000409766 MYLK3Q32MK0 819 aa19.92■□□□□ 0.78
USP39-204ENST00000409766 ASTLQ6HA08 431 aaPredicted RBP19.92■□□□□ 0.78
USP39-204ENST00000409766 KBTBD6Q86V97 674 aa19.92■□□□□ 0.78
USP39-204ENST00000409766 PPFIBP2Q8ND30 876 aa19.92■□□□□ 0.78
USP39-204ENST00000409766 BOCQ9BWV1 1114 aa19.92■□□□□ 0.78
USP39-204ENST00000409766 PTGDR2Q9Y5Y4 395 aa19.92■□□□□ 0.78
USP39-204ENST00000409766 LAMA3Q16787 3333 aa19.92■□□□□ 0.78
USP39-204ENST00000409766 GOLGA8CPA6NN73 597 aa19.92■□□□□ 0.78
USP39-204ENST00000409766 RFPL2O75678 378 aa19.92■□□□□ 0.78
USP39-204ENST00000409766 ITGALP20701 1170 aa19.92■□□□□ 0.78
USP39-204ENST00000409766 DDX6P26196 483 aaKnown RBP eCLIP19.92■□□□□ 0.785e-6■■■■■ 34.8
USP39-204ENST00000409766 CEACAM7Q14002 265 aa19.92■□□□□ 0.78
USP39-204ENST00000409766 TEAD2Q15562 447 aa19.92■□□□□ 0.78
USP39-204ENST00000409766 TGFBIQ15582 683 aa19.92■□□□□ 0.78
USP39-204ENST00000409766 C22orf39Q6P5X5 142 aa19.92■□□□□ 0.78
USP39-204ENST00000409766 RNF111Q6ZNA4 994 aa19.92■□□□□ 0.78
USP39-204ENST00000409766 PHYKPLQ8IUZ5 450 aa19.92■□□□□ 0.78
USP39-204ENST00000409766 RBFAQ8N0V3 343 aa19.92■□□□□ 0.78
USP39-204ENST00000409766 CBARPQ8N350 705 aaPredicted RBP19.92■□□□□ 0.78
USP39-204ENST00000409766 SP7Q8TDD2 431 aaPredicted RBP19.92■□□□□ 0.78
USP39-204ENST00000409766 N4BP2L2Q92802 583 aaPredicted RBP19.92■□□□□ 0.78
USP39-204ENST00000409766 ECHDC3Q96DC8 303 aa19.92■□□□□ 0.78
USP39-204ENST00000409766 CIPCQ9C0C6 399 aa19.92■□□□□ 0.78
USP39-204ENST00000409766 GLYATL1P3A0A0U1RQE8 302 aa19.91■□□□□ 0.78
USP39-204ENST00000409766 NPIPB15A6NHN6 443 aaPredicted RBP19.91■□□□□ 0.78
USP39-204ENST00000409766 FBP2O00757 339 aa19.91■□□□□ 0.78
USP39-204ENST00000409766 CFLARO15519 480 aa19.91■□□□□ 0.78
USP39-204ENST00000409766 ACRV1P26436 265 aa19.91■□□□□ 0.78
USP39-204ENST00000409766 BMPR1AP36894 532 aa19.91■□□□□ 0.78
USP39-204ENST00000409766 ACADVLP49748 655 aa19.91■□□□□ 0.78
USP39-204ENST00000409766 PTRHD1Q6GMV3 140 aaKnown RBP19.91■□□□□ 0.78
USP39-204ENST00000409766 TSPAN33Q86UF1 283 aa19.91■□□□□ 0.78
USP39-204ENST00000409766 HIPK4Q8NE63 616 aa19.91■□□□□ 0.78
USP39-204ENST00000409766 TUBGCP5Q96RT8 1024 aa19.91■□□□□ 0.78
USP39-204ENST00000409766 RAD9AQ99638 391 aa19.91■□□□□ 0.78
USP39-204ENST00000409766 CD274Q9NZQ7 290 aa19.91■□□□□ 0.78
USP39-204ENST00000409766 NOTCH4Q99466 2003 aa19.9■□□□□ 0.78
USP39-204ENST00000409766 VGLL3A8MV65 326 aa19.9■□□□□ 0.78
USP39-204ENST00000409766 A8MX80 341 aa19.9■□□□□ 0.78
USP39-204ENST00000409766 GRM6O15303 877 aa19.9■□□□□ 0.78
USP39-204ENST00000409766 MAP3K7O43318 606 aa19.9■□□□□ 0.78
USP39-204ENST00000409766 SNX2O60749 519 aa19.9■□□□□ 0.78
USP39-204ENST00000409766 FGF19O95750 216 aa19.9■□□□□ 0.78
USP39-204ENST00000409766 MLYCDO95822 493 aa19.9■□□□□ 0.78
USP39-204ENST00000409766 SNRPB2P08579 225 aaKnown RBP19.9■□□□□ 0.78
USP39-204ENST00000409766 UGT1A6P19224 532 aa19.9■□□□□ 0.78
USP39-204ENST00000409766 UGT1A1P22309 533 aa19.9■□□□□ 0.78
USP39-204ENST00000409766 UGT1A4P22310 534 aa19.9■□□□□ 0.78
USP39-204ENST00000409766 UGT1A3P35503 534 aa19.9■□□□□ 0.78
USP39-204ENST00000409766 UGT1A5P35504 534 aa19.9■□□□□ 0.78
USP39-204ENST00000409766 PKNOX1P55347 436 aa19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms