RNA–Protein interactions for RNA: ENST00000397442.5

CPNE1-203, Transcript of copine 1, humanhuman

TSL 5 BASIC

Gene CPNE1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-203ENST00000397442 CLPBQ9H078 707 aa27.23■■□□□ 1.95
CPNE1-203ENST00000397442 CCDC68Q9H2F9 335 aa27.23■■□□□ 1.95
CPNE1-203ENST00000397442 ZNF358Q9NW07 568 aa27.23■■□□□ 1.95
CPNE1-203ENST00000397442 NKIRAS1Q9NYS0 192 aa27.23■■□□□ 1.95
CPNE1-203ENST00000397442 DCDC2Q9UHG0 476 aa27.23■■□□□ 1.95
CPNE1-203ENST00000397442 CNOT6Q9ULM6 557 aaKnown RBP27.23■■□□□ 1.95
CPNE1-203ENST00000397442 NCKAP1Q9Y2A7 1128 aa27.23■■□□□ 1.95
CPNE1-203ENST00000397442 ACOT9Q9Y305 439 aa27.23■■□□□ 1.95
CPNE1-203ENST00000397442 COMMD10Q9Y6G5 202 aa27.23■■□□□ 1.95
CPNE1-203ENST00000397442 DNAJC6O75061 913 aa27.22■■□□□ 1.95
CPNE1-203ENST00000397442 NIPSNAP2O75323 286 aa27.22■■□□□ 1.95
CPNE1-203ENST00000397442 CD9P21926 228 aa27.22■■□□□ 1.95
CPNE1-203ENST00000397442 MDH1P40925 334 aaKnown RBP27.22■■□□□ 1.95
CPNE1-203ENST00000397442 CBX1P83916 185 aa27.22■■□□□ 1.95
CPNE1-203ENST00000397442 LRRC14Q15048 493 aa27.22■■□□□ 1.95
CPNE1-203ENST00000397442 KHDC1Q4VXA5 237 aaKnown RBP27.22■■□□□ 1.95
CPNE1-203ENST00000397442 TAF1BQ53T94 588 aaPredicted RBP27.22■■□□□ 1.95
CPNE1-203ENST00000397442 FAM124AQ86V42 546 aa27.22■■□□□ 1.95
CPNE1-203ENST00000397442 GLYATL1Q969I3 302 aa27.22■■□□□ 1.95
CPNE1-203ENST00000397442 C1QTNF2Q9BXJ5 285 aa27.22■■□□□ 1.95
CPNE1-203ENST00000397442 OSBPL6Q9BZF3 934 aa27.22■■□□□ 1.95
CPNE1-203ENST00000397442 PREBQ9HCU5 417 aa27.22■■□□□ 1.95
CPNE1-203ENST00000397442 ITM2CQ9NQX7 267 aa27.22■■□□□ 1.95
CPNE1-203ENST00000397442 USP36Q9P275 1121 aaKnown RBP27.22■■□□□ 1.95
CPNE1-203ENST00000397442 GALPQ9UBC7 116 aa27.22■■□□□ 1.95
CPNE1-203ENST00000397442 EMCNQ9ULC0 261 aa27.22■■□□□ 1.95
CPNE1-203ENST00000397442 ANKRD6Q9Y2G4 727 aa27.22■■□□□ 1.95
CPNE1-203ENST00000397442 GLRA3O75311 464 aa27.21■■□□□ 1.95
CPNE1-203ENST00000397442 NSG1P42857 185 aa27.21■■□□□ 1.95
CPNE1-203ENST00000397442 RPS21P63220 83 aaKnown RBP27.21■■□□□ 1.95
CPNE1-203ENST00000397442 SFSWAPQ12872 951 aaKnown RBP27.21■■□□□ 1.95
CPNE1-203ENST00000397442 INSCQ1MX18 579 aa27.21■■□□□ 1.95
CPNE1-203ENST00000397442 KIAA1161Q6NSJ0 714 aa27.21■■□□□ 1.95
CPNE1-203ENST00000397442 KCNJ9Q92806 393 aa27.21■■□□□ 1.95
CPNE1-203ENST00000397442 FAM136AQ96C01 138 aa27.21■■□□□ 1.95
CPNE1-203ENST00000397442 POPDC3Q9HBV1 291 aa27.21■■□□□ 1.95
CPNE1-203ENST00000397442 GPAMQ9HCL2 828 aa27.21■■□□□ 1.95
CPNE1-203ENST00000397442 INTS9Q9NV88 658 aaKnown RBP27.21■■□□□ 1.95
CPNE1-203ENST00000397442 MBD1Q9UIS9 605 aaPredicted RBP27.21■■□□□ 1.95
CPNE1-203ENST00000397442 PIKFYVEQ9Y2I7 2098 aa27.21■■□□□ 1.95
CPNE1-203ENST00000397442 A0A1W2PQU0 124 aa27.21■■□□□ 1.95
CPNE1-203ENST00000397442 IQCF5A8MTL0 148 aa27.21■■□□□ 1.95
CPNE1-203ENST00000397442 RNGTTO60942 597 aaKnown RBP27.21■■□□□ 1.95
CPNE1-203ENST00000397442 RHOBTB1O94844 696 aa27.21■■□□□ 1.95
CPNE1-203ENST00000397442 ASMTLO95671 621 aa27.21■■□□□ 1.95
CPNE1-203ENST00000397442 DLG1Q12959 904 aa27.21■■□□□ 1.95
CPNE1-203ENST00000397442 WSCD2Q2TBF2 565 aa27.21■■□□□ 1.95
CPNE1-203ENST00000397442 MACC1Q6ZN28 852 aa27.21■■□□□ 1.95
CPNE1-203ENST00000397442 PLA2G15Q8NCC3 412 aa27.21■■□□□ 1.95
CPNE1-203ENST00000397442 KCTD4Q8WVF5 259 aa27.21■■□□□ 1.95
CPNE1-203ENST00000397442 UBXN10Q96LJ8 280 aa27.21■■□□□ 1.95
CPNE1-203ENST00000397442 FAM111AQ96PZ2 611 aa27.21■■□□□ 1.95
CPNE1-203ENST00000397442 CHRDQ9H2X0 955 aa27.21■■□□□ 1.95
CPNE1-203ENST00000397442 KCTD5Q9NXV2 234 aa27.21■■□□□ 1.95
CPNE1-203ENST00000397442 TAS2R13Q9NYV9 303 aa27.21■■□□□ 1.95
CPNE1-203ENST00000397442 TMEM216Q9P0N5 145 aa27.21■■□□□ 1.95
CPNE1-203ENST00000397442 OAS3Q9Y6K5 1087 aaKnown RBP27.21■■□□□ 1.95
CPNE1-203ENST00000397442 A0A087X1B8 175 aa27.2■■□□□ 1.94
CPNE1-203ENST00000397442 PRR23AA6NEV1 266 aa27.2■■□□□ 1.94
CPNE1-203ENST00000397442 MTX2O75431 263 aa27.2■■□□□ 1.94
CPNE1-203ENST00000397442 GSTA1P08263 222 aa27.2■■□□□ 1.94
CPNE1-203ENST00000397442 COL6A2P12110 1019 aa27.2■■□□□ 1.94
CPNE1-203ENST00000397442 ACSL1P33121 698 aa27.2■■□□□ 1.94
CPNE1-203ENST00000397442 TMEM31Q5JXX7 168 aa27.2■■□□□ 1.94
CPNE1-203ENST00000397442 TTC19Q6DKK2 380 aaPredicted RBP27.2■■□□□ 1.94
CPNE1-203ENST00000397442 LVRNQ6Q4G3 990 aa27.2■■□□□ 1.94
CPNE1-203ENST00000397442 ANKRD49Q8WVL7 239 aa27.2■■□□□ 1.94
CPNE1-203ENST00000397442 NECAB3Q96P71 396 aaPredicted RBP27.2■■□□□ 1.94
CPNE1-203ENST00000397442 GPR21Q99679 349 aa27.2■■□□□ 1.94
CPNE1-203ENST00000397442 SLC30A3Q99726 388 aa27.2■■□□□ 1.94
CPNE1-203ENST00000397442 IQCGQ9H095 443 aaKnown RBP27.2■■□□□ 1.94
CPNE1-203ENST00000397442 KDM4CQ9H3R0 1056 aa27.2■■□□□ 1.94
CPNE1-203ENST00000397442 GNPTGQ9UJJ9 305 aa27.2■■□□□ 1.94
CPNE1-203ENST00000397442 GRID1Q9ULK0 1009 aa27.2■■□□□ 1.94
CPNE1-203ENST00000397442 TBC1D3DA0A087WVF3 549 aa27.19■■□□□ 1.94
CPNE1-203ENST00000397442 TBC1D3IA0A087WXS9 549 aa27.19■■□□□ 1.94
CPNE1-203ENST00000397442 TBC1D3EA0A087X179 549 aa27.19■■□□□ 1.94
CPNE1-203ENST00000397442 TBC1D3KA0A087X1G2 549 aa27.19■■□□□ 1.94
CPNE1-203ENST00000397442 TBC1D3FA6NER0 549 aaPredicted RBP27.19■■□□□ 1.94
CPNE1-203ENST00000397442 TBC1D3LB9A6J9 549 aa27.19■■□□□ 1.94
CPNE1-203ENST00000397442 IGLV3-19P01714 112 aa27.19■■□□□ 1.94
CPNE1-203ENST00000397442 TBC1D3HP0C7X1 549 aa27.19■■□□□ 1.94
CPNE1-203ENST00000397442 DHRS4L1P0CG22 281 aa27.19■■□□□ 1.94
CPNE1-203ENST00000397442 GPR1P46091 355 aa27.19■■□□□ 1.94
CPNE1-203ENST00000397442 PPP2CBP62714 309 aa27.19■■□□□ 1.94
CPNE1-203ENST00000397442 PPP2CAP67775 309 aa27.19■■□□□ 1.94
CPNE1-203ENST00000397442 ZXDAP98168 799 aa27.19■■□□□ 1.94
CPNE1-203ENST00000397442 N4BP2L1Q5TBK1 243 aaPredicted RBP27.19■■□□□ 1.94
CPNE1-203ENST00000397442 TBC1D3GQ6DHY5 549 aa27.19■■□□□ 1.94
CPNE1-203ENST00000397442 RAET1GQ6H3X3 334 aa27.19■■□□□ 1.94
CPNE1-203ENST00000397442 TBC1D3CQ6IPX1 549 aa27.19■■□□□ 1.94
CPNE1-203ENST00000397442 ANO7Q6IWH7 933 aa27.19■■□□□ 1.94
CPNE1-203ENST00000397442 C16orf46Q6P387 395 aa27.19■■□□□ 1.94
CPNE1-203ENST00000397442 NEK5Q6P3R8 708 aa27.19■■□□□ 1.94
CPNE1-203ENST00000397442 HORMAD1Q86X24 394 aa27.19■■□□□ 1.94
CPNE1-203ENST00000397442 TBC1D3Q8IZP1 549 aaPredicted RBP27.19■■□□□ 1.94
CPNE1-203ENST00000397442 TSTD1Q8NFU3 115 aa27.19■■□□□ 1.94
CPNE1-203ENST00000397442 GIMAP7Q8NHV1 300 aa27.19■■□□□ 1.94
CPNE1-203ENST00000397442 GDAP1Q8TB36 358 aa27.19■■□□□ 1.94
CPNE1-203ENST00000397442 LKAAEAR1Q8TD35 194 aa27.19■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms