RNA–Protein interactions for RNA: ENST00000401607.6

CPNE1-205, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,795 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-205ENST00000401607 SKA1Q96BD8 255 aa25.39■■□□□ 1.65
CPNE1-205ENST00000401607 SIKE1Q9BRV8 207 aa25.39■■□□□ 1.65
CPNE1-205ENST00000401607 SARS2Q9NP81 518 aaKnown RBP25.39■■□□□ 1.65
CPNE1-205ENST00000401607 ZDHHC3Q9NYG2 299 aa25.39■■□□□ 1.65
CPNE1-205ENST00000401607 ITM2BQ9Y287 266 aa25.39■■□□□ 1.65
CPNE1-205ENST00000401607 DHRS7Q9Y394 339 aa25.39■■□□□ 1.65
CPNE1-205ENST00000401607 PLXNA2O75051 1894 aa25.38■■□□□ 1.65
CPNE1-205ENST00000401607 ZNF195O14628 629 aa25.38■■□□□ 1.65
CPNE1-205ENST00000401607 NPHS1O60500 1241 aa25.38■■□□□ 1.65
CPNE1-205ENST00000401607 ALOX15P16050 662 aaPredicted RBP25.38■■□□□ 1.65
CPNE1-205ENST00000401607 CORO7P57737 925 aa25.38■■□□□ 1.65
CPNE1-205ENST00000401607 DCDC1P59894 354 aa25.38■■□□□ 1.65
CPNE1-205ENST00000401607 UGT3A1Q6NUS8 523 aa25.38■■□□□ 1.65
CPNE1-205ENST00000401607 MACC1Q6ZN28 852 aa25.38■■□□□ 1.65
CPNE1-205ENST00000401607 Q6ZVL8 140 aa25.38■■□□□ 1.65
CPNE1-205ENST00000401607 MTDHQ86UE4 582 aaKnown RBP25.38■■□□□ 1.65
CPNE1-205ENST00000401607 CCNYL1Q8N7R7 359 aa25.38■■□□□ 1.65
CPNE1-205ENST00000401607 SUSD6Q92537 303 aa25.38■■□□□ 1.65
CPNE1-205ENST00000401607 NCKIPSDQ9NZQ3 722 aa25.38■■□□□ 1.65
CPNE1-205ENST00000401607 SLC12A4Q9UP95 1085 aa25.38■■□□□ 1.65
CPNE1-205ENST00000401607 APODP05090 189 aa25.37■■□□□ 1.65
CPNE1-205ENST00000401607 MTHFD2P13995 350 aa25.37■■□□□ 1.65
CPNE1-205ENST00000401607 MPSTP25325 297 aa25.37■■□□□ 1.65
CPNE1-205ENST00000401607 SERPINB3P29508 390 aa25.37■■□□□ 1.65
CPNE1-205ENST00000401607 ETV3P41162 512 aa25.37■■□□□ 1.65
CPNE1-205ENST00000401607 NFKB2Q00653 900 aa25.37■■□□□ 1.65
CPNE1-205ENST00000401607 B4GALNT1Q00973 533 aa25.37■■□□□ 1.65
CPNE1-205ENST00000401607 PIWIL4Q7Z3Z4 852 aaKnown RBP25.37■■□□□ 1.65
CPNE1-205ENST00000401607 SLC22A9Q8IVM8 553 aa25.37■■□□□ 1.65
CPNE1-205ENST00000401607 EEF1AKMT1Q8WVE0 214 aa25.37■■□□□ 1.65
CPNE1-205ENST00000401607 SCAMP4Q969E2 229 aa25.37■■□□□ 1.65
CPNE1-205ENST00000401607 ULK4Q96C45 1275 aa25.37■■□□□ 1.65
CPNE1-205ENST00000401607 LINGO1Q96FE5 620 aa25.37■■□□□ 1.65
CPNE1-205ENST00000401607 NECTIN4Q96NY8 510 aa25.37■■□□□ 1.65
CPNE1-205ENST00000401607 EBF4Q9BQW3 602 aa25.37■■□□□ 1.65
CPNE1-205ENST00000401607 CDH19Q9H159 772 aa25.37■■□□□ 1.65
CPNE1-205ENST00000401607 FAM83DQ9H4H8 585 aa25.37■■□□□ 1.65
CPNE1-205ENST00000401607 CACNA2D2Q9NY47 1150 aa25.37■■□□□ 1.65
CPNE1-205ENST00000401607 NFKBIL1Q9UBC1 381 aaPredicted RBP25.37■■□□□ 1.65
CPNE1-205ENST00000401607 HAO1Q9UJM8 370 aa25.37■■□□□ 1.65
CPNE1-205ENST00000401607 RAP2CQ9Y3L5 183 aa25.37■■□□□ 1.65
CPNE1-205ENST00000401607 IGLV3-16A0A075B6K0 115 aa25.36■■□□□ 1.65
CPNE1-205ENST00000401607 ANHXE9PGG2 379 aa25.36■■□□□ 1.65
CPNE1-205ENST00000401607 KERAO60938 352 aa25.36■■□□□ 1.65
CPNE1-205ENST00000401607 POU3F3P20264 500 aaPredicted RBP25.36■■□□□ 1.65
CPNE1-205ENST00000401607 IL2P60568 153 aa25.36■■□□□ 1.65
CPNE1-205ENST00000401607 BNIP1Q12981 228 aa25.36■■□□□ 1.65
CPNE1-205ENST00000401607 TSNQ15631 228 aaKnown RBP25.36■■□□□ 1.65
CPNE1-205ENST00000401607 ERAP2Q6P179 960 aa25.36■■□□□ 1.65
CPNE1-205ENST00000401607 LIPIQ6XZB0 460 aa25.36■■□□□ 1.65
CPNE1-205ENST00000401607 TECPR1Q7Z6L1 1165 aa25.36■■□□□ 1.65
CPNE1-205ENST00000401607 EXT2Q93063 718 aa25.36■■□□□ 1.65
CPNE1-205ENST00000401607 PHF21BQ96EK2 531 aa25.36■■□□□ 1.65
CPNE1-205ENST00000401607 WWP1Q9H0M0 922 aa25.36■■□□□ 1.65
CPNE1-205ENST00000401607 ABCG8Q9H221 673 aa25.36■■□□□ 1.65
CPNE1-205ENST00000401607 PRSS16Q9NQE7 514 aa25.36■■□□□ 1.65
CPNE1-205ENST00000401607 UBXN8O00124 270 aa25.36■■□□□ 1.65
CPNE1-205ENST00000401607 CDC7O00311 574 aa25.36■■□□□ 1.65
CPNE1-205ENST00000401607 GM2AP17900 193 aa25.36■■□□□ 1.65
CPNE1-205ENST00000401607 NSG1P42857 185 aa25.36■■□□□ 1.65
CPNE1-205ENST00000401607 SCTRP47872 440 aa25.36■■□□□ 1.65
CPNE1-205ENST00000401607 PREPLQ4J6C6 727 aaPredicted RBP25.36■■□□□ 1.65
CPNE1-205ENST00000401607 STAG3L4Q8TBR4 150 aa25.36■■□□□ 1.65
CPNE1-205ENST00000401607 DTX3LQ8TDB6 740 aa25.36■■□□□ 1.65
CPNE1-205ENST00000401607 COPS8Q99627 209 aa25.36■■□□□ 1.65
CPNE1-205ENST00000401607 SPATA16Q9BXB7 569 aa25.36■■□□□ 1.65
CPNE1-205ENST00000401607 ILKAPQ9H0C8 392 aaPredicted RBP25.36■■□□□ 1.65
CPNE1-205ENST00000401607 SMOXQ9NWM0 555 aa25.36■■□□□ 1.65
CPNE1-205ENST00000401607 TNRC18O15417 2968 aaPredicted RBP25.35■■□□□ 1.65
CPNE1-205ENST00000401607 NPEPPSL1A6NEC2 478 aa25.35■■□□□ 1.65
CPNE1-205ENST00000401607 SMIM24O75264 130 aa25.35■■□□□ 1.65
CPNE1-205ENST00000401607 EPHX1P07099 455 aa25.35■■□□□ 1.65
CPNE1-205ENST00000401607 ITGB6P18564 788 aa25.35■■□□□ 1.65
CPNE1-205ENST00000401607 SERPINB5P36952 375 aa25.35■■□□□ 1.65
CPNE1-205ENST00000401607 HENMT1Q5T8I9 393 aaKnown RBP25.35■■□□□ 1.65
CPNE1-205ENST00000401607 ALYREFQ86V81 257 aaKnown RBP25.35■■□□□ 1.65
CPNE1-205ENST00000401607 ACTR5Q9H9F9 607 aaPredicted RBP25.35■■□□□ 1.65
CPNE1-205ENST00000401607 ZFP69BQ9UJL9 534 aa25.35■■□□□ 1.65
CPNE1-205ENST00000401607 TICRRQ7Z2Z1 1910 aa25.35■■□□□ 1.65
CPNE1-205ENST00000401607 PLK4O00444 970 aa25.34■■□□□ 1.65
CPNE1-205ENST00000401607 BTN3A1O00481 513 aa25.34■■□□□ 1.65
CPNE1-205ENST00000401607 SLC25A14O95258 325 aaPredicted RBP25.34■■□□□ 1.65
CPNE1-205ENST00000401607 TPBGLP0DKB5 382 aa25.34■■□□□ 1.65
CPNE1-205ENST00000401607 IMPDH1P20839 514 aa25.34■■□□□ 1.65
CPNE1-205ENST00000401607 PRKAA1Q13131 559 aa25.34■■□□□ 1.65
CPNE1-205ENST00000401607 GPRC6AQ5T6X5 926 aa25.34■■□□□ 1.65
CPNE1-205ENST00000401607 CLNKQ7Z7G1 428 aa25.34■■□□□ 1.65
CPNE1-205ENST00000401607 INPP5DQ92835 1189 aa25.34■■□□□ 1.65
CPNE1-205ENST00000401607 FUBP1Q96AE4 644 aaKnown RBP25.34■■□□□ 1.65
CPNE1-205ENST00000401607 L3HYPDHQ96EM0 354 aa25.34■■□□□ 1.65
CPNE1-205ENST00000401607 PDLIM5Q96HC4 596 aaKnown RBP25.34■■□□□ 1.65
CPNE1-205ENST00000401607 PRR11Q96HE9 360 aaPredicted RBP25.34■■□□□ 1.65
CPNE1-205ENST00000401607 CNDP1Q96KN2 507 aa25.34■■□□□ 1.65
CPNE1-205ENST00000401607 RAD18Q9NS91 495 aa25.34■■□□□ 1.65
CPNE1-205ENST00000401607 DNAJC28Q9NX36 388 aa25.34■■□□□ 1.65
CPNE1-205ENST00000401607 SUN2Q9UH99 717 aa25.34■■□□□ 1.65
CPNE1-205ENST00000401607 RGSL1A5PLK6 1076 aa25.33■■□□□ 1.65
CPNE1-205ENST00000401607 ELFN1P0C7U0 828 aa25.33■■□□□ 1.65
CPNE1-205ENST00000401607 HNRNPLP14866 589 aaKnown RBP eCLIP25.33■■□□□ 1.652e-8■□□□□ 10.1
CPNE1-205ENST00000401607 GALK1P51570 392 aa25.33■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms