RNA–Protein interactions for RNA: ENST00000398452.6

SKA1-202, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKA1, Length 979 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-202ENST00000398452 SEPT7Q16181 437 aaKnown RBP14.09□□□□□ -0.15
SKA1-202ENST00000398452 ATP13A5Q4VNC0 1218 aa14.09□□□□□ -0.15
SKA1-202ENST00000398452 USP39Q53GS9 565 aaKnown RBP14.09□□□□□ -0.15
SKA1-202ENST00000398452 TAF1BQ53T94 588 aaPredicted RBP14.09□□□□□ -0.15
SKA1-202ENST00000398452 HENMT1Q5T8I9 393 aaKnown RBP14.09□□□□□ -0.15
SKA1-202ENST00000398452 SEL1L3Q68CR1 1132 aa14.09□□□□□ -0.15
SKA1-202ENST00000398452 PTRHD1Q6GMV3 140 aaKnown RBP14.09□□□□□ -0.15
SKA1-202ENST00000398452 UGT3A1Q6NUS8 523 aa14.09□□□□□ -0.15
SKA1-202ENST00000398452 ZC3HC1Q86WB0 502 aaKnown RBP14.09□□□□□ -0.15
SKA1-202ENST00000398452 TOE1Q96GM8 510 aaKnown RBP14.09□□□□□ -0.15
SKA1-202ENST00000398452 CABS1Q96KC9 395 aa14.09□□□□□ -0.15
SKA1-202ENST00000398452 VPS35Q96QK1 796 aa14.09□□□□□ -0.15
SKA1-202ENST00000398452 SH3GL2Q99962 352 aa14.09□□□□□ -0.15
SKA1-202ENST00000398452 SMOXQ9NWM0 555 aa14.09□□□□□ -0.15
SKA1-202ENST00000398452 SLC39A10Q9ULF5 831 aa14.09□□□□□ -0.15
SKA1-202ENST00000398452 R4GN57 208 aa14.09□□□□□ -0.15
SKA1-202ENST00000398452 EP300Q09472 2414 aaPredicted RBP14.08□□□□□ -0.16
SKA1-202ENST00000398452 VPS26AO75436 327 aa14.08□□□□□ -0.16
SKA1-202ENST00000398452 RHOBTB1O94844 696 aa14.08□□□□□ -0.16
SKA1-202ENST00000398452 S1PR4O95977 384 aa14.08□□□□□ -0.16
SKA1-202ENST00000398452 PAK4O96013 591 aaPredicted RBP14.08□□□□□ -0.16
SKA1-202ENST00000398452 IGLV3-19P01714 112 aa14.08□□□□□ -0.16
SKA1-202ENST00000398452 ESR1P03372 595 aa14.08□□□□□ -0.16
SKA1-202ENST00000398452 OR56A5P0C7T3 313 aa14.08□□□□□ -0.16
SKA1-202ENST00000398452 PKMP14618 531 aaKnown RBP14.08□□□□□ -0.16
SKA1-202ENST00000398452 STMN1P16949 149 aa14.08□□□□□ -0.16
SKA1-202ENST00000398452 GCAP28676 217 aa14.08□□□□□ -0.16
SKA1-202ENST00000398452 MAT2AP31153 395 aaKnown RBP14.08□□□□□ -0.16
SKA1-202ENST00000398452 FMO4P31512 558 aa14.08□□□□□ -0.16
SKA1-202ENST00000398452 AKT2P31751 481 aa14.08□□□□□ -0.16
SKA1-202ENST00000398452 ACSL1P33121 698 aa14.08□□□□□ -0.16
SKA1-202ENST00000398452 NBL1P41271 181 aa14.08□□□□□ -0.16
SKA1-202ENST00000398452 POU4F1Q01851 419 aa14.08□□□□□ -0.16
SKA1-202ENST00000398452 BMPR2Q13873 1038 aa14.08□□□□□ -0.16
SKA1-202ENST00000398452 AGERQ15109 404 aa14.08□□□□□ -0.16
SKA1-202ENST00000398452 DBN1Q16643 649 aa14.08□□□□□ -0.16
SKA1-202ENST00000398452 GPRC6AQ5T6X5 926 aa14.08□□□□□ -0.16
SKA1-202ENST00000398452 KCTD16Q68DU8 428 aa14.08□□□□□ -0.16
SKA1-202ENST00000398452 CNSTQ6PJW8 725 aa14.08□□□□□ -0.16
SKA1-202ENST00000398452 SLC36A4Q6YBV0 504 aa14.08□□□□□ -0.16
SKA1-202ENST00000398452 RFLNAQ6ZTI6 216 aa14.08□□□□□ -0.16
SKA1-202ENST00000398452 TRIM69Q86WT6 500 aa14.08□□□□□ -0.16
SKA1-202ENST00000398452 SRRM1Q8IYB3 904 aaKnown RBP14.08□□□□□ -0.16
SKA1-202ENST00000398452 ARFGAP2Q8N6H7 521 aa14.08□□□□□ -0.16
SKA1-202ENST00000398452 BTN2A2Q8WVV5 523 aa14.08□□□□□ -0.16
SKA1-202ENST00000398452 ASB12Q8WXK4 309 aa14.08□□□□□ -0.16
SKA1-202ENST00000398452 KLK6Q92876 244 aa14.08□□□□□ -0.16
SKA1-202ENST00000398452 GLYATL1Q969I3 302 aa14.08□□□□□ -0.16
SKA1-202ENST00000398452 ALKBH8Q96BT7 664 aaKnown RBP14.08□□□□□ -0.16
SKA1-202ENST00000398452 PANX3Q96QZ0 392 aa14.08□□□□□ -0.16
SKA1-202ENST00000398452 C1QTNF2Q9BXJ5 285 aa14.08□□□□□ -0.16
SKA1-202ENST00000398452 PHPT1Q9NRX4 125 aaPredicted RBP14.08□□□□□ -0.16
SKA1-202ENST00000398452 EBF1Q9UH73 591 aa14.08□□□□□ -0.16
SKA1-202ENST00000398452 MYLKQ15746 1914 aa14.07□□□□□ -0.16
SKA1-202ENST00000398452 TRBV5-4A0A0C4DH59 114 aa14.07□□□□□ -0.16
SKA1-202ENST00000398452 FPGTO14772 594 aa14.07□□□□□ -0.16
SKA1-202ENST00000398452 INPP4BO15327 924 aa14.07□□□□□ -0.16
SKA1-202ENST00000398452 SLC31A1O15431 190 aa14.07□□□□□ -0.16
SKA1-202ENST00000398452 FSBPO95073 299 aa14.07□□□□□ -0.16
SKA1-202ENST00000398452 ASMTLO95671 621 aa14.07□□□□□ -0.16
SKA1-202ENST00000398452 MPOP05164 745 aa14.07□□□□□ -0.16
SKA1-202ENST00000398452 PRSS56P0CW18 603 aa14.07□□□□□ -0.16
SKA1-202ENST00000398452 CHRM3P20309 590 aa14.07□□□□□ -0.16
SKA1-202ENST00000398452 RPS3P23396 243 aaKnown RBP eCLIP14.07□□□□□ -0.16
SKA1-202ENST00000398452 CRABP2P29373 138 aa14.07□□□□□ -0.16
SKA1-202ENST00000398452 ABCG1P45844 678 aa14.07□□□□□ -0.16
SKA1-202ENST00000398452 CDKN1CP49918 316 aaPredicted RBP14.07□□□□□ -0.16
SKA1-202ENST00000398452 MAGOHP61326 146 aaKnown RBP14.07□□□□□ -0.16
SKA1-202ENST00000398452 SEMA3AQ14563 771 aa14.07□□□□□ -0.16
SKA1-202ENST00000398452 HECTD2Q5U5R9 776 aa14.07□□□□□ -0.16
SKA1-202ENST00000398452 KIAA0895LQ68EN5 471 aa14.07□□□□□ -0.16
SKA1-202ENST00000398452 PNCKQ6P2M8 343 aa14.07□□□□□ -0.16
SKA1-202ENST00000398452 CCDC91Q7Z6B0 441 aa14.07□□□□□ -0.16
SKA1-202ENST00000398452 PIANPQ8IYJ0 282 aa14.07□□□□□ -0.16
SKA1-202ENST00000398452 DCLK2Q8N568 766 aa14.07□□□□□ -0.16
SKA1-202ENST00000398452 DENND6BQ8NEG7 585 aa14.07□□□□□ -0.16
SKA1-202ENST00000398452 ACMSDQ8TDX5 336 aa14.07□□□□□ -0.16
SKA1-202ENST00000398452 SNX19Q92543 992 aa14.07□□□□□ -0.16
SKA1-202ENST00000398452 LPGAT1Q92604 370 aa14.07□□□□□ -0.16
SKA1-202ENST00000398452 ARL8AQ96BM9 186 aa14.07□□□□□ -0.16
SKA1-202ENST00000398452 GPR22Q99680 433 aa14.07□□□□□ -0.16
SKA1-202ENST00000398452 GPR174Q9BXC1 333 aa14.07□□□□□ -0.16
SKA1-202ENST00000398452 WDR26Q9H7D7 661 aa14.07□□□□□ -0.16
SKA1-202ENST00000398452 KCNK9Q9NPC2 374 aa14.07□□□□□ -0.16
SKA1-202ENST00000398452 WSB2Q9NYS7 404 aaPredicted RBP14.07□□□□□ -0.16
SKA1-202ENST00000398452 TAS2R13Q9NYV9 303 aa14.07□□□□□ -0.16
SKA1-202ENST00000398452 MTO1Q9Y2Z2 717 aaKnown RBP14.07□□□□□ -0.16
SKA1-202ENST00000398452 VWA7Q9Y334 891 aa14.07□□□□□ -0.16
SKA1-202ENST00000398452 ACTL7BQ9Y614 415 aa14.07□□□□□ -0.16
SKA1-202ENST00000398452 AGAP14A8MT82 685 aa14.06□□□□□ -0.16
SKA1-202ENST00000398452 PROB1E7EW31 1015 aa14.06□□□□□ -0.16
SKA1-202ENST00000398452 CACNB4O00305 520 aaPredicted RBP14.06□□□□□ -0.16
SKA1-202ENST00000398452 GAPDHSO14556 408 aaPredicted RBP14.06□□□□□ -0.16
SKA1-202ENST00000398452 TPP1O14773 563 aa14.06□□□□□ -0.16
SKA1-202ENST00000398452 AP2A2O94973 939 aa14.06□□□□□ -0.16
SKA1-202ENST00000398452 SYF2O95926 243 aaKnown RBP14.06□□□□□ -0.16
SKA1-202ENST00000398452 KRT4P19013 534 aa14.06□□□□□ -0.16
SKA1-202ENST00000398452 HNRNPA2B1P22626 353 aaKnown RBP14.06□□□□□ -0.16
SKA1-202ENST00000398452 TEAD1P28347 426 aa14.06□□□□□ -0.16
SKA1-202ENST00000398452 CCT5P48643 541 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms