RNA–Protein interactions for RNA: ENST00000404909.5

RTN4-208, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,102 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-208ENST00000404909 SLC2A4RGQ9NR83 387 aa3.68□□□□□ -1.82
RTN4-208ENST00000404909 TRMT6Q9UJA5 497 aaKnown RBP3.68□□□□□ -1.82
RTN4-208ENST00000404909 EMCNQ9ULC0 261 aa3.68□□□□□ -1.82
RTN4-208ENST00000404909 DUSP12Q9UNI6 340 aa3.68□□□□□ -1.82
RTN4-208ENST00000404909 FADS3Q9Y5Q0 445 aa3.68□□□□□ -1.82
RTN4-208ENST00000404909 WDR87Q6ZQQ6 2873 aa3.67□□□□□ -1.82
RTN4-208ENST00000404909 TBC1D3DA0A087WVF3 549 aa3.67□□□□□ -1.82
RTN4-208ENST00000404909 TBC1D3IA0A087WXS9 549 aa3.67□□□□□ -1.82
RTN4-208ENST00000404909 TBC1D3EA0A087X179 549 aa3.67□□□□□ -1.82
RTN4-208ENST00000404909 A0A087X1B8 175 aa3.67□□□□□ -1.82
RTN4-208ENST00000404909 TBC1D3KA0A087X1G2 549 aa3.67□□□□□ -1.82
RTN4-208ENST00000404909 TBC1D3FA6NER0 549 aaPredicted RBP3.67□□□□□ -1.82
RTN4-208ENST00000404909 SHISA7A6NL88 538 aa3.67□□□□□ -1.82
RTN4-208ENST00000404909 OR2AG2A6NM03 316 aa3.67□□□□□ -1.82
RTN4-208ENST00000404909 FADS2P1A8MWK0 482 aa3.67□□□□□ -1.82
RTN4-208ENST00000404909 TBC1D3LB9A6J9 549 aa3.67□□□□□ -1.82
RTN4-208ENST00000404909 H0Y858 1186 aa3.67□□□□□ -1.82
RTN4-208ENST00000404909 MAN2B1O00754 1011 aa3.67□□□□□ -1.82
RTN4-208ENST00000404909 NDUFAB1O14561 156 aa3.67□□□□□ -1.82
RTN4-208ENST00000404909 KLHL2O95198 593 aa3.67□□□□□ -1.82
RTN4-208ENST00000404909 PYGLP06737 847 aa3.67□□□□□ -1.82
RTN4-208ENST00000404909 LTA4HP09960 611 aaKnown RBP3.67□□□□□ -1.82
RTN4-208ENST00000404909 TBC1D3HP0C7X1 549 aa3.67□□□□□ -1.82
RTN4-208ENST00000404909 CPA3P15088 417 aa3.67□□□□□ -1.82
RTN4-208ENST00000404909 MSH3P20585 1137 aa3.67□□□□□ -1.82
RTN4-208ENST00000404909 NSG1P42857 185 aa3.67□□□□□ -1.82
RTN4-208ENST00000404909 GPR1P46091 355 aa3.67□□□□□ -1.82
RTN4-208ENST00000404909 PTPN5P54829 565 aa3.67□□□□□ -1.82
RTN4-208ENST00000404909 TAS2R38P59533 333 aa3.67□□□□□ -1.82
RTN4-208ENST00000404909 TIAL1Q01085 375 aaKnown RBP eCLIP3.67□□□□□ -1.82
RTN4-208ENST00000404909 ZP2Q05996 745 aa3.67□□□□□ -1.82
RTN4-208ENST00000404909 CCDC15Q0P6D6 951 aa3.67□□□□□ -1.82
RTN4-208ENST00000404909 CHI3L2Q15782 390 aa3.67□□□□□ -1.82
RTN4-208ENST00000404909 PDK4Q16654 411 aa3.67□□□□□ -1.82
RTN4-208ENST00000404909 INSCQ1MX18 579 aa3.67□□□□□ -1.82
RTN4-208ENST00000404909 EOGTQ5NDL2 527 aa3.67□□□□□ -1.82
RTN4-208ENST00000404909 HENMT1Q5T8I9 393 aaKnown RBP3.67□□□□□ -1.82
RTN4-208ENST00000404909 AGAP9Q5VTM2 703 aa3.67□□□□□ -1.82
RTN4-208ENST00000404909 TBC1D3GQ6DHY5 549 aa3.67□□□□□ -1.82
RTN4-208ENST00000404909 TBC1D3CQ6IPX1 549 aa3.67□□□□□ -1.82
RTN4-208ENST00000404909 KLC3Q6P597 504 aa3.67□□□□□ -1.82
RTN4-208ENST00000404909 OTOAQ7RTW8 1153 aa3.67□□□□□ -1.82
RTN4-208ENST00000404909 TECPR1Q7Z6L1 1165 aa3.67□□□□□ -1.82
RTN4-208ENST00000404909 CLEC14AQ86T13 490 aa3.67□□□□□ -1.82
RTN4-208ENST00000404909 C10orf107Q8IVU9 208 aa3.67□□□□□ -1.82
RTN4-208ENST00000404909 LRRC34Q8IZ02 419 aa3.67□□□□□ -1.82
RTN4-208ENST00000404909 TBC1D3Q8IZP1 549 aaPredicted RBP3.67□□□□□ -1.82
RTN4-208ENST00000404909 CNPY4Q8N129 248 aa3.67□□□□□ -1.82
RTN4-208ENST00000404909 SIX5Q8N196 739 aa3.67□□□□□ -1.82
RTN4-208ENST00000404909 FSTL5Q8N475 847 aaPredicted RBP3.67□□□□□ -1.82
RTN4-208ENST00000404909 KCNV2Q8TDN2 545 aa3.67□□□□□ -1.82
RTN4-208ENST00000404909 SKA2Q8WVK7 121 aaPredicted RBP3.67□□□□□ -1.82
RTN4-208ENST00000404909 ZNF75CPQ92670 426 aaPredicted RBP3.67□□□□□ -1.82
RTN4-208ENST00000404909 RAB7BQ96AH8 199 aa3.67□□□□□ -1.82
RTN4-208ENST00000404909 ULK4Q96C45 1275 aa3.67□□□□□ -1.82
RTN4-208ENST00000404909 DTD2Q96FN9 168 aa3.67□□□□□ -1.82
RTN4-208ENST00000404909 THOC1Q96FV9 657 aaKnown RBP3.67□□□□□ -1.82
RTN4-208ENST00000404909 MRGPRX1Q96LB2 322 aa3.67□□□□□ -1.82
RTN4-208ENST00000404909 MAGEB18Q96M61 343 aa3.67□□□□□ -1.82
RTN4-208ENST00000404909 SLC30A3Q99726 388 aa3.67□□□□□ -1.82
RTN4-208ENST00000404909 MYOCQ99972 504 aa3.67□□□□□ -1.82
RTN4-208ENST00000404909 C1QTNF1Q9BXJ1 281 aa3.67□□□□□ -1.82
RTN4-208ENST00000404909 FOXQ1Q9C009 403 aa3.67□□□□□ -1.82
RTN4-208ENST00000404909 EPN3Q9H201 632 aa3.67□□□□□ -1.82
RTN4-208ENST00000404909 ALG9Q9H6U8 611 aa3.67□□□□□ -1.82
RTN4-208ENST00000404909 MANSC1Q9H8J5 431 aa3.67□□□□□ -1.82
RTN4-208ENST00000404909 LMAN1LQ9HAT1 526 aa3.67□□□□□ -1.82
RTN4-208ENST00000404909 SLCO1B3Q9NPD5 702 aa3.67□□□□□ -1.82
RTN4-208ENST00000404909 CD93Q9NPY3 652 aa3.67□□□□□ -1.82
RTN4-208ENST00000404909 FGFR1OP2Q9NVK5 253 aa3.67□□□□□ -1.82
RTN4-208ENST00000404909 ZDHHC3Q9NYG2 299 aa3.67□□□□□ -1.82
RTN4-208ENST00000404909 XPR1Q9UBH6 696 aa3.67□□□□□ -1.82
RTN4-208ENST00000404909 GNPTGQ9UJJ9 305 aa3.67□□□□□ -1.82
RTN4-208ENST00000404909 TMPRSS11EQ9UL52 423 aa3.67□□□□□ -1.82
RTN4-208ENST00000404909 CORO1CQ9ULV4 474 aaPredicted RBP3.67□□□□□ -1.82
RTN4-208ENST00000404909 SORCS3Q9UPU3 1222 aa3.67□□□□□ -1.82
RTN4-208ENST00000404909 ANKRD6Q9Y2G4 727 aa3.67□□□□□ -1.82
RTN4-208ENST00000404909 MED16Q9Y2X0 877 aa3.67□□□□□ -1.82
RTN4-208ENST00000404909 ANKRD12Q6UB98 2062 aa3.67□□□□□ -1.82
RTN4-208ENST00000404909 TRBV5-4A0A0C4DH59 114 aa3.67□□□□□ -1.82
RTN4-208ENST00000404909 ZBTB14O43829 449 aa3.67□□□□□ -1.82
RTN4-208ENST00000404909 TM7SF2O76062 418 aa3.67□□□□□ -1.82
RTN4-208ENST00000404909 PAK4O96013 591 aaPredicted RBP3.67□□□□□ -1.82
RTN4-208ENST00000404909 PROCP04070 461 aa3.67□□□□□ -1.82
RTN4-208ENST00000404909 PCCBP05166 539 aa3.67□□□□□ -1.82
RTN4-208ENST00000404909 GSTA1P08263 222 aa3.67□□□□□ -1.82
RTN4-208ENST00000404909 ZNF37AP17032 561 aaPredicted RBP3.67□□□□□ -1.82
RTN4-208ENST00000404909 GM2AP17900 193 aa3.67□□□□□ -1.82
RTN4-208ENST00000404909 NDUFV2P19404 249 aa3.67□□□□□ -1.82
RTN4-208ENST00000404909 TFEBP19484 476 aa3.67□□□□□ -1.82
RTN4-208ENST00000404909 B4GALNT1Q00973 533 aa3.67□□□□□ -1.82
RTN4-208ENST00000404909 SGCGQ13326 291 aa3.67□□□□□ -1.82
RTN4-208ENST00000404909 CRY1Q16526 586 aa3.67□□□□□ -1.82
RTN4-208ENST00000404909 CCDC153Q494R4 210 aa3.67□□□□□ -1.82
RTN4-208ENST00000404909 LYPLAL1Q5VWZ2 237 aa3.67□□□□□ -1.82
RTN4-208ENST00000404909 ANO7Q6IWH7 933 aa3.67□□□□□ -1.82
RTN4-208ENST00000404909 LRRC8EQ6NSJ5 796 aa3.67□□□□□ -1.82
RTN4-208ENST00000404909 CPNE9Q8IYJ1 553 aa3.67□□□□□ -1.82
RTN4-208ENST00000404909 TRAM1L1Q8N609 369 aa3.67□□□□□ -1.82
RTN4-208ENST00000404909 BEND7Q8N7W2 519 aaPredicted RBP3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms