RNA–Protein interactions for RNA: ENST00000398043.2

APTR-201, Transcript of Alu-mediated CDKN1A/p21 transcriptional regulator, humanhuman

TSL 1 (best)

Gene APTR, Length 528 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTR-201ENST00000398043 C11orf96Q7Z7L8 435 aa16.5■□□□□ 0.23
APTR-201ENST00000398043 GLIS1Q8NBF1 620 aa16.5■□□□□ 0.23
APTR-201ENST00000398043 LRRC40Q9H9A6 602 aa16.5■□□□□ 0.23
APTR-201ENST00000398043 UGT1A7Q9HAW7 530 aa16.5■□□□□ 0.23
APTR-201ENST00000398043 UGT1A10Q9HAW8 530 aa16.5■□□□□ 0.23
APTR-201ENST00000398043 UGT1A8Q9HAW9 530 aa16.5■□□□□ 0.23
APTR-201ENST00000398043 SMOXQ9NWM0 555 aa16.5■□□□□ 0.23
APTR-201ENST00000398043 TBC1D29Q9UFV1 150 aa16.5■□□□□ 0.23
APTR-201ENST00000398043 SLC23A2Q9UGH3 650 aa16.5■□□□□ 0.23
APTR-201ENST00000398043 ZKSCAN5Q9Y2L8 839 aa16.5■□□□□ 0.23
APTR-201ENST00000398043 PKP3Q9Y446 797 aa16.5■□□□□ 0.23
APTR-201ENST00000398043 GLYATL1P3A0A0U1RQE8 302 aa16.49■□□□□ 0.23
APTR-201ENST00000398043 SRRM3A6NNA2 597 aaPredicted RBP16.49■□□□□ 0.23
APTR-201ENST00000398043 PPM1DO15297 605 aa16.49■□□□□ 0.23
APTR-201ENST00000398043 STX7O15400 261 aaKnown RBP16.49■□□□□ 0.23
APTR-201ENST00000398043 B4GAT1O43505 415 aa16.49■□□□□ 0.23
APTR-201ENST00000398043 FGGP02679 453 aa16.49■□□□□ 0.23
APTR-201ENST00000398043 ACP5P13686 325 aa16.49■□□□□ 0.23
APTR-201ENST00000398043 ETS1P14921 441 aa16.49■□□□□ 0.23
APTR-201ENST00000398043 PSMA3P25788 255 aa16.49■□□□□ 0.23
APTR-201ENST00000398043 CXCR5P32302 372 aa16.49■□□□□ 0.23
APTR-201ENST00000398043 SNX1Q13596 522 aa16.49■□□□□ 0.23
APTR-201ENST00000398043 PEX6Q13608 980 aa16.49■□□□□ 0.23
APTR-201ENST00000398043 PRUNE1Q86TP1 453 aa16.49■□□□□ 0.23
APTR-201ENST00000398043 CCNJLQ8IV13 435 aa16.49■□□□□ 0.23
APTR-201ENST00000398043 SFRP1Q8N474 314 aa16.49■□□□□ 0.23
APTR-201ENST00000398043 DDHD1Q8NEL9 900 aa16.49■□□□□ 0.23
APTR-201ENST00000398043 OR4K2Q8NGD2 314 aa16.49■□□□□ 0.23
APTR-201ENST00000398043 OR13C4Q8NGS5 318 aa16.49■□□□□ 0.23
APTR-201ENST00000398043 GRAMD1AQ96CP6 724 aa16.49■□□□□ 0.23
APTR-201ENST00000398043 NXPE2Q96DL1 559 aa16.49■□□□□ 0.23
APTR-201ENST00000398043 LRRN3Q9H3W5 708 aa16.49■□□□□ 0.23
APTR-201ENST00000398043 ETNK1Q9HBU6 452 aa16.49■□□□□ 0.23
APTR-201ENST00000398043 ZNF148Q9UQR1 794 aa16.49■□□□□ 0.23
APTR-201ENST00000398043 DRG1Q9Y295 367 aaKnown RBP16.49■□□□□ 0.23
APTR-201ENST00000398043 DSPP15924 2871 aaKnown RBP16.48■□□□□ 0.23
APTR-201ENST00000398043 C2orf81A6NN90 581 aa16.48■□□□□ 0.23
APTR-201ENST00000398043 D6RAR5 112 aa16.48■□□□□ 0.23
APTR-201ENST00000398043 PSMD3O43242 534 aa16.48■□□□□ 0.23
APTR-201ENST00000398043 SUN1O94901 812 aa16.48■□□□□ 0.23
APTR-201ENST00000398043 RPLP0P05388 317 aaKnown RBP16.48■□□□□ 0.23
APTR-201ENST00000398043 FASLGP48023 281 aa16.48■□□□□ 0.23
APTR-201ENST00000398043 TMEM115Q12893 351 aaPredicted RBP16.48■□□□□ 0.23
APTR-201ENST00000398043 SPIDRQ14159 915 aa16.48■□□□□ 0.23
APTR-201ENST00000398043 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.48■□□□□ 0.23
APTR-201ENST00000398043 IYDQ6PHW0 289 aa16.48■□□□□ 0.23
APTR-201ENST00000398043 TMPRSS9Q7Z410 1059 aa16.48■□□□□ 0.23
APTR-201ENST00000398043 RASGEF1CQ8N431 466 aa16.48■□□□□ 0.23
APTR-201ENST00000398043 TAB3Q8N5C8 712 aaPredicted RBP16.48■□□□□ 0.23
APTR-201ENST00000398043 ATXN7L3BQ96GX2 97 aa16.48■□□□□ 0.23
APTR-201ENST00000398043 FKBPLQ9UIM3 349 aa16.48■□□□□ 0.23
APTR-201ENST00000398043 KCNK6Q9Y257 313 aa16.48■□□□□ 0.23
APTR-201ENST00000398043 JRKLQ9Y4A0 524 aa16.48■□□□□ 0.23
APTR-201ENST00000398043 ERI2A8K979 691 aaKnown RBP16.47■□□□□ 0.23
APTR-201ENST00000398043 KMOO15229 486 aa16.47■□□□□ 0.23
APTR-201ENST00000398043 CEP104O60308 925 aa16.47■□□□□ 0.23
APTR-201ENST00000398043 SRP72O76094 671 aaKnown RBP16.47■□□□□ 0.23
APTR-201ENST00000398043 CDK14O94921 469 aa16.47■□□□□ 0.23
APTR-201ENST00000398043 PRAMEF1O95521 474 aa16.47■□□□□ 0.23
APTR-201ENST00000398043 CRTAMO95727 393 aa16.47■□□□□ 0.23
APTR-201ENST00000398043 ZNF7P17097 686 aaPredicted RBP16.47■□□□□ 0.23
APTR-201ENST00000398043 TPH1P17752 444 aa16.47■□□□□ 0.23
APTR-201ENST00000398043 FDFT1P37268 417 aa16.47■□□□□ 0.23
APTR-201ENST00000398043 GPR3P46089 330 aa16.47■□□□□ 0.23
APTR-201ENST00000398043 PDE1BQ01064 536 aa16.47■□□□□ 0.23
APTR-201ENST00000398043 ZFP36L1Q07352 338 aaKnown RBP16.47■□□□□ 0.23
APTR-201ENST00000398043 SEMA5AQ13591 1074 aa16.47■□□□□ 0.23
APTR-201ENST00000398043 ITGA9Q13797 1035 aa16.47■□□□□ 0.23
APTR-201ENST00000398043 LDLRAP1Q5SW96 308 aa16.47■□□□□ 0.23
APTR-201ENST00000398043 GPRC6AQ5T6X5 926 aa16.47■□□□□ 0.23
APTR-201ENST00000398043 CRTC3Q6UUV7 619 aa16.47■□□□□ 0.23
APTR-201ENST00000398043 B3GNT8Q7Z7M8 397 aa16.47■□□□□ 0.23
APTR-201ENST00000398043 LRRTM4Q86VH4 590 aa16.47■□□□□ 0.23
APTR-201ENST00000398043 PRELID2Q8N945 189 aa16.47■□□□□ 0.23
APTR-201ENST00000398043 RASGEF1AQ8N9B8 481 aa16.47■□□□□ 0.23
APTR-201ENST00000398043 Q8N9G6 341 aaPredicted RBP16.47■□□□□ 0.23
APTR-201ENST00000398043 ZNF398Q8TD17 642 aa16.47■□□□□ 0.23
APTR-201ENST00000398043 SLC37A2Q8TED4 501 aa16.47■□□□□ 0.23
APTR-201ENST00000398043 PRR11Q96HE9 360 aaPredicted RBP16.47■□□□□ 0.23
APTR-201ENST00000398043 GFM1Q96RP9 751 aaKnown RBP16.47■□□□□ 0.23
APTR-201ENST00000398043 TIMM29Q9BSF4 260 aa16.47■□□□□ 0.23
APTR-201ENST00000398043 PTPRQQ9UMZ3 2332 aa16.47■□□□□ 0.23
APTR-201ENST00000398043 AHCTF1Q8WYP5 2266 aa16.47■□□□□ 0.23
APTR-201ENST00000398043 MROH6A6NGR9 719 aa16.46■□□□□ 0.23
APTR-201ENST00000398043 H7C0S8 307 aa16.46■□□□□ 0.23
APTR-201ENST00000398043 DXOO77932 396 aaKnown RBP16.46■□□□□ 0.23
APTR-201ENST00000398043 IFNB1P01574 187 aa16.46■□□□□ 0.23
APTR-201ENST00000398043 ZSCAN5DPP0CG00 497 aa16.46■□□□□ 0.23
APTR-201ENST00000398043 F3P13726 295 aa16.46■□□□□ 0.23
APTR-201ENST00000398043 RPL22P35268 128 aaKnown RBP16.46■□□□□ 0.23
APTR-201ENST00000398043 GRIA1P42261 906 aa16.46■□□□□ 0.23
APTR-201ENST00000398043 LSSP48449 732 aa16.46■□□□□ 0.23
APTR-201ENST00000398043 CTSCP53634 463 aa16.46■□□□□ 0.23
APTR-201ENST00000398043 OR1D5P58170 312 aa16.46■□□□□ 0.23
APTR-201ENST00000398043 NFATC2Q13469 925 aa16.46■□□□□ 0.23
APTR-201ENST00000398043 SQSTM1Q13501 440 aa16.46■□□□□ 0.23
APTR-201ENST00000398043 IGF2-ASQ6U949 168 aa16.46■□□□□ 0.23
APTR-201ENST00000398043 MICALCLQ6ZW33 695 aa16.46■□□□□ 0.23
APTR-201ENST00000398043 MAIP1Q8WWC4 291 aa16.46■□□□□ 0.23
APTR-201ENST00000398043 KLC4Q9NSK0 619 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms