RNA–Protein interactions for RNA: ENST00000398022.6

TM9SF4-202, Transcript of transmembrane 9 superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF4, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-202ENST00000398022 SMAD9O15198 467 aaKnown RBP6.55□□□□□ -1.36
TM9SF4-202ENST00000398022 SCO2O43819 266 aa6.55□□□□□ -1.36
TM9SF4-202ENST00000398022 MAGEC1O60732 1142 aa6.55□□□□□ -1.36
TM9SF4-202ENST00000398022 LYPLA2O95372 231 aa6.55□□□□□ -1.36
TM9SF4-202ENST00000398022 GH1P01241 217 aa6.55□□□□□ -1.36
TM9SF4-202ENST00000398022 FABP1P07148 127 aa6.55□□□□□ -1.36
TM9SF4-202ENST00000398022 RCVRNP35243 200 aa6.55□□□□□ -1.36
TM9SF4-202ENST00000398022 SLC18A1P54219 525 aa6.55□□□□□ -1.36
TM9SF4-202ENST00000398022 RPL10AP62906 217 aaKnown RBP6.55□□□□□ -1.36
TM9SF4-202ENST00000398022 ZNF568Q3ZCX4 644 aa6.55□□□□□ -1.36
TM9SF4-202ENST00000398022 TMEM63BQ5T3F8 832 aa6.55□□□□□ -1.36
TM9SF4-202ENST00000398022 ASRGL1Q7L266 308 aa6.55□□□□□ -1.36
TM9SF4-202ENST00000398022 CHST15Q7LFX5 561 aaPredicted RBP6.55□□□□□ -1.36
TM9SF4-202ENST00000398022 TAC4Q86UU9 113 aa6.55□□□□□ -1.36
TM9SF4-202ENST00000398022 ECHDC2Q86YB7 292 aa6.55□□□□□ -1.36
TM9SF4-202ENST00000398022 KATNAL2Q8IYT4 538 aa6.55□□□□□ -1.36
TM9SF4-202ENST00000398022 KRT78Q8N1N4 520 aa6.55□□□□□ -1.36
TM9SF4-202ENST00000398022 HDDC3Q8N4P3 179 aa6.55□□□□□ -1.36
TM9SF4-202ENST00000398022 OR8J2Q8NGG1 315 aa6.55□□□□□ -1.36
TM9SF4-202ENST00000398022 TAS1R2Q8TE23 839 aa6.55□□□□□ -1.36
TM9SF4-202ENST00000398022 SLC13A3Q8WWT9 602 aa6.55□□□□□ -1.36
TM9SF4-202ENST00000398022 NANOS1Q8WY41 292 aaKnown RBP6.55□□□□□ -1.36
TM9SF4-202ENST00000398022 TAMM41Q96BW9 452 aa6.55□□□□□ -1.36
TM9SF4-202ENST00000398022 UNC93B1Q9H1C4 597 aa6.55□□□□□ -1.36
TM9SF4-202ENST00000398022 RNPEPL1Q9HAU8 725 aa6.55□□□□□ -1.36
TM9SF4-202ENST00000398022 MRPS30Q9NP92 439 aaKnown RBP6.55□□□□□ -1.36
TM9SF4-202ENST00000398022 ACP6Q9NPH0 428 aa6.55□□□□□ -1.36
TM9SF4-202ENST00000398022 UFSP2Q9NUQ7 469 aa6.55□□□□□ -1.36
TM9SF4-202ENST00000398022 WRAP73Q9P2S5 460 aaPredicted RBP6.55□□□□□ -1.36
TM9SF4-202ENST00000398022 ZNRF3Q9ULT6 936 aa6.55□□□□□ -1.36
TM9SF4-202ENST00000398022 PCDHGC3Q9UN70 934 aa6.55□□□□□ -1.36
TM9SF4-202ENST00000398022 EIF3LQ9Y262 564 aaKnown RBP6.55□□□□□ -1.36
TM9SF4-202ENST00000398022 NEU2Q9Y3R4 380 aa6.55□□□□□ -1.36
TM9SF4-202ENST00000398022 DENND3A2RUS2 1198 aa6.55□□□□□ -1.36
TM9SF4-202ENST00000398022 LCHNA4D1U4 455 aa6.55□□□□□ -1.36
TM9SF4-202ENST00000398022 CCRL2O00421 344 aa6.55□□□□□ -1.36
TM9SF4-202ENST00000398022 PRPF4O43172 522 aaKnown RBP eCLIP6.55□□□□□ -1.36
TM9SF4-202ENST00000398022 B4GAT1O43505 415 aa6.55□□□□□ -1.36
TM9SF4-202ENST00000398022 SPAG7O75391 227 aa6.55□□□□□ -1.36
TM9SF4-202ENST00000398022 HK1P19367 917 aa6.55□□□□□ -1.36
TM9SF4-202ENST00000398022 SFNP31947 248 aa6.55□□□□□ -1.36
TM9SF4-202ENST00000398022 SLC26A2P50443 739 aa6.55□□□□□ -1.36
TM9SF4-202ENST00000398022 WASHC2DQ5SRD0 308 aa6.55□□□□□ -1.36
TM9SF4-202ENST00000398022 UBAP2Q5T6F2 1119 aaKnown RBP6.55□□□□□ -1.36
TM9SF4-202ENST00000398022 NIPAL1Q6NVV3 410 aa6.55□□□□□ -1.36
TM9SF4-202ENST00000398022 ARMCX2Q7L311 632 aa6.55□□□□□ -1.36
TM9SF4-202ENST00000398022 TAS2R42Q7RTR8 314 aa6.55□□□□□ -1.36
TM9SF4-202ENST00000398022 TRMT1LQ7Z2T5 733 aaKnown RBP6.55□□□□□ -1.36
TM9SF4-202ENST00000398022 SETD3Q86TU7 594 aaPredicted RBP6.55□□□□□ -1.36
TM9SF4-202ENST00000398022 TRABD2AQ86V40 505 aa6.55□□□□□ -1.36
TM9SF4-202ENST00000398022 TDRPQ86YL5 185 aa6.55□□□□□ -1.36
TM9SF4-202ENST00000398022 RCOR2Q8IZ40 523 aa6.55□□□□□ -1.36
TM9SF4-202ENST00000398022 GPD1LQ8N335 351 aa6.55□□□□□ -1.36
TM9SF4-202ENST00000398022 GTF3AQ92664 365 aaKnown RBP6.55□□□□□ -1.36
TM9SF4-202ENST00000398022 ZNF558Q96NG5 402 aa6.55□□□□□ -1.36
TM9SF4-202ENST00000398022 NOL6Q9H6R4 1146 aaKnown RBP6.55□□□□□ -1.36
TM9SF4-202ENST00000398022 AGO3Q9H9G7 860 aaKnown RBP6.55□□□□□ -1.36
TM9SF4-202ENST00000398022 C17orf75Q9HAS0 396 aa6.55□□□□□ -1.36
TM9SF4-202ENST00000398022 TBC1D23Q9NUY8 699 aa6.55□□□□□ -1.36
TM9SF4-202ENST00000398022 SPASTQ9UBP0 616 aa6.55□□□□□ -1.36
TM9SF4-202ENST00000398022 SLC24A2Q9UI40 661 aa6.55□□□□□ -1.36
TM9SF4-202ENST00000398022 ZFP69BQ9UJL9 534 aa6.55□□□□□ -1.36
TM9SF4-202ENST00000398022 RBMX2Q9Y388 322 aaKnown RBP6.55□□□□□ -1.36
TM9SF4-202ENST00000398022 IQCF5A8MTL0 148 aa6.55□□□□□ -1.36
TM9SF4-202ENST00000398022 LINC00587B1AMM8 73 aa6.55□□□□□ -1.36
TM9SF4-202ENST00000398022 WDR64B1ANS9 1081 aa6.55□□□□□ -1.36
TM9SF4-202ENST00000398022 F5H0A9 414 aaPredicted RBP6.55□□□□□ -1.36
TM9SF4-202ENST00000398022 DNALI1O14645 258 aaPredicted RBP6.55□□□□□ -1.36
TM9SF4-202ENST00000398022 AIM2O14862 343 aa6.55□□□□□ -1.36
TM9SF4-202ENST00000398022 GPR182O15218 404 aa6.55□□□□□ -1.36
TM9SF4-202ENST00000398022 MAGEB2O15479 319 aa6.55□□□□□ -1.36
TM9SF4-202ENST00000398022 GMFGO60234 142 aa6.55□□□□□ -1.36
TM9SF4-202ENST00000398022 CDK14O94921 469 aa6.55□□□□□ -1.36
TM9SF4-202ENST00000398022 ZWINTO95229 277 aa6.55□□□□□ -1.36
TM9SF4-202ENST00000398022 NSA2O95478 260 aaKnown RBP6.55□□□□□ -1.36
TM9SF4-202ENST00000398022 CST3P01034 146 aaPredicted RBP6.55□□□□□ -1.36
TM9SF4-202ENST00000398022 SPATA31D3P0C874 917 aa6.55□□□□□ -1.36
TM9SF4-202ENST00000398022 TNNI1P19237 187 aa6.55□□□□□ -1.36
TM9SF4-202ENST00000398022 IVDP26440 423 aa6.55□□□□□ -1.36
TM9SF4-202ENST00000398022 AKT1P31749 480 aa6.55□□□□□ -1.36
TM9SF4-202ENST00000398022 SERPINB5P36952 375 aa6.55□□□□□ -1.36
TM9SF4-202ENST00000398022 RAD23BP54727 409 aa6.55□□□□□ -1.36
TM9SF4-202ENST00000398022 NCKAP1LP55160 1127 aa6.55□□□□□ -1.36
TM9SF4-202ENST00000398022 MAP4K2Q12851 820 aa6.55□□□□□ -1.36
TM9SF4-202ENST00000398022 PEX6Q13608 980 aa6.55□□□□□ -1.36
TM9SF4-202ENST00000398022 PTPRRQ15256 657 aa6.55□□□□□ -1.36
TM9SF4-202ENST00000398022 YIF1BQ5BJH7 314 aa6.55□□□□□ -1.36
TM9SF4-202ENST00000398022 C1orf220Q5T0J3 134 aa6.55□□□□□ -1.36
TM9SF4-202ENST00000398022 MTFR2Q6P444 385 aa6.55□□□□□ -1.36
TM9SF4-202ENST00000398022 PKN3Q6P5Z2 889 aa6.55□□□□□ -1.36
TM9SF4-202ENST00000398022 SPATA31D4Q6ZUB0 917 aa6.55□□□□□ -1.36
TM9SF4-202ENST00000398022 SV2AQ7L0J3 742 aa6.55□□□□□ -1.36
TM9SF4-202ENST00000398022 C4orf19Q8IY42 314 aa6.55□□□□□ -1.36
TM9SF4-202ENST00000398022 THNSL1Q8IYQ7 743 aa6.55□□□□□ -1.36
TM9SF4-202ENST00000398022 CELF5Q8N6W0 485 aaKnown RBP6.55□□□□□ -1.36
TM9SF4-202ENST00000398022 ZNF398Q8TD17 642 aa6.55□□□□□ -1.36
TM9SF4-202ENST00000398022 LIPHQ8WWY8 451 aa6.55□□□□□ -1.36
TM9SF4-202ENST00000398022 HTR3CQ8WXA8 447 aa6.55□□□□□ -1.36
TM9SF4-202ENST00000398022 SEMA4DQ92854 862 aa6.55□□□□□ -1.36
TM9SF4-202ENST00000398022 ZNF578Q96N58 590 aaPredicted RBP6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms