RNA–Protein interactions for RNA: ENST00000401921.5

HDAC9-201, Transcript of histone deacetylase 9, humanhuman

TSL 1 (best) BASIC

Gene HDAC9, Length 3,254 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-201ENST00000401921 HOXC13P31276 330 aa7.63□□□□□ -1.19
HDAC9-201ENST00000401921 SLC11A1P49279 550 aa7.63□□□□□ -1.19
HDAC9-201ENST00000401921 MAPK10P53779 464 aa7.63□□□□□ -1.19
HDAC9-201ENST00000401921 TSTA3Q13630 321 aaPredicted RBP7.63□□□□□ -1.19
HDAC9-201ENST00000401921 LRP8Q14114 963 aa7.63□□□□□ -1.19
HDAC9-201ENST00000401921 DSC3Q14574 896 aa7.63□□□□□ -1.19
HDAC9-201ENST00000401921 VEPH1Q14D04 833 aa7.63□□□□□ -1.19
HDAC9-201ENST00000401921 RTP2Q5QGT7 225 aa7.63□□□□□ -1.19
HDAC9-201ENST00000401921 ATXN7L2Q5T6C5 722 aaPredicted RBP7.63□□□□□ -1.19
HDAC9-201ENST00000401921 THOC7Q6I9Y2 204 aaKnown RBP7.63□□□□□ -1.19
HDAC9-201ENST00000401921 PSAPL1Q6NUJ1 521 aa7.63□□□□□ -1.19
HDAC9-201ENST00000401921 UGT2A3Q6UWM9 527 aa7.63□□□□□ -1.19
HDAC9-201ENST00000401921 FAM151BQ6UXP7 276 aa7.63□□□□□ -1.19
HDAC9-201ENST00000401921 FAM126BQ8IXS8 530 aa7.63□□□□□ -1.19
HDAC9-201ENST00000401921 NKAPQ8N5F7 415 aaKnown RBP7.63□□□□□ -1.19
HDAC9-201ENST00000401921 DDI1Q8WTU0 396 aa7.63□□□□□ -1.19
HDAC9-201ENST00000401921 SLC29A1Q99808 456 aa7.63□□□□□ -1.19
HDAC9-201ENST00000401921 C17orf80Q9BSJ5 609 aa7.63□□□□□ -1.19
HDAC9-201ENST00000401921 TTPALQ9BTX7 342 aa7.63□□□□□ -1.19
HDAC9-201ENST00000401921 ING2Q9H160 280 aa7.63□□□□□ -1.19
HDAC9-201ENST00000401921 CRISPLD1Q9H336 500 aa7.63□□□□□ -1.19
HDAC9-201ENST00000401921 PRDM5Q9NQX1 630 aaPredicted RBP7.63□□□□□ -1.19
HDAC9-201ENST00000401921 WWOXQ9NZC7 414 aa7.63□□□□□ -1.19
HDAC9-201ENST00000401921 SUCOQ9UBS9 1254 aaKnown RBP7.63□□□□□ -1.19
HDAC9-201ENST00000401921 POLG2Q9UHN1 485 aa7.63□□□□□ -1.19
HDAC9-201ENST00000401921 ZNHIT2Q9UHR6 403 aa7.63□□□□□ -1.19
HDAC9-201ENST00000401921 CRLS1Q9UJA2 301 aa7.63□□□□□ -1.19
HDAC9-201ENST00000401921 ITGB1BP2Q9UKP3 347 aa7.63□□□□□ -1.19
HDAC9-201ENST00000401921 FCF1Q9Y324 198 aaKnown RBP7.63□□□□□ -1.19
HDAC9-201ENST00000401921 H3BSA7 217 aa7.63□□□□□ -1.19
HDAC9-201ENST00000401921 SYN3O14994 580 aa7.63□□□□□ -1.19
HDAC9-201ENST00000401921 CA12O43570 354 aa7.63□□□□□ -1.19
HDAC9-201ENST00000401921 TBL1XO60907 577 aa7.63□□□□□ -1.19
HDAC9-201ENST00000401921 CYBBP04839 570 aa7.63□□□□□ -1.19
HDAC9-201ENST00000401921 CNPP09543 421 aaKnown RBP7.63□□□□□ -1.19
HDAC9-201ENST00000401921 ATXN1LP0C7T5 689 aaKnown RBP7.63□□□□□ -1.19
HDAC9-201ENST00000401921 HOXB8P17481 243 aaPredicted RBP7.63□□□□□ -1.19
HDAC9-201ENST00000401921 SLC7A1P30825 629 aa7.63□□□□□ -1.19
HDAC9-201ENST00000401921 GGT5P36269 586 aa7.63□□□□□ -1.19
HDAC9-201ENST00000401921 GRIA2P42262 883 aa7.63□□□□□ -1.19
HDAC9-201ENST00000401921 MAPKAPK2P49137 400 aa7.63□□□□□ -1.19
HDAC9-201ENST00000401921 TTPAP49638 278 aa7.63□□□□□ -1.19
HDAC9-201ENST00000401921 GALK1P51570 392 aa7.63□□□□□ -1.19
HDAC9-201ENST00000401921 UFM1P61960 85 aa7.63□□□□□ -1.19
HDAC9-201ENST00000401921 PHEXP78562 749 aa7.63□□□□□ -1.19
HDAC9-201ENST00000401921 HPCAP84074 193 aa7.63□□□□□ -1.19
HDAC9-201ENST00000401921 FOXD4Q12950 439 aaPredicted RBP7.63□□□□□ -1.19
HDAC9-201ENST00000401921 IKBKEQ14164 716 aa7.63□□□□□ -1.19
HDAC9-201ENST00000401921 IHHQ14623 411 aa7.63□□□□□ -1.19
HDAC9-201ENST00000401921 GPRIN3Q6ZVF9 776 aa7.63□□□□□ -1.19
HDAC9-201ENST00000401921 LARP4Q71RC2 724 aaKnown RBP eCLIP7.63□□□□□ -1.19
HDAC9-201ENST00000401921 FBXO22Q8NEZ5 403 aa7.63□□□□□ -1.19
HDAC9-201ENST00000401921 SDCCAG3Q96C92 435 aa7.63□□□□□ -1.19
HDAC9-201ENST00000401921 ZFRQ96KR1 1074 aaKnown RBP7.63□□□□□ -1.19
HDAC9-201ENST00000401921 ZBTB18Q99592 522 aa7.63□□□□□ -1.19
HDAC9-201ENST00000401921 DCUN1D5Q9BTE7 237 aa7.63□□□□□ -1.19
HDAC9-201ENST00000401921 TBCDQ9BTW9 1192 aa7.63□□□□□ -1.19
HDAC9-201ENST00000401921 OSBPL11Q9BXB4 747 aa7.63□□□□□ -1.19
HDAC9-201ENST00000401921 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.63□□□□□ -1.19
HDAC9-201ENST00000401921 MAGEH1Q9H213 219 aa7.63□□□□□ -1.19
HDAC9-201ENST00000401921 ZFP14Q9HCL3 533 aa7.63□□□□□ -1.19
HDAC9-201ENST00000401921 POLR3BQ9NW08 1133 aaPredicted RBP7.63□□□□□ -1.19
HDAC9-201ENST00000401921 TUBA8Q9NY65 449 aaPredicted RBP7.63□□□□□ -1.19
HDAC9-201ENST00000401921 NEU3Q9UQ49 428 aa7.63□□□□□ -1.19
HDAC9-201ENST00000401921 TMED5Q9Y3A6 229 aa7.63□□□□□ -1.19
HDAC9-201ENST00000401921 NUP214P35658 2090 aaPredicted RBP7.63□□□□□ -1.19
HDAC9-201ENST00000401921 BOLA2-SMG1P6H3BVE0 249 aa7.63□□□□□ -1.19
HDAC9-201ENST00000401921 ACOT8O14734 319 aa7.63□□□□□ -1.19
HDAC9-201ENST00000401921 CLOCKO15516 846 aa7.63□□□□□ -1.19
HDAC9-201ENST00000401921 NOL3O60936 208 aaKnown RBP7.63□□□□□ -1.19
HDAC9-201ENST00000401921 ADAMTS4O75173 837 aa7.63□□□□□ -1.19
HDAC9-201ENST00000401921 SLC22A3O75751 556 aa7.63□□□□□ -1.19
HDAC9-201ENST00000401921 ALPIP09923 528 aa7.63□□□□□ -1.19
HDAC9-201ENST00000401921 IDO1P14902 403 aa7.63□□□□□ -1.19
HDAC9-201ENST00000401921 CAPN3P20807 821 aa7.63□□□□□ -1.19
HDAC9-201ENST00000401921 ATP6V0D1P61421 351 aa7.63□□□□□ -1.19
HDAC9-201ENST00000401921 SMAD3P84022 425 aaKnown RBP7.63□□□□□ -1.19
HDAC9-201ENST00000401921 NRG1Q02297 640 aaPredicted RBP7.63□□□□□ -1.19
HDAC9-201ENST00000401921 IRF5Q13568 498 aa7.63□□□□□ -1.19
HDAC9-201ENST00000401921 ARHGEF7Q14155 803 aa7.63□□□□□ -1.19
HDAC9-201ENST00000401921 B3GNT6Q6ZMB0 384 aa7.63□□□□□ -1.19
HDAC9-201ENST00000401921 TPGS1Q6ZTW0 290 aa7.63□□□□□ -1.19
HDAC9-201ENST00000401921 GET4Q7L5D6 327 aaPredicted RBP7.63□□□□□ -1.19
HDAC9-201ENST00000401921 LPCAT2Q7L5N7 544 aa7.63□□□□□ -1.19
HDAC9-201ENST00000401921 MILR1Q7Z6M3 343 aa7.63□□□□□ -1.19
HDAC9-201ENST00000401921 ZBTB46Q86UZ6 589 aa7.63□□□□□ -1.19
HDAC9-201ENST00000401921 RETREG3Q86VR2 466 aa7.63□□□□□ -1.19
HDAC9-201ENST00000401921 SLC15A3Q8IY34 581 aa7.63□□□□□ -1.19
HDAC9-201ENST00000401921 OFCC1Q8IZS5 231 aa7.63□□□□□ -1.19
HDAC9-201ENST00000401921 SCML4Q8N228 414 aa7.63□□□□□ -1.19
HDAC9-201ENST00000401921 CLDN19Q8N6F1 224 aa7.63□□□□□ -1.19
HDAC9-201ENST00000401921 LRRC58Q96CX6 371 aa7.63□□□□□ -1.19
HDAC9-201ENST00000401921 PHF12Q96QT6 1004 aa7.63□□□□□ -1.19
HDAC9-201ENST00000401921 RANBP9Q96S59 729 aa7.63□□□□□ -1.19
HDAC9-201ENST00000401921 TCF12Q99081 682 aa7.63□□□□□ -1.19
HDAC9-201ENST00000401921 PKMYT1Q99640 499 aa7.63□□□□□ -1.19
HDAC9-201ENST00000401921 HOPXQ9BPY8 73 aaPredicted RBP7.63□□□□□ -1.19
HDAC9-201ENST00000401921 MRPS26Q9BYN8 205 aaKnown RBP7.63□□□□□ -1.19
HDAC9-201ENST00000401921 ADNPQ9H2P0 1102 aa7.63□□□□□ -1.19
HDAC9-201ENST00000401921 TFB2MQ9H5Q4 396 aaKnown RBP7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms