RNA–Protein interactions for RNA: ENST00000399455.2

USP47-203, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP47, Length 7,396 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-203ENST00000399455 UBR2Q8IWV8 1755 aa7.89□□□□□ -1.15
USP47-203ENST00000399455 LOC100653049A0A140TA62 436 aa7.89□□□□□ -1.15
USP47-203ENST00000399455 ATG7O95352 703 aa7.89□□□□□ -1.15
USP47-203ENST00000399455 GUCY1A3Q02108 690 aa7.89□□□□□ -1.15
USP47-203ENST00000399455 CPTPQ5TA50 214 aa7.89□□□□□ -1.15
USP47-203ENST00000399455 TCEAL6Q6IPX3 200 aa7.89□□□□□ -1.15
USP47-203ENST00000399455 NUP54Q7Z3B4 507 aa7.89□□□□□ -1.15
USP47-203ENST00000399455 SLC4A11Q8NBS3 891 aa7.89□□□□□ -1.15
USP47-203ENST00000399455 REEP1Q9H902 201 aa7.89□□□□□ -1.15
USP47-203ENST00000399455 B4GALT7Q9UBV7 327 aa7.89□□□□□ -1.15
USP47-203ENST00000399455 MKL2Q9ULH7 1088 aa7.89□□□□□ -1.15
USP47-203ENST00000399455 IGLV3-22A0A075B6J6 115 aa7.89□□□□□ -1.15
USP47-203ENST00000399455 MTMR11A4FU01 709 aa7.89□□□□□ -1.15
USP47-203ENST00000399455 KHNYNO15037 678 aaKnown RBP7.89□□□□□ -1.15
USP47-203ENST00000399455 TSPAN6O43657 245 aa7.89□□□□□ -1.15
USP47-203ENST00000399455 ERCC1P07992 297 aaPredicted RBP7.89□□□□□ -1.15
USP47-203ENST00000399455 HOXB6P17509 224 aaKnown RBP7.89□□□□□ -1.15
USP47-203ENST00000399455 UGT2B15P54855 530 aa7.89□□□□□ -1.15
USP47-203ENST00000399455 CSNK2BP67870 215 aa7.89□□□□□ -1.15
USP47-203ENST00000399455 LYSMD4Q5XG99 296 aa7.89□□□□□ -1.15
USP47-203ENST00000399455 TXNDC8Q6A555 127 aa7.89□□□□□ -1.15
USP47-203ENST00000399455 ACMSDQ8TDX5 336 aa7.89□□□□□ -1.15
USP47-203ENST00000399455 SLC25A23Q9BV35 468 aa7.89□□□□□ -1.15
USP47-203ENST00000399455 GPR174Q9BXC1 333 aa7.89□□□□□ -1.15
USP47-203ENST00000399455 BCL2L14Q9BZR8 327 aa7.89□□□□□ -1.15
USP47-203ENST00000399455 DDX18Q9NVP1 670 aaKnown RBP7.89□□□□□ -1.15
USP47-203ENST00000399455 EDARQ9UNE0 448 aa7.89□□□□□ -1.15
USP47-203ENST00000399455 MYL12BO14950 172 aa7.89□□□□□ -1.15
USP47-203ENST00000399455 CLDN9O95484 217 aa7.89□□□□□ -1.15
USP47-203ENST00000399455 ACP5P13686 325 aa7.89□□□□□ -1.15
USP47-203ENST00000399455 CPN2P22792 545 aa7.89□□□□□ -1.15
USP47-203ENST00000399455 ITPKAP23677 461 aa7.89□□□□□ -1.15
USP47-203ENST00000399455 RPL38P63173 70 aaKnown RBP7.89□□□□□ -1.15
USP47-203ENST00000399455 SULT1C3Q6IMI6 304 aa7.89□□□□□ -1.15
USP47-203ENST00000399455 UNC5AQ6ZN44 842 aa7.89□□□□□ -1.15
USP47-203ENST00000399455 ZSCAN2Q7Z7L9 614 aaPredicted RBP7.89□□□□□ -1.15
USP47-203ENST00000399455 MPP5Q8N3R9 675 aa7.89□□□□□ -1.15
USP47-203ENST00000399455 SETD9Q8NE22 299 aa7.89□□□□□ -1.15
USP47-203ENST00000399455 SLC2A11Q9BYW1 496 aa7.89□□□□□ -1.15
USP47-203ENST00000399455 ACTL7BQ9Y614 415 aa7.89□□□□□ -1.15
USP47-203ENST00000399455 RRP8O43159 456 aaKnown RBP7.89□□□□□ -1.15
USP47-203ENST00000399455 LILRB3O75022 631 aa7.89□□□□□ -1.15
USP47-203ENST00000399455 C4BPBP20851 252 aa7.89□□□□□ -1.15
USP47-203ENST00000399455 GATMP50440 423 aa7.89□□□□□ -1.15
USP47-203ENST00000399455 EIPR1Q53HC9 387 aa7.89□□□□□ -1.15
USP47-203ENST00000399455 KIAA1161Q6NSJ0 714 aa7.89□□□□□ -1.15
USP47-203ENST00000399455 BEND5Q7L4P6 421 aa7.89□□□□□ -1.15
USP47-203ENST00000399455 P2RY11Q96G91 374 aa7.89□□□□□ -1.15
USP47-203ENST00000399455 Q96MT0 163 aa7.89□□□□□ -1.15
USP47-203ENST00000399455 TMEM209Q96SK2 561 aa7.89□□□□□ -1.15
USP47-203ENST00000399455 C4AP0C0L4 1744 aa7.89□□□□□ -1.15
USP47-203ENST00000399455 H7C0S8 307 aa7.89□□□□□ -1.15
USP47-203ENST00000399455 PHGDHO43175 533 aaKnown RBP7.89□□□□□ -1.15
USP47-203ENST00000399455 COQ9O75208 318 aa7.89□□□□□ -1.15
USP47-203ENST00000399455 NQO1P15559 274 aaKnown RBP7.89□□□□□ -1.15
USP47-203ENST00000399455 PECAM1P16284 738 aaPredicted RBP7.89□□□□□ -1.15
USP47-203ENST00000399455 SDHBP21912 280 aa7.89□□□□□ -1.15
USP47-203ENST00000399455 SLC7A2P52569 658 aa7.89□□□□□ -1.15
USP47-203ENST00000399455 MAPK12P53778 367 aa7.89□□□□□ -1.15
USP47-203ENST00000399455 PER3P56645 1201 aa7.89□□□□□ -1.15
USP47-203ENST00000399455 SAMD4BQ5PRF9 694 aaKnown RBP7.89□□□□□ -1.15
USP47-203ENST00000399455 CDCA2Q69YH5 1023 aaPredicted RBP7.89□□□□□ -1.15
USP47-203ENST00000399455 PMF1Q6P1K2 205 aa7.89□□□□□ -1.15
USP47-203ENST00000399455 ZCCHC12Q6PEW1 402 aa7.89□□□□□ -1.15
USP47-203ENST00000399455 BBS12Q6ZW61 710 aa7.89□□□□□ -1.15
USP47-203ENST00000399455 OAFQ86UD1 273 aa7.89□□□□□ -1.15
USP47-203ENST00000399455 TDHQ8IZJ6 230 aa7.89□□□□□ -1.15
USP47-203ENST00000399455 GALNT4Q8N4A0 578 aa7.89□□□□□ -1.15
USP47-203ENST00000399455 KYQ8NBH2 561 aa7.89□□□□□ -1.15
USP47-203ENST00000399455 ZMIZ2Q8NF64 920 aa7.89□□□□□ -1.15
USP47-203ENST00000399455 OR2W6PQ8NHA6 318 aa7.89□□□□□ -1.15
USP47-203ENST00000399455 HIC2Q96JB3 615 aa7.89□□□□□ -1.15
USP47-203ENST00000399455 HIST1H2AAQ96QV6 131 aa7.89□□□□□ -1.15
USP47-203ENST00000399455 FAM20BO75063 409 aa7.88□□□□□ -1.15
USP47-203ENST00000399455 PDHA1P08559 390 aa7.88□□□□□ -1.15
USP47-203ENST00000399455 PTGER3P43115 390 aa7.88□□□□□ -1.15
USP47-203ENST00000399455 RABIFP47224 123 aa7.88□□□□□ -1.15
USP47-203ENST00000399455 SUOXP51687 545 aa7.88□□□□□ -1.15
USP47-203ENST00000399455 PGDP52209 483 aa7.88□□□□□ -1.15
USP47-203ENST00000399455 HNRNPKP61978 463 aaKnown RBP eCLIP7.88□□□□□ -1.15
USP47-203ENST00000399455 DSC2Q02487 901 aa7.88□□□□□ -1.15
USP47-203ENST00000399455 PRKG2Q13237 762 aa7.88□□□□□ -1.15
USP47-203ENST00000399455 SPDYCQ5MJ68 293 aa7.88□□□□□ -1.15
USP47-203ENST00000399455 TEX47Q8TBZ9 253 aa7.88□□□□□ -1.15
USP47-203ENST00000399455 NEK7Q8TDX7 302 aa7.88□□□□□ -1.15
USP47-203ENST00000399455 TTYH3Q9C0H2 523 aa7.88□□□□□ -1.15
USP47-203ENST00000399455 DNAJC18Q9H819 358 aa7.88□□□□□ -1.15
USP47-203ENST00000399455 POLR3BQ9NW08 1133 aaPredicted RBP7.88□□□□□ -1.15
USP47-203ENST00000399455 AGPSO00116 658 aa7.88□□□□□ -1.15
USP47-203ENST00000399455 ZNF865P0CJ78 1059 aaPredicted RBP7.88□□□□□ -1.15
USP47-203ENST00000399455 TPSB2P20231 275 aa7.88□□□□□ -1.15
USP47-203ENST00000399455 KRR1Q13601 381 aaKnown RBP7.88□□□□□ -1.15
USP47-203ENST00000399455 TPSAB1Q15661 275 aa7.88□□□□□ -1.15
USP47-203ENST00000399455 TMC3Q7Z5M5 1100 aa7.88□□□□□ -1.15
USP47-203ENST00000399455 RNF168Q8IYW5 571 aaPredicted RBP7.88□□□□□ -1.15
USP47-203ENST00000399455 SVOPQ8N4V2 548 aa7.88□□□□□ -1.15
USP47-203ENST00000399455 ATP6V1C2Q8NEY4 427 aa7.88□□□□□ -1.15
USP47-203ENST00000399455 SEMA4DQ92854 862 aa7.88□□□□□ -1.15
USP47-203ENST00000399455 SERHL2Q9H4I8 314 aa7.88□□□□□ -1.15
USP47-203ENST00000399455 PIF1Q9H611 641 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms