RNA–Protein interactions for RNA: ENST00000399976.6

USP16-204, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP16, Length 2,963 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-204ENST00000399976 CEACAM1P13688 526 aa7.44□□□□□ -1.22
USP16-204ENST00000399976 CD59P13987 128 aa7.44□□□□□ -1.22
USP16-204ENST00000399976 C2orf54Q08AI8 447 aa7.44□□□□□ -1.22
USP16-204ENST00000399976 PDE1CQ14123 709 aaPredicted RBP7.44□□□□□ -1.22
USP16-204ENST00000399976 KIR2DS5Q14953 304 aa7.44□□□□□ -1.22
USP16-204ENST00000399976 SLMAPQ14BN4 828 aa7.44□□□□□ -1.22
USP16-204ENST00000399976 PROX2Q3B8N5 592 aa7.44□□□□□ -1.22
USP16-204ENST00000399976 POM121L1PQ3SYA9 428 aa7.44□□□□□ -1.22
USP16-204ENST00000399976 C6orf132Q5T0Z8 1188 aa7.44□□□□□ -1.22
USP16-204ENST00000399976 WDR93Q6P2C0 686 aa7.44□□□□□ -1.22
USP16-204ENST00000399976 LRRTM4Q86VH4 590 aa7.44□□□□□ -1.22
USP16-204ENST00000399976 KLHL7Q8IXQ5 586 aa7.44□□□□□ -1.22
USP16-204ENST00000399976 IFT20Q8IY31 132 aa7.44□□□□□ -1.22
USP16-204ENST00000399976 MINDY1Q8N5J2 469 aa7.44□□□□□ -1.22
USP16-204ENST00000399976 BEND7Q8N7W2 519 aaPredicted RBP7.44□□□□□ -1.22
USP16-204ENST00000399976 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.44□□□□□ -1.22
USP16-204ENST00000399976 PLA2G15Q8NCC3 412 aa7.44□□□□□ -1.22
USP16-204ENST00000399976 ZNF548Q8NEK5 533 aaPredicted RBP7.44□□□□□ -1.22
USP16-204ENST00000399976 SNX19Q92543 992 aa7.44□□□□□ -1.22
USP16-204ENST00000399976 SPATA16Q9BXB7 569 aa7.44□□□□□ -1.22
USP16-204ENST00000399976 DPEP2Q9H4A9 486 aa7.44□□□□□ -1.22
USP16-204ENST00000399976 SYBUQ9NX95 663 aa7.44□□□□□ -1.22
USP16-204ENST00000399976 SMARCAL1Q9NZC9 954 aa7.44□□□□□ -1.22
USP16-204ENST00000399976 FNDC3AQ9Y2H6 1198 aaKnown RBP7.44□□□□□ -1.22
USP16-204ENST00000399976 TCRBV7S3A2A0A539 114 aa7.44□□□□□ -1.22
USP16-204ENST00000399976 AQP9O43315 295 aa7.44□□□□□ -1.22
USP16-204ENST00000399976 FAM155BO75949 473 aa7.44□□□□□ -1.22
USP16-204ENST00000399976 FKBP9O95302 570 aa7.44□□□□□ -1.22
USP16-204ENST00000399976 TRIM16O95361 564 aa7.44□□□□□ -1.22
USP16-204ENST00000399976 FTH1P02794 183 aa7.44□□□□□ -1.22
USP16-204ENST00000399976 PCCBP05166 539 aa7.44□□□□□ -1.22
USP16-204ENST00000399976 MC4RP32245 332 aa7.44□□□□□ -1.22
USP16-204ENST00000399976 GPR3P46089 330 aa7.44□□□□□ -1.22
USP16-204ENST00000399976 FASLGP48023 281 aa7.44□□□□□ -1.22
USP16-204ENST00000399976 LEPRP48357 1165 aaKnown RBP7.44□□□□□ -1.22
USP16-204ENST00000399976 RPIAP49247 311 aa7.44□□□□□ -1.22
USP16-204ENST00000399976 IRX4P78413 519 aa7.44□□□□□ -1.22
USP16-204ENST00000399976 CHRNA6Q15825 494 aa7.44□□□□□ -1.22
USP16-204ENST00000399976 ATP13A5Q4VNC0 1218 aa7.44□□□□□ -1.22
USP16-204ENST00000399976 GPRC6AQ5T6X5 926 aa7.44□□□□□ -1.22
USP16-204ENST00000399976 ABRAXAS1Q6UWZ7 409 aa7.44□□□□□ -1.22
USP16-204ENST00000399976 B4GALNT4Q76KP1 1039 aa7.44□□□□□ -1.22
USP16-204ENST00000399976 RASGRP3Q8IV61 690 aa7.44□□□□□ -1.22
USP16-204ENST00000399976 C2CD4AQ8NCU7 369 aaPredicted RBP7.44□□□□□ -1.22
USP16-204ENST00000399976 OR2L2Q8NH16 312 aa7.44□□□□□ -1.22
USP16-204ENST00000399976 HM13Q8TCT9 377 aa7.44□□□□□ -1.22
USP16-204ENST00000399976 NAT6Q93015 286 aa7.44□□□□□ -1.22
USP16-204ENST00000399976 DNAJC1Q96KC8 554 aaKnown RBP7.44□□□□□ -1.22
USP16-204ENST00000399976 COPS8Q99627 209 aa7.44□□□□□ -1.22
USP16-204ENST00000399976 RAB33BQ9H082 229 aa7.44□□□□□ -1.22
USP16-204ENST00000399976 GAREM1Q9H706 876 aa7.44□□□□□ -1.22
USP16-204ENST00000399976 TM7SF3Q9NS93 570 aa7.44□□□□□ -1.22
USP16-204ENST00000399976 CATSPERZQ9NTU4 200 aa7.44□□□□□ -1.22
USP16-204ENST00000399976 INVSQ9Y283 1065 aa7.44□□□□□ -1.22
USP16-204ENST00000399976 COQ6Q9Y2Z9 468 aa7.44□□□□□ -1.22
USP16-204ENST00000399976 HEBP2Q9Y5Z4 205 aa7.44□□□□□ -1.22
USP16-204ENST00000399976 ADAMTS20P59510 1910 aa7.43□□□□□ -1.22
USP16-204ENST00000399976 H0Y8X5 98 aa7.43□□□□□ -1.22
USP16-204ENST00000399976 GIMD1P0DJR0 217 aa7.43□□□□□ -1.22
USP16-204ENST00000399976 CBSLP0DN79 551 aa7.43□□□□□ -1.22
USP16-204ENST00000399976 CKMT1AP12532 417 aa7.43□□□□□ -1.22
USP16-204ENST00000399976 ATP1B2P14415 290 aaPredicted RBP7.43□□□□□ -1.22
USP16-204ENST00000399976 ZNF7P17097 686 aaPredicted RBP7.43□□□□□ -1.22
USP16-204ENST00000399976 MGAT1P26572 445 aa7.43□□□□□ -1.22
USP16-204ENST00000399976 ARNTP27540 789 aa7.43□□□□□ -1.22
USP16-204ENST00000399976 CBSP35520 551 aa7.43□□□□□ -1.22
USP16-204ENST00000399976 CSE1LP55060 971 aaKnown RBP7.43□□□□□ -1.22
USP16-204ENST00000399976 SPEM2Q0P670 501 aa7.43□□□□□ -1.22
USP16-204ENST00000399976 CRYMQ14894 314 aa7.43□□□□□ -1.22
USP16-204ENST00000399976 AASDHQ4L235 1098 aaPredicted RBP7.43□□□□□ -1.22
USP16-204ENST00000399976 FASTKD1Q53R41 847 aaKnown RBP7.43□□□□□ -1.22
USP16-204ENST00000399976 CERCAMQ5T4B2 595 aa7.43□□□□□ -1.22
USP16-204ENST00000399976 STPG1Q5TH74 334 aa7.43□□□□□ -1.22
USP16-204ENST00000399976 C11orf96Q7Z7L8 435 aa7.43□□□□□ -1.22
USP16-204ENST00000399976 SDCCAG8Q86SQ7 713 aaPredicted RBP7.43□□□□□ -1.22
USP16-204ENST00000399976 CACUL1Q86Y37 369 aa7.43□□□□□ -1.22
USP16-204ENST00000399976 GALNT13Q8IUC8 556 aa7.43□□□□□ -1.22
USP16-204ENST00000399976 FBXO15Q8NCQ5 510 aaPredicted RBP7.43□□□□□ -1.22
USP16-204ENST00000399976 GPR156Q8NFN8 814 aa7.43□□□□□ -1.22
USP16-204ENST00000399976 GSDMBQ8TAX9 411 aa7.43□□□□□ -1.22
USP16-204ENST00000399976 PANX3Q96QZ0 392 aa7.43□□□□□ -1.22
USP16-204ENST00000399976 LRRC61Q9BV99 259 aa7.43□□□□□ -1.22
USP16-204ENST00000399976 SLC32A1Q9H598 525 aa7.43□□□□□ -1.22
USP16-204ENST00000399976 EPB41L5Q9HCM4 733 aa7.43□□□□□ -1.22
USP16-204ENST00000399976 ENAMQ9NRM1 1142 aa7.43□□□□□ -1.22
USP16-204ENST00000399976 FKBPLQ9UIM3 349 aa7.43□□□□□ -1.22
USP16-204ENST00000399976 PIKFYVEQ9Y2I7 2098 aa7.43□□□□□ -1.22
USP16-204ENST00000399976 SGTAO43765 313 aa7.43□□□□□ -1.22
USP16-204ENST00000399976 SLC25A14O95258 325 aaPredicted RBP7.43□□□□□ -1.22
USP16-204ENST00000399976 XRCC1P18887 633 aaPredicted RBP7.43□□□□□ -1.22
USP16-204ENST00000399976 DGKAP23743 735 aa7.43□□□□□ -1.22
USP16-204ENST00000399976 NDUFS1P28331 727 aa7.43□□□□□ -1.22
USP16-204ENST00000399976 MAT2AP31153 395 aaKnown RBP7.43□□□□□ -1.22
USP16-204ENST00000399976 STX2P32856 288 aa7.43□□□□□ -1.22
USP16-204ENST00000399976 MLLT3P42568 568 aaPredicted RBP7.43□□□□□ -1.22
USP16-204ENST00000399976 CSNK1EP49674 416 aaKnown RBP7.43□□□□□ -1.22
USP16-204ENST00000399976 TMEM115Q12893 351 aaPredicted RBP7.43□□□□□ -1.22
USP16-204ENST00000399976 PLEKHS1Q5SXH7 462 aa7.43□□□□□ -1.22
USP16-204ENST00000399976 FAXCQ5TGI0 409 aa7.43□□□□□ -1.22
USP16-204ENST00000399976 MARK2Q7KZI7 788 aaKnown RBP7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms