RNA–Protein interactions for RNA: ENST00000409141.5

PDLIM2-206, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-206ENST00000409141 PPP1R21Q6ZMI0 780 aa17.72■□□□□ 0.43
PDLIM2-206ENST00000409141 LRRTM4Q86VH4 590 aa17.72■□□□□ 0.43
PDLIM2-206ENST00000409141 C17orf82Q86X59 251 aaPredicted RBP17.72■□□□□ 0.43
PDLIM2-206ENST00000409141 NAGSQ8N159 534 aa17.72■□□□□ 0.43
PDLIM2-206ENST00000409141 RASGEF1CQ8N431 466 aa17.72■□□□□ 0.43
PDLIM2-206ENST00000409141 ARL14Q8N4G2 192 aa17.72■□□□□ 0.43
PDLIM2-206ENST00000409141 PRELID2Q8N945 189 aa17.72■□□□□ 0.43
PDLIM2-206ENST00000409141 DNAAF3Q8N9W5 541 aa17.72■□□□□ 0.43
PDLIM2-206ENST00000409141 OR52K1Q8NGK4 314 aa17.72■□□□□ 0.43
PDLIM2-206ENST00000409141 PATE1Q8WXA2 126 aa17.72■□□□□ 0.43
PDLIM2-206ENST00000409141 MS4A14Q96JA4 679 aa17.72■□□□□ 0.43
PDLIM2-206ENST00000409141 TRBV23OR9-2A0A075B6M9 112 aa17.71■□□□□ 0.43
PDLIM2-206ENST00000409141 RHPN2P1A8MT19 583 aa17.71■□□□□ 0.43
PDLIM2-206ENST00000409141 KMOO15229 486 aa17.71■□□□□ 0.43
PDLIM2-206ENST00000409141 CASC3O15234 703 aaKnown RBP17.71■□□□□ 0.43
PDLIM2-206ENST00000409141 GPR39O43194 453 aa17.71■□□□□ 0.43
PDLIM2-206ENST00000409141 LDB2O43679 373 aa17.71■□□□□ 0.43
PDLIM2-206ENST00000409141 SNX2O60749 519 aa17.71■□□□□ 0.43
PDLIM2-206ENST00000409141 CSO75390 466 aaKnown RBP17.71■□□□□ 0.43
PDLIM2-206ENST00000409141 TCEA3O75764 348 aa17.71■□□□□ 0.43
PDLIM2-206ENST00000409141 SRP72O76094 671 aaKnown RBP17.71■□□□□ 0.43
PDLIM2-206ENST00000409141 PNLIPP16233 465 aa17.71■□□□□ 0.43
PDLIM2-206ENST00000409141 CA5AP35218 305 aa17.71■□□□□ 0.43
PDLIM2-206ENST00000409141 HADHAP40939 763 aa17.71■□□□□ 0.43
PDLIM2-206ENST00000409141 ZNF140P52738 457 aaPredicted RBP17.71■□□□□ 0.43
PDLIM2-206ENST00000409141 CCL7P80098 99 aa17.71■□□□□ 0.43
PDLIM2-206ENST00000409141 CDH17Q12864 832 aa17.71■□□□□ 0.43
PDLIM2-206ENST00000409141 SEMA5AQ13591 1074 aa17.71■□□□□ 0.43
PDLIM2-206ENST00000409141 SEPT6Q14141 434 aa17.71■□□□□ 0.43
PDLIM2-206ENST00000409141 SPIDRQ14159 915 aa17.71■□□□□ 0.43
PDLIM2-206ENST00000409141 C4orf22Q6V702 233 aa17.71■□□□□ 0.43
PDLIM2-206ENST00000409141 RBM44Q6ZP01 1051 aaKnown RBP17.71■□□□□ 0.43
PDLIM2-206ENST00000409141 GFM1Q96RP9 751 aaKnown RBP17.71■□□□□ 0.43
PDLIM2-206ENST00000409141 ZCCHC2Q9C0B9 1178 aaKnown RBP17.71■□□□□ 0.43
PDLIM2-206ENST00000409141 CCDC86Q9H6F5 360 aaKnown RBP17.71■□□□□ 0.43
PDLIM2-206ENST00000409141 ASB8Q9H765 288 aa17.71■□□□□ 0.43
PDLIM2-206ENST00000409141 KLC4Q9NSK0 619 aa17.71■□□□□ 0.43
PDLIM2-206ENST00000409141 EPG5Q9HCE0 2579 aa17.71■□□□□ 0.43
PDLIM2-206ENST00000409141 SCN8AQ9UQD0 1980 aa17.71■□□□□ 0.43
PDLIM2-206ENST00000409141 USP27XA6NNY8 438 aa17.7■□□□□ 0.42
PDLIM2-206ENST00000409141 SUN1O94901 812 aa17.7■□□□□ 0.42
PDLIM2-206ENST00000409141 GAS8O95995 478 aa17.7■□□□□ 0.42
PDLIM2-206ENST00000409141 RPLP0P05388 317 aaKnown RBP17.7■□□□□ 0.42
PDLIM2-206ENST00000409141 ZNF7P17097 686 aaPredicted RBP17.7■□□□□ 0.42
PDLIM2-206ENST00000409141 XIAPP98170 497 aa17.7■□□□□ 0.42
PDLIM2-206ENST00000409141 ST3GAL2Q16842 350 aa17.7■□□□□ 0.42
PDLIM2-206ENST00000409141 INSCQ1MX18 579 aa17.7■□□□□ 0.42
PDLIM2-206ENST00000409141 ISXQ2M1V0 245 aa17.7■□□□□ 0.42
PDLIM2-206ENST00000409141 PLA2G4EQ3MJ16 856 aa17.7■□□□□ 0.42
PDLIM2-206ENST00000409141 GPRC6AQ5T6X5 926 aa17.7■□□□□ 0.42
PDLIM2-206ENST00000409141 CCNJLQ8IV13 435 aa17.7■□□□□ 0.42
PDLIM2-206ENST00000409141 KDF1Q8NAX2 398 aaPredicted RBP17.7■□□□□ 0.42
PDLIM2-206ENST00000409141 DDHD1Q8NEL9 900 aa17.7■□□□□ 0.42
PDLIM2-206ENST00000409141 ZCCHC14Q8WYQ9 949 aaKnown RBP17.7■□□□□ 0.42
PDLIM2-206ENST00000409141 OSBPL9Q96SU4 736 aa17.7■□□□□ 0.42
PDLIM2-206ENST00000409141 NAP1L3Q99457 506 aaPredicted RBP17.7■□□□□ 0.42
PDLIM2-206ENST00000409141 C19orf43Q9BQ61 176 aa17.7■□□□□ 0.42
PDLIM2-206ENST00000409141 AP1M1Q9BXS5 423 aa17.7■□□□□ 0.42
PDLIM2-206ENST00000409141 LRRN3Q9H3W5 708 aa17.7■□□□□ 0.42
PDLIM2-206ENST00000409141 SMOXQ9NWM0 555 aa17.7■□□□□ 0.42
PDLIM2-206ENST00000409141 TBC1D29Q9UFV1 150 aa17.7■□□□□ 0.42
PDLIM2-206ENST00000409141 SLC23A2Q9UGH3 650 aa17.7■□□□□ 0.42
PDLIM2-206ENST00000409141 TTC7AQ9ULT0 858 aaPredicted RBP17.7■□□□□ 0.42
PDLIM2-206ENST00000409141 CCL22O00626 93 aa17.69■□□□□ 0.42
PDLIM2-206ENST00000409141 NTN3O00634 580 aaPredicted RBP17.69■□□□□ 0.42
PDLIM2-206ENST00000409141 EML2O95834 649 aa17.69■□□□□ 0.42
PDLIM2-206ENST00000409141 APRTP07741 180 aa17.69■□□□□ 0.42
PDLIM2-206ENST00000409141 CYP4F3Q08477 520 aa17.69■□□□□ 0.42
PDLIM2-206ENST00000409141 NFATC2Q13469 925 aa17.69■□□□□ 0.42
PDLIM2-206ENST00000409141 TRAPPC5Q8IUR0 188 aa17.69■□□□□ 0.42
PDLIM2-206ENST00000409141 ZNF547Q8IVP9 402 aa17.69■□□□□ 0.42
PDLIM2-206ENST00000409141 MDM1Q8TC05 714 aa17.69■□□□□ 0.42
PDLIM2-206ENST00000409141 DNAJC1Q96KC8 554 aaKnown RBP17.69■□□□□ 0.42
PDLIM2-206ENST00000409141 NRSN2Q9GZP1 204 aa17.69■□□□□ 0.42
PDLIM2-206ENST00000409141 OSGEPL1Q9H4B0 414 aa17.69■□□□□ 0.42
PDLIM2-206ENST00000409141 NLE1Q9NVX2 485 aaPredicted RBP17.69■□□□□ 0.42
PDLIM2-206ENST00000409141 CRLS1Q9UJA2 301 aa17.69■□□□□ 0.42
PDLIM2-206ENST00000409141 PYCARDQ9ULZ3 195 aa17.69■□□□□ 0.42
PDLIM2-206ENST00000409141 PCDHB1Q9Y5F3 818 aa17.69■□□□□ 0.42
PDLIM2-206ENST00000409141 AK5Q9Y6K8 562 aa17.69■□□□□ 0.42
PDLIM2-206ENST00000409141 FRYQ5TBA9 3013 aa17.69■□□□□ 0.42
PDLIM2-206ENST00000409141 A0A1W2PQM1 296 aa17.69■□□□□ 0.42
PDLIM2-206ENST00000409141 PGRMC1O00264 195 aaKnown RBP17.69■□□□□ 0.42
PDLIM2-206ENST00000409141 ZW10O43264 779 aa17.69■□□□□ 0.42
PDLIM2-206ENST00000409141 MSH3P20585 1137 aa17.69■□□□□ 0.42
PDLIM2-206ENST00000409141 ITGALP20701 1170 aa17.69■□□□□ 0.42
PDLIM2-206ENST00000409141 ALDH4A1P30038 563 aa17.69■□□□□ 0.42
PDLIM2-206ENST00000409141 AKT1P31749 480 aa17.69■□□□□ 0.42
PDLIM2-206ENST00000409141 GRIA1P42261 906 aa17.69■□□□□ 0.42
PDLIM2-206ENST00000409141 CLCNKAP51800 687 aa17.69■□□□□ 0.42
PDLIM2-206ENST00000409141 IYDQ6PHW0 289 aa17.69■□□□□ 0.42
PDLIM2-206ENST00000409141 SPRED1Q7Z699 444 aa17.69■□□□□ 0.42
PDLIM2-206ENST00000409141 SFRP1Q8N474 314 aa17.69■□□□□ 0.42
PDLIM2-206ENST00000409141 RASGEF1AQ8N9B8 481 aa17.69■□□□□ 0.42
PDLIM2-206ENST00000409141 COG1Q8WTW3 980 aa17.69■□□□□ 0.42
PDLIM2-206ENST00000409141 STYXQ8WUJ0 223 aa17.69■□□□□ 0.42
PDLIM2-206ENST00000409141 MAGOHBQ96A72 148 aaKnown RBP17.69■□□□□ 0.42
PDLIM2-206ENST00000409141 NXPE2Q96DL1 559 aa17.69■□□□□ 0.42
PDLIM2-206ENST00000409141 TIMM29Q9BSF4 260 aa17.69■□□□□ 0.42
PDLIM2-206ENST00000409141 FAM96AQ9H5X1 160 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms