RNA–Protein interactions for RNA: ENST00000397511.6

SSR1-202, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 3,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-202ENST00000397511 SCIMPQ6UWF3 145 aa5□□□□□ -1.61
SSR1-202ENST00000397511 ABRAXAS1Q6UWZ7 409 aa5□□□□□ -1.61
SSR1-202ENST00000397511 CYS1Q717R9 158 aa5□□□□□ -1.61
SSR1-202ENST00000397511 BHLHA9Q7RTU4 235 aa5□□□□□ -1.61
SSR1-202ENST00000397511 KRT77Q7Z794 578 aa5□□□□□ -1.61
SSR1-202ENST00000397511 CLEC14AQ86T13 490 aa5□□□□□ -1.61
SSR1-202ENST00000397511 SLC51BQ86UW2 128 aa5□□□□□ -1.61
SSR1-202ENST00000397511 IFNEQ86WN2 208 aa5□□□□□ -1.61
SSR1-202ENST00000397511 RALGPS2Q86X27 583 aaPredicted RBP5□□□□□ -1.61
SSR1-202ENST00000397511 ARMC8Q8IUR7 673 aa5□□□□□ -1.61
SSR1-202ENST00000397511 CFAP52Q8N1V2 620 aa5□□□□□ -1.61
SSR1-202ENST00000397511 ZCCHC7Q8N3Z6 543 aaKnown RBP5□□□□□ -1.61
SSR1-202ENST00000397511 TTC9BQ8N6N2 239 aa5□□□□□ -1.61
SSR1-202ENST00000397511 PACRGLQ8N7B6 248 aa5□□□□□ -1.61
SSR1-202ENST00000397511 PPHLN1Q8NEY8 458 aaKnown RBP5□□□□□ -1.61
SSR1-202ENST00000397511 RP9Q8TA86 221 aaKnown RBP5□□□□□ -1.61
SSR1-202ENST00000397511 PNPT1Q8TCS8 783 aaKnown RBP5□□□□□ -1.61
SSR1-202ENST00000397511 BLOC1S5Q8TDH9 187 aa5□□□□□ -1.61
SSR1-202ENST00000397511 KCTD13Q8WZ19 329 aa5□□□□□ -1.61
SSR1-202ENST00000397511 KCNA7Q96RP8 456 aa5□□□□□ -1.61
SSR1-202ENST00000397511 CDK5RAP1Q96SZ6 601 aaKnown RBP5□□□□□ -1.61
SSR1-202ENST00000397511 RTP3Q9BQQ7 232 aa5□□□□□ -1.61
SSR1-202ENST00000397511 SYT17Q9BSW7 474 aa5□□□□□ -1.61
SSR1-202ENST00000397511 C1QTNF1Q9BXJ1 281 aa5□□□□□ -1.61
SSR1-202ENST00000397511 OSBPL2Q9H1P3 480 aa5□□□□□ -1.61
SSR1-202ENST00000397511 RHOJQ9H4E5 214 aa5□□□□□ -1.61
SSR1-202ENST00000397511 RUBCNLQ9H714 662 aa5□□□□□ -1.61
SSR1-202ENST00000397511 GIMAP4Q9NUV9 329 aa5□□□□□ -1.61
SSR1-202ENST00000397511 OSER1Q9NX31 292 aa5□□□□□ -1.61
SSR1-202ENST00000397511 PKD2L2Q9NZM6 624 aa5□□□□□ -1.61
SSR1-202ENST00000397511 KLQ9UEF7 1012 aa5□□□□□ -1.61
SSR1-202ENST00000397511 GTF2IRD1Q9UHL9 959 aa5□□□□□ -1.61
SSR1-202ENST00000397511 DICER1Q9UPY3 1922 aaKnown RBP4.99□□□□□ -1.61
SSR1-202ENST00000397511 CROCCQ5TZA2 2017 aa4.99□□□□□ -1.61
SSR1-202ENST00000397511 A0A1W2PQH9 124 aa4.99□□□□□ -1.61
SSR1-202ENST00000397511 FAM149AA5PLN7 773 aa4.99□□□□□ -1.61
SSR1-202ENST00000397511 SNTNA6NMZ2 147 aa4.99□□□□□ -1.61
SSR1-202ENST00000397511 ZNF487B1APH4 448 aa4.99□□□□□ -1.61
SSR1-202ENST00000397511 TRIM38O00635 465 aa4.99□□□□□ -1.61
SSR1-202ENST00000397511 ACOT8O14734 319 aa4.99□□□□□ -1.61
SSR1-202ENST00000397511 GPC4O75487 556 aa4.99□□□□□ -1.61
SSR1-202ENST00000397511 KCNH1O95259 989 aa4.99□□□□□ -1.61
SSR1-202ENST00000397511 CHRNA1P02708 482 aa4.99□□□□□ -1.61
SSR1-202ENST00000397511 NTRK1P04629 796 aa4.99□□□□□ -1.61
SSR1-202ENST00000397511 ZNF865P0CJ78 1059 aaPredicted RBP4.99□□□□□ -1.61
SSR1-202ENST00000397511 CPB1P15086 417 aa4.99□□□□□ -1.61
SSR1-202ENST00000397511 CHRM3P20309 590 aa4.99□□□□□ -1.61
SSR1-202ENST00000397511 GLDCP23378 1020 aa4.99□□□□□ -1.61
SSR1-202ENST00000397511 GRIA3P42263 894 aa4.99□□□□□ -1.61
SSR1-202ENST00000397511 LHX1P48742 406 aa4.99□□□□□ -1.61
SSR1-202ENST00000397511 NPY2RP49146 381 aa4.99□□□□□ -1.61
SSR1-202ENST00000397511 PRKAA2P54646 552 aa4.99□□□□□ -1.61
SSR1-202ENST00000397511 HSPA14Q0VDF9 509 aa4.99□□□□□ -1.61
SSR1-202ENST00000397511 EFEMP1Q12805 493 aa4.99□□□□□ -1.61
SSR1-202ENST00000397511 CDC20Q12834 499 aa4.99□□□□□ -1.61
SSR1-202ENST00000397511 GALNT3Q14435 633 aa4.99□□□□□ -1.61
SSR1-202ENST00000397511 PLA2G4EQ3MJ16 856 aa4.99□□□□□ -1.61
SSR1-202ENST00000397511 AASDHQ4L235 1098 aaPredicted RBP4.99□□□□□ -1.61
SSR1-202ENST00000397511 ALFQ53S48 1182 aa4.99□□□□□ -1.61
SSR1-202ENST00000397511 PCID2Q5JVF3 399 aa4.99□□□□□ -1.61
SSR1-202ENST00000397511 UBE2UQ5VVX9 321 aa4.99□□□□□ -1.61
SSR1-202ENST00000397511 OVOS1Q6IE37 1185 aa4.99□□□□□ -1.61
SSR1-202ENST00000397511 DENND5AQ6IQ26 1287 aa4.99□□□□□ -1.61
SSR1-202ENST00000397511 ZYG11AQ6WRX3 759 aa4.99□□□□□ -1.61
SSR1-202ENST00000397511 KIAA0408Q6ZU52 694 aa4.99□□□□□ -1.61
SSR1-202ENST00000397511 USP50Q70EL3 339 aaPredicted RBP4.99□□□□□ -1.61
SSR1-202ENST00000397511 BTLAQ7Z6A9 289 aa4.99□□□□□ -1.61
SSR1-202ENST00000397511 ZNF598Q86UK7 904 aaKnown RBP4.99□□□□□ -1.61
SSR1-202ENST00000397511 SLC22A16Q86VW1 577 aa4.99□□□□□ -1.61
SSR1-202ENST00000397511 CCDC28AQ8IWP9 274 aa4.99□□□□□ -1.61
SSR1-202ENST00000397511 PARP8Q8N3A8 854 aa4.99□□□□□ -1.61
SSR1-202ENST00000397511 OR13F1Q8NGS4 319 aa4.99□□□□□ -1.61
SSR1-202ENST00000397511 GABPB2Q8TAK5 448 aaPredicted RBP4.99□□□□□ -1.61
SSR1-202ENST00000397511 HDAC10Q969S8 669 aa4.99□□□□□ -1.61
SSR1-202ENST00000397511 PSMG2Q969U7 264 aa4.99□□□□□ -1.61
SSR1-202ENST00000397511 VPS33AQ96AX1 596 aa4.99□□□□□ -1.61
SSR1-202ENST00000397511 GLT1D1Q96MS3 346 aa4.99□□□□□ -1.61
SSR1-202ENST00000397511 HBEGFQ99075 208 aa4.99□□□□□ -1.61
SSR1-202ENST00000397511 TCF12Q99081 682 aa4.99□□□□□ -1.61
SSR1-202ENST00000397511 GPR22Q99680 433 aa4.99□□□□□ -1.61
SSR1-202ENST00000397511 C2orf49Q9BVC5 232 aaPredicted RBP4.99□□□□□ -1.61
SSR1-202ENST00000397511 YTHDF1Q9BYJ9 559 aaKnown RBP4.99□□□□□ -1.61
SSR1-202ENST00000397511 DNAI2Q9GZS0 605 aa4.99□□□□□ -1.61
SSR1-202ENST00000397511 SCUBE2Q9NQ36 999 aa4.99□□□□□ -1.61
SSR1-202ENST00000397511 C12orf4Q9NQ89 552 aa4.99□□□□□ -1.61
SSR1-202ENST00000397511 DUS2Q9NX74 493 aaKnown RBP4.99□□□□□ -1.61
SSR1-202ENST00000397511 EGFL7Q9UHF1 273 aa4.99□□□□□ -1.61
SSR1-202ENST00000397511 FBXO5Q9UKT4 447 aa4.99□□□□□ -1.61
SSR1-202ENST00000397511 PADI3Q9ULW8 664 aa4.99□□□□□ -1.61
SSR1-202ENST00000397511 FAM50BQ9Y247 325 aa4.99□□□□□ -1.61
SSR1-202ENST00000397511 SLC27A5Q9Y2P5 690 aa4.99□□□□□ -1.61
SSR1-202ENST00000397511 TESMINQ9Y4I5 508 aa4.99□□□□□ -1.61
SSR1-202ENST00000397511 UBA6A0AVT1 1052 aaPredicted RBP4.99□□□□□ -1.61
SSR1-202ENST00000397511 B8ZZF3 427 aa4.99□□□□□ -1.61
SSR1-202ENST00000397511 E7ENX8 843 aa4.99□□□□□ -1.61
SSR1-202ENST00000397511 HAT1O14929 419 aa4.99□□□□□ -1.61
SSR1-202ENST00000397511 NCAM2O15394 837 aa4.99□□□□□ -1.61
SSR1-202ENST00000397511 TOMM70O94826 608 aa4.99□□□□□ -1.61
SSR1-202ENST00000397511 MYCP01106 439 aaPredicted RBP4.99□□□□□ -1.61
SSR1-202ENST00000397511 MT-ND1P03886 318 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms