RNA–Protein interactions for RNA: ENST00000405675.7

CSNK1E-205, Transcript of casein kinase 1 epsilon, human

TSL 5 BASIC

Gene CSNK1E, Length 2,127 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CSNK1E-205	ENST00000405675	LINGO1	Q96FE5	620 aa		28.72	■■■□□ 2.19
CSNK1E-205	ENST00000405675	SCRN2	Q96FV2	425 aa		28.72	■■■□□ 2.19
CSNK1E-205	ENST00000405675	COMMD10	Q9Y6G5	202 aa		28.72	■■■□□ 2.19
CSNK1E-205	ENST00000405675	PRSS21	Q9Y6M0	314 aa		28.72	■■■□□ 2.19
CSNK1E-205	ENST00000405675	GLYATL1P3	A0A0U1RQE8	302 aa		28.72	■■■□□ 2.19
CSNK1E-205	ENST00000405675	CCDC189	A1A4V9	331 aa		28.72	■■■□□ 2.19
CSNK1E-205	ENST00000405675	SUPT3H	B4E1H0	165 aa		28.72	■■■□□ 2.19
CSNK1E-205	ENST00000405675	BTN3A1	O00481	513 aa		28.72	■■■□□ 2.19
CSNK1E-205	ENST00000405675	PPP6C	O00743	305 aa		28.72	■■■□□ 2.19
CSNK1E-205	ENST00000405675	SUPT3H	O75486	399 aa		28.72	■■■□□ 2.19
CSNK1E-205	ENST00000405675	ARSA	P15289	507 aa		28.72	■■■□□ 2.19
CSNK1E-205	ENST00000405675	PGM1	P36871	562 aa		28.72	■■■□□ 2.19
CSNK1E-205	ENST00000405675	EML3	Q32P44	896 aa		28.72	■■■□□ 2.19
CSNK1E-205	ENST00000405675	TPRG1	Q6ZUI0	275 aa		28.72	■■■□□ 2.19
CSNK1E-205	ENST00000405675	GPR26	Q8NDV2	337 aa		28.72	■■■□□ 2.19
CSNK1E-205	ENST00000405675	OR2A12	Q8NGT7	310 aa		28.72	■■■□□ 2.19
CSNK1E-205	ENST00000405675	OSCP1	Q8WVF1	389 aa		28.72	■■■□□ 2.19
CSNK1E-205	ENST00000405675	ASIC4	Q96FT7	647 aa		28.72	■■■□□ 2.19
CSNK1E-205	ENST00000405675	MAEL	Q96JY0	434 aa	Known RBP	28.72	■■■□□ 2.19
CSNK1E-205	ENST00000405675	CLEC1B	Q9P126	229 aa		28.72	■■■□□ 2.19
CSNK1E-205	ENST00000405675	PPIL1	Q9Y3C6	166 aa		28.72	■■■□□ 2.19
CSNK1E-205	ENST00000405675	TRBV5-4	A0A0C4DH59	114 aa		28.71	■■■□□ 2.19
CSNK1E-205	ENST00000405675	GOLGA8CP	A6NN73	597 aa		28.71	■■■□□ 2.19
CSNK1E-205	ENST00000405675		E5RI56	91 aa		28.71	■■■□□ 2.19
CSNK1E-205	ENST00000405675	WFS1	O76024	890 aa		28.71	■■■□□ 2.19
CSNK1E-205	ENST00000405675	CHRM1	P11229	460 aa	Predicted RBP	28.71	■■■□□ 2.19
CSNK1E-205	ENST00000405675	ITGAL	P20701	1170 aa		28.71	■■■□□ 2.19
CSNK1E-205	ENST00000405675	LHCGR	P22888	699 aa		28.71	■■■□□ 2.19
CSNK1E-205	ENST00000405675	DHCR24	Q15392	516 aa		28.71	■■■□□ 2.19
CSNK1E-205	ENST00000405675	RFLNA	Q6ZTI6	216 aa		28.71	■■■□□ 2.19
CSNK1E-205	ENST00000405675	MARK4	Q96L34	752 aa		28.71	■■■□□ 2.19
CSNK1E-205	ENST00000405675	MRGPRX3	Q96LB0	322 aa		28.71	■■■□□ 2.19
CSNK1E-205	ENST00000405675	NSUN5	Q96P11	429 aa	Known RBP	28.71	■■■□□ 2.19
CSNK1E-205	ENST00000405675	MCCC1	Q96RQ3	725 aa	Predicted RBP	28.71	■■■□□ 2.19
CSNK1E-205	ENST00000405675	C19orf43	Q9BQ61	176 aa		28.71	■■■□□ 2.19
CSNK1E-205	ENST00000405675	TRMO	Q9BU70	441 aa		28.71	■■■□□ 2.19
CSNK1E-205	ENST00000405675	ZNF385D	Q9H6B1	395 aa		28.71	■■■□□ 2.19
CSNK1E-205	ENST00000405675	GDE1	Q9NZC3	331 aa		28.71	■■■□□ 2.19
CSNK1E-205	ENST00000405675	APPL1	Q9UKG1	709 aa		28.71	■■■□□ 2.19
CSNK1E-205	ENST00000405675	LOC100653049	A0A140TA62	436 aa		28.7	■■■□□ 2.19
CSNK1E-205	ENST00000405675	KRT34	O76011	436 aa		28.7	■■■□□ 2.19
CSNK1E-205	ENST00000405675	GFAP	P14136	432 aa		28.7	■■■□□ 2.19
CSNK1E-205	ENST00000405675	SPAM1	P38567	509 aa		28.7	■■■□□ 2.19
CSNK1E-205	ENST00000405675	DLX2	Q07687	328 aa	Predicted RBP	28.7	■■■□□ 2.19
CSNK1E-205	ENST00000405675	FBXO48	Q5FWF7	155 aa		28.7	■■■□□ 2.19
CSNK1E-205	ENST00000405675	LKAAEAR1	Q8TD35	194 aa		28.7	■■■□□ 2.19
CSNK1E-205	ENST00000405675	BPIFB1	Q8TDL5	484 aa		28.7	■■■□□ 2.19
CSNK1E-205	ENST00000405675	ZFYVE19	Q96K21	471 aa		28.7	■■■□□ 2.19
CSNK1E-205	ENST00000405675	CATSPER2	Q96P56	530 aa		28.7	■■■□□ 2.19
CSNK1E-205	ENST00000405675	SEC23IP	Q9Y6Y8	1000 aa	Known RBP	28.7	■■■□□ 2.19
CSNK1E-205	ENST00000405675	TRPC5OS	A6NMA1	111 aa		28.7	■■■□□ 2.18
CSNK1E-205	ENST00000405675	POLR2E	P19388	210 aa	Known RBP	28.7	■■■□□ 2.18
CSNK1E-205	ENST00000405675	COPA	P53621	1224 aa		28.7	■■■□□ 2.18
CSNK1E-205	ENST00000405675	IL2	P60568	153 aa		28.7	■■■□□ 2.18
CSNK1E-205	ENST00000405675	MXRA7	P84157	204 aa		28.7	■■■□□ 2.18
CSNK1E-205	ENST00000405675	CLEC6A	Q6EIG7	209 aa		28.7	■■■□□ 2.18
CSNK1E-205	ENST00000405675	GRAMD4	Q6IC98	578 aa		28.7	■■■□□ 2.18
CSNK1E-205	ENST00000405675	AHI1	Q8N157	1196 aa		28.7	■■■□□ 2.18
CSNK1E-205	ENST00000405675	CBARP	Q8N350	705 aa	Predicted RBP	28.7	■■■□□ 2.18
CSNK1E-205	ENST00000405675	ZNF557	Q8N988	423 aa	Predicted RBP	28.7	■■■□□ 2.18
CSNK1E-205	ENST00000405675	ZNF641	Q96N77	438 aa	Predicted RBP	28.7	■■■□□ 2.18
CSNK1E-205	ENST00000405675	TRAF6	Q9Y4K3	522 aa		28.7	■■■□□ 2.18
CSNK1E-205	ENST00000405675	ZNF106	Q9H2Y7	1883 aa	Known RBP	28.69	■■■□□ 2.18
CSNK1E-205	ENST00000405675	TTC34	A8MYJ7	566 aa		28.69	■■■□□ 2.18
CSNK1E-205	ENST00000405675	CYP17A1	P05093	508 aa		28.69	■■■□□ 2.18
CSNK1E-205	ENST00000405675	SLC25A3	Q00325	362 aa		28.69	■■■□□ 2.18
CSNK1E-205	ENST00000405675	PTS	Q03393	145 aa		28.69	■■■□□ 2.18
CSNK1E-205	ENST00000405675	USP45	Q70EL2	814 aa		28.69	■■■□□ 2.18
CSNK1E-205	ENST00000405675	RAB44	Q7Z6P3	723 aa	Predicted RBP	28.69	■■■□□ 2.18
CSNK1E-205	ENST00000405675	FRS2	Q8WU20	508 aa		28.69	■■■□□ 2.18
CSNK1E-205	ENST00000405675	FAR2	Q96K12	515 aa		28.69	■■■□□ 2.18
CSNK1E-205	ENST00000405675	MTG2	Q9H4K7	406 aa		28.69	■■■□□ 2.18
CSNK1E-205	ENST00000405675	PCDHB1	Q9Y5F3	818 aa		28.69	■■■□□ 2.18
CSNK1E-205	ENST00000405675	HEPACAM2	A8MVW5	462 aa		28.69	■■■□□ 2.18
CSNK1E-205	ENST00000405675	COX4I1	P13073	169 aa		28.69	■■■□□ 2.18
CSNK1E-205	ENST00000405675	RPS3	P23396	243 aa	Known RBP eCLIP	28.69	■■■□□ 2.18
CSNK1E-205	ENST00000405675	ACRV1	P26436	265 aa		28.69	■■■□□ 2.18
CSNK1E-205	ENST00000405675	WASHC2D	Q5SRD0	308 aa		28.69	■■■□□ 2.18
CSNK1E-205	ENST00000405675	FBXO39	Q8N4B4	442 aa		28.69	■■■□□ 2.18
CSNK1E-205	ENST00000405675	CLDN19	Q8N6F1	224 aa		28.69	■■■□□ 2.18
CSNK1E-205	ENST00000405675	CMTM5	Q96DZ9	223 aa		28.69	■■■□□ 2.18
CSNK1E-205	ENST00000405675	CLPTM1L	Q96KA5	538 aa		28.69	■■■□□ 2.18
CSNK1E-205	ENST00000405675	KLHL32	Q96NJ5	620 aa		28.69	■■■□□ 2.18
CSNK1E-205	ENST00000405675	LENG8	Q96PV6	779 aa	Predicted RBP	28.69	■■■□□ 2.18
CSNK1E-205	ENST00000405675	CLPB	Q9H078	707 aa		28.69	■■■□□ 2.18
CSNK1E-205	ENST00000405675	C1orf21	Q9H246	121 aa		28.69	■■■□□ 2.18
CSNK1E-205	ENST00000405675	BRD9	Q9H8M2	597 aa		28.69	■■■□□ 2.18
CSNK1E-205	ENST00000405675	DHRS7	Q9Y394	339 aa		28.69	■■■□□ 2.18
CSNK1E-205	ENST00000405675	PEX11A	O75192	247 aa		28.68	■■■□□ 2.18
CSNK1E-205	ENST00000405675	ENTPD5	O75356	428 aa		28.68	■■■□□ 2.18
CSNK1E-205	ENST00000405675	ZNF7	P17097	686 aa	Predicted RBP	28.68	■■■□□ 2.18
CSNK1E-205	ENST00000405675	ITGB6	P18564	788 aa		28.68	■■■□□ 2.18
CSNK1E-205	ENST00000405675	PIK3R1	P27986	724 aa		28.68	■■■□□ 2.18
CSNK1E-205	ENST00000405675	HK3	P52790	923 aa		28.68	■■■□□ 2.18
CSNK1E-205	ENST00000405675	SH3BP2	P78314	561 aa		28.68	■■■□□ 2.18
CSNK1E-205	ENST00000405675	PTRHD1	Q6GMV3	140 aa	Known RBP	28.68	■■■□□ 2.18
CSNK1E-205	ENST00000405675	EP400NL	Q6ZTU2	488 aa		28.68	■■■□□ 2.18
CSNK1E-205	ENST00000405675	C12orf40	Q86WS4	652 aa		28.68	■■■□□ 2.18
CSNK1E-205	ENST00000405675	RBFA	Q8N0V3	343 aa		28.68	■■■□□ 2.18
CSNK1E-205	ENST00000405675	CPSF7	Q8N684	471 aa	Known RBP	28.68	■■■□□ 2.18

Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms