RNA–Protein interactions for RNA: ENST00000409531.5

TSPAN4-208, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,339 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-208ENST00000409531 KLF6Q99612 283 aaPredicted RBP16.38■□□□□ 0.21
TSPAN4-208ENST00000409531 GAREM1Q9H706 876 aa16.38■□□□□ 0.21
TSPAN4-208ENST00000409531 PLAC1Q9HBJ0 212 aa16.38■□□□□ 0.21
TSPAN4-208ENST00000409531 ZFATQ9P243 1243 aa16.38■□□□□ 0.21
TSPAN4-208ENST00000409531 VPS9D1Q9Y2B5 631 aa16.38■□□□□ 0.21
TSPAN4-208ENST00000409531 SNX11Q9Y5W9 270 aa16.38■□□□□ 0.21
TSPAN4-208ENST00000409531 NCOR2Q9Y618 2525 aa16.37■□□□□ 0.21
TSPAN4-208ENST00000409531 PCDH15Q96QU1 1955 aa16.37■□□□□ 0.21
TSPAN4-208ENST00000409531 TRBV5-4A0A0C4DH59 114 aa16.37■□□□□ 0.21
TSPAN4-208ENST00000409531 OR51F1A6NGY5 319 aa16.37■□□□□ 0.21
TSPAN4-208ENST00000409531 RAD51BO15315 384 aa16.37■□□□□ 0.21
TSPAN4-208ENST00000409531 CER1O95813 267 aa16.37■□□□□ 0.21
TSPAN4-208ENST00000409531 WNT1P04628 370 aa16.37■□□□□ 0.21
TSPAN4-208ENST00000409531 ERVK-10P10266 1014 aa16.37■□□□□ 0.21
TSPAN4-208ENST00000409531 OGNP20774 298 aaKnown RBP16.37■□□□□ 0.21
TSPAN4-208ENST00000409531 PMLP29590 882 aa16.37■□□□□ 0.21
TSPAN4-208ENST00000409531 IGFALSP35858 605 aa16.37■□□□□ 0.21
TSPAN4-208ENST00000409531 TRIM23P36406 574 aa16.37■□□□□ 0.21
TSPAN4-208ENST00000409531 TTPAP49638 278 aa16.37■□□□□ 0.21
TSPAN4-208ENST00000409531 C21orf59P57076 290 aa16.37■□□□□ 0.21
TSPAN4-208ENST00000409531 NAB1Q13506 487 aa16.37■□□□□ 0.21
TSPAN4-208ENST00000409531 INPP5AQ14642 412 aa16.37■□□□□ 0.21
TSPAN4-208ENST00000409531 ATP13A5Q4VNC0 1218 aa16.37■□□□□ 0.21
TSPAN4-208ENST00000409531 HSP90AA5PQ58FG0 334 aa16.37■□□□□ 0.21
TSPAN4-208ENST00000409531 RNF187Q5TA31 235 aaPredicted RBP16.37■□□□□ 0.21
TSPAN4-208ENST00000409531 ZNF470Q6ECI4 717 aa16.37■□□□□ 0.21
TSPAN4-208ENST00000409531 LAYNQ6UX15 382 aa16.37■□□□□ 0.21
TSPAN4-208ENST00000409531 KIAA0408Q6ZU52 694 aa16.37■□□□□ 0.21
TSPAN4-208ENST00000409531 TAS2R42Q7RTR8 314 aa16.37■□□□□ 0.21
TSPAN4-208ENST00000409531 PHYKPLQ8IUZ5 450 aa16.37■□□□□ 0.21
TSPAN4-208ENST00000409531 CNTN4Q8IWV2 1026 aa16.37■□□□□ 0.21
TSPAN4-208ENST00000409531 TMEM145Q8NBT3 493 aa16.37■□□□□ 0.21
TSPAN4-208ENST00000409531 FBF1Q8TES7 1133 aa16.37■□□□□ 0.21
TSPAN4-208ENST00000409531 BTN2A2Q8WVV5 523 aa16.37■□□□□ 0.21
TSPAN4-208ENST00000409531 GLYATL1Q969I3 302 aa16.37■□□□□ 0.21
TSPAN4-208ENST00000409531 CYTH2Q99418 400 aa16.37■□□□□ 0.21
TSPAN4-208ENST00000409531 FUT8Q9BYC5 575 aa16.37■□□□□ 0.21
TSPAN4-208ENST00000409531 WDR26Q9H7D7 661 aa16.37■□□□□ 0.21
TSPAN4-208ENST00000409531 FZD3Q9NPG1 666 aa16.37■□□□□ 0.21
TSPAN4-208ENST00000409531 MBNL1Q9NR56 388 aaKnown RBP16.37■□□□□ 0.21
TSPAN4-208ENST00000409531 PHPT1Q9NRX4 125 aaPredicted RBP16.37■□□□□ 0.21
TSPAN4-208ENST00000409531 ADAMTS9Q9P2N4 1935 aa16.37■□□□□ 0.21
TSPAN4-208ENST00000409531 ASCC3Q8N3C0 2202 aaKnown RBP16.37■□□□□ 0.21
TSPAN4-208ENST00000409531 DNAH14Q0VDD8 3507 aa16.37■□□□□ 0.21
TSPAN4-208ENST00000409531 BPTFQ12830 3046 aa16.36■□□□□ 0.21
TSPAN4-208ENST00000409531 PIKFYVEQ9Y2I7 2098 aa16.36■□□□□ 0.21
TSPAN4-208ENST00000409531 A6NNZ2 444 aa16.36■□□□□ 0.21
TSPAN4-208ENST00000409531 FADS2P1A8MWK0 482 aa16.36■□□□□ 0.21
TSPAN4-208ENST00000409531 GOLGA8KD6RF30 607 aa16.36■□□□□ 0.21
TSPAN4-208ENST00000409531 GOLGA8TH3BQL2 631 aa16.36■□□□□ 0.21
TSPAN4-208ENST00000409531 TLR4O00206 839 aa16.36■□□□□ 0.21
TSPAN4-208ENST00000409531 DFNA5O60443 496 aa16.36■□□□□ 0.21
TSPAN4-208ENST00000409531 UGT1A9O60656 530 aa16.36■□□□□ 0.21
TSPAN4-208ENST00000409531 SLC25A14O95258 325 aaPredicted RBP16.36■□□□□ 0.21
TSPAN4-208ENST00000409531 SOD1P00441 154 aa16.36■□□□□ 0.21
TSPAN4-208ENST00000409531 ZNF883P0CG24 379 aa16.36■□□□□ 0.21
TSPAN4-208ENST00000409531 UGT1A6P19224 532 aa16.36■□□□□ 0.21
TSPAN4-208ENST00000409531 UGT1A1P22309 533 aa16.36■□□□□ 0.21
TSPAN4-208ENST00000409531 UGT1A4P22310 534 aa16.36■□□□□ 0.21
TSPAN4-208ENST00000409531 UGT1A3P35503 534 aa16.36■□□□□ 0.21
TSPAN4-208ENST00000409531 UGT1A5P35504 534 aa16.36■□□□□ 0.21
TSPAN4-208ENST00000409531 CTSKP43235 329 aa16.36■□□□□ 0.21
TSPAN4-208ENST00000409531 YPEL5P62699 121 aa16.36■□□□□ 0.21
TSPAN4-208ENST00000409531 OVGP1Q12889 678 aa16.36■□□□□ 0.21
TSPAN4-208ENST00000409531 ILF2Q12905 390 aaKnown RBP16.36■□□□□ 0.21
TSPAN4-208ENST00000409531 KLHL38Q2WGJ6 581 aa16.36■□□□□ 0.21
TSPAN4-208ENST00000409531 LDLRAP1Q5SW96 308 aa16.36■□□□□ 0.21
TSPAN4-208ENST00000409531 PSAPL1Q6NUJ1 521 aa16.36■□□□□ 0.21
TSPAN4-208ENST00000409531 TRMT10BQ6PF06 316 aaKnown RBP16.36■□□□□ 0.21
TSPAN4-208ENST00000409531 KYAT3Q6YP21 454 aaKnown RBP16.36■□□□□ 0.21
TSPAN4-208ENST00000409531 IQCHQ86VS3 1027 aa16.36■□□□□ 0.21
TSPAN4-208ENST00000409531 CILP2Q8IUL8 1156 aa16.36■□□□□ 0.21
TSPAN4-208ENST00000409531 NXPE1Q8N323 547 aa16.36■□□□□ 0.21
TSPAN4-208ENST00000409531 PLA2G15Q8NCC3 412 aa16.36■□□□□ 0.21
TSPAN4-208ENST00000409531 GDAP1Q8TB36 358 aa16.36■□□□□ 0.21
TSPAN4-208ENST00000409531 HEXDCQ8WVB3 486 aa16.36■□□□□ 0.21
TSPAN4-208ENST00000409531 HIC2Q96JB3 615 aa16.36■□□□□ 0.21
TSPAN4-208ENST00000409531 AGAP2Q99490 1192 aa16.36■□□□□ 0.21
TSPAN4-208ENST00000409531 MYOCQ99972 504 aa16.36■□□□□ 0.21
TSPAN4-208ENST00000409531 CCDC77Q9BR77 488 aa16.36■□□□□ 0.21
TSPAN4-208ENST00000409531 ZCCHC2Q9C0B9 1178 aaKnown RBP16.36■□□□□ 0.21
TSPAN4-208ENST00000409531 ACSS3Q9H6R3 686 aa16.36■□□□□ 0.21
TSPAN4-208ENST00000409531 UGT1A7Q9HAW7 530 aa16.36■□□□□ 0.21
TSPAN4-208ENST00000409531 UGT1A10Q9HAW8 530 aa16.36■□□□□ 0.21
TSPAN4-208ENST00000409531 UGT1A8Q9HAW9 530 aa16.36■□□□□ 0.21
TSPAN4-208ENST00000409531 ARFGAP3Q9NP61 516 aa16.36■□□□□ 0.21
TSPAN4-208ENST00000409531 IARS2Q9NSE4 1012 aaKnown RBP16.36■□□□□ 0.21
TSPAN4-208ENST00000409531 IL1RAPL1Q9NZN1 696 aa16.36■□□□□ 0.21
TSPAN4-208ENST00000409531 FAM159BA6NKW6 160 aa16.35■□□□□ 0.21
TSPAN4-208ENST00000409531 K7ESM1 405 aa16.35■□□□□ 0.21
TSPAN4-208ENST00000409531 CACNB4O00305 520 aaPredicted RBP16.35■□□□□ 0.21
TSPAN4-208ENST00000409531 MAGEC1O60732 1142 aa16.35■□□□□ 0.21
TSPAN4-208ENST00000409531 HOXC4P09017 264 aaPredicted RBP16.35■□□□□ 0.21
TSPAN4-208ENST00000409531 RALBP11234 206 aa16.35■□□□□ 0.21
TSPAN4-208ENST00000409531 CD59P13987 128 aa16.35■□□□□ 0.21
TSPAN4-208ENST00000409531 CSRP1P21291 193 aaKnown RBP16.35■□□□□ 0.21
TSPAN4-208ENST00000409531 ACRV1P26436 265 aa16.35■□□□□ 0.21
TSPAN4-208ENST00000409531 HSD17B3P37058 310 aa16.35■□□□□ 0.21
TSPAN4-208ENST00000409531 RABIFP47224 123 aa16.35■□□□□ 0.21
TSPAN4-208ENST00000409531 CDK3Q00526 305 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms