RNA–Protein interactions for RNA: ENST00000409025.5

USP39-202, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5 BASIC

Gene USP39, Length 1,946 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-202ENST00000409025 FBXO39Q8N4B4 442 aa18.79■□□□□ 0.6
USP39-202ENST00000409025 CDCA3Q99618 268 aaPredicted RBP18.79■□□□□ 0.6
USP39-202ENST00000409025 BOCQ9BWV1 1114 aa18.79■□□□□ 0.6
USP39-202ENST00000409025 PBX4Q9BYU1 374 aa18.79■□□□□ 0.6
USP39-202ENST00000409025 B4GALT6Q9UBX8 382 aa18.79■□□□□ 0.6
USP39-202ENST00000409025 IKZF3Q9UKT9 509 aa18.79■□□□□ 0.6
USP39-202ENST00000409025 SLC27A6Q9Y2P4 619 aa18.79■□□□□ 0.6
USP39-202ENST00000409025 WASF2Q9Y6W5 498 aa18.79■□□□□ 0.6
USP39-202ENST00000409025 PDE4DIPQ5VU43 2346 aa18.79■□□□□ 0.6
USP39-202ENST00000409025 C2orf16Q68DN1 1984 aa18.79■□□□□ 0.6
USP39-202ENST00000409025 ATP6V1G2O95670 118 aa18.78■□□□□ 0.6
USP39-202ENST00000409025 CYP2A6P11509 494 aaPredicted RBP18.78■□□□□ 0.6
USP39-202ENST00000409025 CA5AP35218 305 aa18.78■□□□□ 0.6
USP39-202ENST00000409025 MNAT1P51948 309 aa18.78■□□□□ 0.6
USP39-202ENST00000409025 NXPE1Q8N323 547 aa18.78■□□□□ 0.6
USP39-202ENST00000409025 FGF13Q92913 245 aa18.78■□□□□ 0.6
USP39-202ENST00000409025 FUBP1Q96AE4 644 aaKnown RBP18.78■□□□□ 0.6
USP39-202ENST00000409025 MCUR1Q96AQ8 359 aa18.78■□□□□ 0.6
USP39-202ENST00000409025 OSBPL1AQ9BXW6 950 aa18.78■□□□□ 0.6
USP39-202ENST00000409025 BAIAP2L1Q9UHR4 511 aa18.78■□□□□ 0.6
USP39-202ENST00000409025 MSRAQ9UJ68 235 aa18.78■□□□□ 0.6
USP39-202ENST00000409025 TMCO1Q9UM00 188 aa18.78■□□□□ 0.6
USP39-202ENST00000409025 LAMA2P24043 3122 aaKnown RBP18.78■□□□□ 0.6
USP39-202ENST00000409025 DCXO43602 365 aa18.78■□□□□ 0.6
USP39-202ENST00000409025 TULP3O75386 442 aa18.78■□□□□ 0.6
USP39-202ENST00000409025 LEFTY1O75610 366 aa18.78■□□□□ 0.6
USP39-202ENST00000409025 ARSAP15289 507 aa18.78■□□□□ 0.6
USP39-202ENST00000409025 NFKBIAP25963 317 aa18.78■□□□□ 0.6
USP39-202ENST00000409025 ST8SIA6P61647 398 aa18.78■□□□□ 0.6
USP39-202ENST00000409025 ARHGEF7Q14155 803 aa18.78■□□□□ 0.6
USP39-202ENST00000409025 ARSIQ5FYB1 569 aa18.78■□□□□ 0.6
USP39-202ENST00000409025 NXNQ6DKJ4 435 aa18.78■□□□□ 0.6
USP39-202ENST00000409025 C12orf40Q86WS4 652 aa18.78■□□□□ 0.6
USP39-202ENST00000409025 CMTM5Q96DZ9 223 aa18.78■□□□□ 0.6
USP39-202ENST00000409025 PDLIM5Q96HC4 596 aaKnown RBP18.78■□□□□ 0.6
USP39-202ENST00000409025 PLEKHG4BQ96PX9 1271 aa18.78■□□□□ 0.6
USP39-202ENST00000409025 IL36AQ9UHA7 158 aa18.78■□□□□ 0.6
USP39-202ENST00000409025 FIS1Q9Y3D6 152 aa18.78■□□□□ 0.6
USP39-202ENST00000409025 AGAP14A8MT82 685 aa18.77■□□□□ 0.6
USP39-202ENST00000409025 A8MUI8 341 aa18.77■□□□□ 0.6
USP39-202ENST00000409025 JUNP05412 331 aaKnown RBP18.77■□□□□ 0.6
USP39-202ENST00000409025 C1SP09871 688 aa18.77■□□□□ 0.6
USP39-202ENST00000409025 NAA20P61599 178 aa18.77■□□□□ 0.6
USP39-202ENST00000409025 MXRA7P84157 204 aa18.77■□□□□ 0.6
USP39-202ENST00000409025 SATB1Q01826 763 aa18.77■□□□□ 0.6
USP39-202ENST00000409025 LRRC73Q5JTD7 316 aa18.77■□□□□ 0.6
USP39-202ENST00000409025 GET4Q7L5D6 327 aaPredicted RBP18.77■□□□□ 0.6
USP39-202ENST00000409025 CCDC97Q96F63 343 aaPredicted RBP18.77■□□□□ 0.6
USP39-202ENST00000409025 LRIG1Q96JA1 1093 aa18.77■□□□□ 0.6
USP39-202ENST00000409025 EBF3Q9H4W6 596 aa18.77■□□□□ 0.6
USP39-202ENST00000409025 IGFLR1Q9H665 355 aa18.77■□□□□ 0.6
USP39-202ENST00000409025 GDE1Q9NZC3 331 aa18.77■□□□□ 0.6
USP39-202ENST00000409025 PKD2L2Q9NZM6 624 aa18.77■□□□□ 0.6
USP39-202ENST00000409025 TRAF6Q9Y4K3 522 aa18.77■□□□□ 0.6
USP39-202ENST00000409025 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.76■□□□□ 0.59
USP39-202ENST00000409025 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.76■□□□□ 0.59
USP39-202ENST00000409025 HEPACAM2A8MVW5 462 aa18.76■□□□□ 0.59
USP39-202ENST00000409025 UBFD1O14562 309 aaKnown RBP18.76■□□□□ 0.59
USP39-202ENST00000409025 SIX3O95343 332 aaPredicted RBP18.76■□□□□ 0.59
USP39-202ENST00000409025 ZNF30P17039 623 aa18.76■□□□□ 0.59
USP39-202ENST00000409025 PRDX6P30041 224 aa18.76■□□□□ 0.59
USP39-202ENST00000409025 VIPR1P32241 457 aa18.76■□□□□ 0.59
USP39-202ENST00000409025 SPINT3P49223 89 aa18.76■□□□□ 0.59
USP39-202ENST00000409025 TXNDC11Q6PKC3 985 aa18.76■□□□□ 0.59
USP39-202ENST00000409025 MACC1Q6ZN28 852 aa18.76■□□□□ 0.59
USP39-202ENST00000409025 GPSM1Q86YR5 675 aa18.76■□□□□ 0.59
USP39-202ENST00000409025 ETFBKMTQ8IXQ9 262 aa18.76■□□□□ 0.59
USP39-202ENST00000409025 ARHGAP24Q8N264 748 aa18.76■□□□□ 0.59
USP39-202ENST00000409025 PHTF2Q8N3S3 785 aa18.76■□□□□ 0.59
USP39-202ENST00000409025 RBM15BQ8NDT2 890 aaKnown RBP18.76■□□□□ 0.59
USP39-202ENST00000409025 FAM13CQ8NE31 585 aa18.76■□□□□ 0.59
USP39-202ENST00000409025 PPP2R3CQ969Q6 453 aa18.76■□□□□ 0.59
USP39-202ENST00000409025 ULK4Q96C45 1275 aa18.76■□□□□ 0.59
USP39-202ENST00000409025 MAELQ96JY0 434 aaKnown RBP18.76■□□□□ 0.59
USP39-202ENST00000409025 ZFYVE19Q96K21 471 aa18.76■□□□□ 0.59
USP39-202ENST00000409025 APOL5Q9BWW9 433 aa18.76■□□□□ 0.59
USP39-202ENST00000409025 C1orf21Q9H246 121 aa18.76■□□□□ 0.59
USP39-202ENST00000409025 THG1LQ9NWX6 298 aaKnown RBP18.76■□□□□ 0.59
USP39-202ENST00000409025 ELOVL2Q9NXB9 296 aa18.76■□□□□ 0.59
USP39-202ENST00000409025 OBP2AQ9NY56 170 aa18.76■□□□□ 0.59
USP39-202ENST00000409025 ZDHHC3Q9NYG2 299 aa18.76■□□□□ 0.59
USP39-202ENST00000409025 PLA2G4CQ9UP65 541 aa18.76■□□□□ 0.59
USP39-202ENST00000409025 PRSS21Q9Y6M0 314 aa18.76■□□□□ 0.59
USP39-202ENST00000409025 TSPAN11A1L157 253 aa18.76■□□□□ 0.59
USP39-202ENST00000409025 STX16-NPEPL1H3BU86 382 aa18.76■□□□□ 0.59
USP39-202ENST00000409025 SDHDO14521 159 aa18.76■□□□□ 0.59
USP39-202ENST00000409025 STX16O14662 325 aa18.76■□□□□ 0.59
USP39-202ENST00000409025 KLK8O60259 260 aa18.76■□□□□ 0.59
USP39-202ENST00000409025 SKAP2O75563 359 aaPredicted RBP18.76■□□□□ 0.59
USP39-202ENST00000409025 SLC25A14O95258 325 aaPredicted RBP18.76■□□□□ 0.59
USP39-202ENST00000409025 TSPAN8P19075 237 aa18.76■□□□□ 0.59
USP39-202ENST00000409025 EEF1DP29692 281 aaKnown RBP18.76■□□□□ 0.59
USP39-202ENST00000409025 RGS4P49798 205 aa18.76■□□□□ 0.59
USP39-202ENST00000409025 COPAP53621 1224 aa18.76■□□□□ 0.59
USP39-202ENST00000409025 CDH13P55290 713 aa18.76■□□□□ 0.59
USP39-202ENST00000409025 BTKQ06187 659 aa18.76■□□□□ 0.59
USP39-202ENST00000409025 KLF10Q13118 480 aa18.76■□□□□ 0.59
USP39-202ENST00000409025 RAB30Q15771 203 aa18.76■□□□□ 0.59
USP39-202ENST00000409025 DNAL1Q4LDG9 190 aa18.76■□□□□ 0.59
USP39-202ENST00000409025 GPR149Q86SP6 731 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms