RNA–Protein interactions for RNA: ENST00000397606.7

PTPRD-204, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 5,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-204ENST00000397606 PON2Q15165 354 aa8.21□□□□□ -1.1
PTPRD-204ENST00000397606 XKR6Q5GH73 641 aa8.21□□□□□ -1.1
PTPRD-204ENST00000397606 SPATA24Q86W54 205 aa8.21□□□□□ -1.1
PTPRD-204ENST00000397606 C10orf107Q8IVU9 208 aa8.21□□□□□ -1.1
PTPRD-204ENST00000397606 ARHGAP12Q8IWW6 846 aa8.21□□□□□ -1.1
PTPRD-204ENST00000397606 TXNDC5Q8NBS9 432 aaKnown RBP8.21□□□□□ -1.1
PTPRD-204ENST00000397606 RAD51AP1Q96B01 352 aa8.21□□□□□ -1.1
PTPRD-204ENST00000397606 RANBP9Q96S59 729 aa8.21□□□□□ -1.1
PTPRD-204ENST00000397606 PCDH12Q9NPG4 1184 aa8.21□□□□□ -1.1
PTPRD-204ENST00000397606 SLC2A6Q9UGQ3 507 aa8.21□□□□□ -1.1
PTPRD-204ENST00000397606 SRRM3A6NNA2 597 aaPredicted RBP8.2□□□□□ -1.1
PTPRD-204ENST00000397606 STK16O75716 305 aa8.2□□□□□ -1.1
PTPRD-204ENST00000397606 ZDHHC11BP0C7U3 371 aa8.2□□□□□ -1.1
PTPRD-204ENST00000397606 C5AR1P21730 350 aa8.2□□□□□ -1.1
PTPRD-204ENST00000397606 SOAT1P35610 550 aa8.2□□□□□ -1.1
PTPRD-204ENST00000397606 HNF1BP35680 557 aa8.2□□□□□ -1.1
PTPRD-204ENST00000397606 RPS21P63220 83 aaKnown RBP8.2□□□□□ -1.1
PTPRD-204ENST00000397606 CYLC2Q14093 348 aaPredicted RBP8.2□□□□□ -1.1
PTPRD-204ENST00000397606 PPM1JQ5JR12 505 aa8.2□□□□□ -1.1
PTPRD-204ENST00000397606 Q6ZVL8 140 aa8.2□□□□□ -1.1
PTPRD-204ENST00000397606 C17orf64Q86WR6 236 aa8.2□□□□□ -1.1
PTPRD-204ENST00000397606 RFWD2Q8NHY2 731 aa8.2□□□□□ -1.1
PTPRD-204ENST00000397606 CCDC124Q96CT7 223 aaKnown RBP8.2□□□□□ -1.1
PTPRD-204ENST00000397606 SH3GL2Q99962 352 aa8.2□□□□□ -1.1
PTPRD-204ENST00000397606 TACO1Q9BSH4 297 aaKnown RBP8.2□□□□□ -1.1
PTPRD-204ENST00000397606 SLC17A7Q9P2U7 560 aa8.2□□□□□ -1.1
PTPRD-204ENST00000397606 COPG2Q9UBF2 871 aa8.2□□□□□ -1.1
PTPRD-204ENST00000397606 CA14Q9ULX7 337 aa8.2□□□□□ -1.1
PTPRD-204ENST00000397606 SCML1Q9UN30 329 aa8.2□□□□□ -1.1
PTPRD-204ENST00000397606 NME7Q9Y5B8 376 aa8.2□□□□□ -1.1
PTPRD-204ENST00000397606 TCRBV21S2A2A0A5A6 115 aa8.2□□□□□ -1.1
PTPRD-204ENST00000397606 GSAPA4D1B5 854 aa8.2□□□□□ -1.1
PTPRD-204ENST00000397606 PRKCHP24723 683 aa8.2□□□□□ -1.1
PTPRD-204ENST00000397606 CCNFP41002 786 aa8.2□□□□□ -1.1
PTPRD-204ENST00000397606 STC1P52823 247 aa8.2□□□□□ -1.1
PTPRD-204ENST00000397606 TRAF2Q12933 501 aa8.2□□□□□ -1.1
PTPRD-204ENST00000397606 CYTH1Q15438 398 aa8.2□□□□□ -1.1
PTPRD-204ENST00000397606 TAZQ16635 292 aa8.2□□□□□ -1.1
PTPRD-204ENST00000397606 PHKG1Q16816 387 aa8.2□□□□□ -1.1
PTPRD-204ENST00000397606 AASDHQ4L235 1098 aaPredicted RBP8.2□□□□□ -1.1
PTPRD-204ENST00000397606 DGKKQ5KSL6 1271 aa8.2□□□□□ -1.1
PTPRD-204ENST00000397606 FAM182AQ5T1J6 154 aa8.2□□□□□ -1.1
PTPRD-204ENST00000397606 NADSYN1Q6IA69 706 aa8.2□□□□□ -1.1
PTPRD-204ENST00000397606 LPCAT2Q7L5N7 544 aa8.2□□□□□ -1.1
PTPRD-204ENST00000397606 LRRTM4Q86VH4 590 aa8.2□□□□□ -1.1
PTPRD-204ENST00000397606 CLYBLQ8N0X4 340 aa8.2□□□□□ -1.1
PTPRD-204ENST00000397606 YY1AP1Q9H869 796 aa8.2□□□□□ -1.1
PTPRD-204ENST00000397606 MAPRE3Q9UPY8 281 aa8.2□□□□□ -1.1
PTPRD-204ENST00000397606 HEBP2Q9Y5Z4 205 aa8.2□□□□□ -1.1
PTPRD-204ENST00000397606 URADA6NGE7 173 aa8.2□□□□□ -1.1
PTPRD-204ENST00000397606 E7ESA3 106 aa8.2□□□□□ -1.1
PTPRD-204ENST00000397606 FANCGO15287 622 aa8.2□□□□□ -1.1
PTPRD-204ENST00000397606 HDAC3O15379 428 aa8.2□□□□□ -1.1
PTPRD-204ENST00000397606 SIN3BO75182 1162 aa8.2□□□□□ -1.1
PTPRD-204ENST00000397606 ATP1B2P14415 290 aaPredicted RBP8.2□□□□□ -1.1
PTPRD-204ENST00000397606 LBPP18428 481 aa8.2□□□□□ -1.1
PTPRD-204ENST00000397606 HOXD9P28356 352 aaPredicted RBP8.2□□□□□ -1.1
PTPRD-204ENST00000397606 HNRNPH2P55795 449 aaKnown RBP8.2□□□□□ -1.1
PTPRD-204ENST00000397606 MCCD1P59942 119 aaPredicted RBP8.2□□□□□ -1.1
PTPRD-204ENST00000397606 CST6Q15828 149 aa8.2□□□□□ -1.1
PTPRD-204ENST00000397606 MFSD4BQ5TF39 518 aa8.2□□□□□ -1.1
PTPRD-204ENST00000397606 MTDHQ86UE4 582 aaKnown RBP8.2□□□□□ -1.1
PTPRD-204ENST00000397606 RALGPS2Q86X27 583 aaPredicted RBP8.2□□□□□ -1.1
PTPRD-204ENST00000397606 CNTD1Q8N815 330 aa8.2□□□□□ -1.1
PTPRD-204ENST00000397606 SIDT2Q8NBJ9 832 aaKnown RBP8.2□□□□□ -1.1
PTPRD-204ENST00000397606 TNIP2Q8NFZ5 429 aa8.2□□□□□ -1.1
PTPRD-204ENST00000397606 DPEP2Q9H4A9 486 aa8.2□□□□□ -1.1
PTPRD-204ENST00000397606 DNAJC11Q9NVH1 559 aa8.2□□□□□ -1.1
PTPRD-204ENST00000397606 INTS7Q9NVH2 962 aaKnown RBP8.2□□□□□ -1.1
PTPRD-204ENST00000397606 SOHLH2Q9NX45 425 aa8.2□□□□□ -1.1
PTPRD-204ENST00000397606 KCTD3Q9Y597 815 aa8.2□□□□□ -1.1
PTPRD-204ENST00000397606 RBBP6Q7Z6E9 1792 aaKnown RBP8.2□□□□□ -1.1
PTPRD-204ENST00000397606 MYO7AQ13402 2215 aa8.2□□□□□ -1.1
PTPRD-204ENST00000397606 CITO14578 2027 aa8.2□□□□□ -1.1
PTPRD-204ENST00000397606 A0A1W2PP55 124 aa8.2□□□□□ -1.1
PTPRD-204ENST00000397606 CAPN8A6NHC0 703 aa8.2□□□□□ -1.1
PTPRD-204ENST00000397606 KLKB1P03952 638 aa8.2□□□□□ -1.1
PTPRD-204ENST00000397606 LAMP2P13473 410 aa8.2□□□□□ -1.1
PTPRD-204ENST00000397606 HOXC13P31276 330 aa8.2□□□□□ -1.1
PTPRD-204ENST00000397606 GPX6P59796 221 aa8.2□□□□□ -1.1
PTPRD-204ENST00000397606 HNRNPA1L2Q32P51 320 aaKnown RBP8.2□□□□□ -1.1
PTPRD-204ENST00000397606 TANGO2Q6ICL3 276 aa8.2□□□□□ -1.1
PTPRD-204ENST00000397606 ENPP7Q6UWV6 458 aa8.2□□□□□ -1.1
PTPRD-204ENST00000397606 CDYL2Q8N8U2 506 aa8.2□□□□□ -1.1
PTPRD-204ENST00000397606 OR2T3Q8NH03 318 aa8.2□□□□□ -1.1
PTPRD-204ENST00000397606 PPP3R2Q96LZ3 170 aa8.2□□□□□ -1.1
PTPRD-204ENST00000397606 SH3GL1Q99961 368 aa8.2□□□□□ -1.1
PTPRD-204ENST00000397606 CARS2Q9HA77 564 aaKnown RBP8.2□□□□□ -1.1
PTPRD-204ENST00000397606 GULP1Q9UBP9 304 aa8.2□□□□□ -1.1
PTPRD-204ENST00000397606 TRAFD1O14545 582 aaPredicted RBP8.19□□□□□ -1.1
PTPRD-204ENST00000397606 AZIN1O14977 448 aa8.19□□□□□ -1.1
PTPRD-204ENST00000397606 PLIN3O60664 434 aa8.19□□□□□ -1.1
PTPRD-204ENST00000397606 PRAMEF12O95522 483 aa8.19□□□□□ -1.1
PTPRD-204ENST00000397606 NUDT2P50583 147 aa8.19□□□□□ -1.1
PTPRD-204ENST00000397606 HPCAP84074 193 aa8.19□□□□□ -1.1
PTPRD-204ENST00000397606 IL1RL1Q01638 556 aa8.19□□□□□ -1.1
PTPRD-204ENST00000397606 CNTN1Q12860 1018 aa8.19□□□□□ -1.1
PTPRD-204ENST00000397606 AGKQ53H12 422 aa8.19□□□□□ -1.1
PTPRD-204ENST00000397606 WDR45BQ5MNZ6 344 aa8.19□□□□□ -1.1
PTPRD-204ENST00000397606 SULT1C3Q6IMI6 304 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms