RNA–Protein interactions for RNA: ENST00000397396.5

TSPAN4-202, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,332 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-202ENST00000397396 PRAMEF26H0Y7S4 382 aa23.33■■□□□ 1.32
TSPAN4-202ENST00000397396 SLC31A1O15431 190 aa23.33■■□□□ 1.32
TSPAN4-202ENST00000397396 VEGFDO43915 354 aa23.33■■□□□ 1.32
TSPAN4-202ENST00000397396 TRIM23P36406 574 aa23.33■■□□□ 1.32
TSPAN4-202ENST00000397396 TNFAIP8L3Q5GJ75 292 aa23.33■■□□□ 1.32
TSPAN4-202ENST00000397396 LONP2Q86WA8 852 aa23.33■■□□□ 1.32
TSPAN4-202ENST00000397396 DCLK2Q8N568 766 aa23.33■■□□□ 1.32
TSPAN4-202ENST00000397396 TMEM105Q8N8V8 129 aa23.33■■□□□ 1.32
TSPAN4-202ENST00000397396 ACMSDQ8TDX5 336 aa23.33■■□□□ 1.32
TSPAN4-202ENST00000397396 KLK6Q92876 244 aa23.33■■□□□ 1.32
TSPAN4-202ENST00000397396 ISL2Q96A47 359 aa23.33■■□□□ 1.32
TSPAN4-202ENST00000397396 ZNF514Q96K75 400 aaPredicted RBP23.33■■□□□ 1.32
TSPAN4-202ENST00000397396 CABS1Q96KC9 395 aa23.33■■□□□ 1.32
TSPAN4-202ENST00000397396 ATP6V1G3Q96LB4 118 aa23.33■■□□□ 1.32
TSPAN4-202ENST00000397396 AARSD1Q9BTE6 412 aaKnown RBP23.33■■□□□ 1.32
TSPAN4-202ENST00000397396 TEX101Q9BY14 249 aa23.33■■□□□ 1.32
TSPAN4-202ENST00000397396 P2RY12Q9H244 342 aa23.33■■□□□ 1.32
TSPAN4-202ENST00000397396 GPR89AB7ZAQ6 455 aa23.32■■□□□ 1.32
TSPAN4-202ENST00000397396 IGHV4-34P06331 123 aa23.32■■□□□ 1.32
TSPAN4-202ENST00000397396 HOXC4P09017 264 aaPredicted RBP23.32■■□□□ 1.32
TSPAN4-202ENST00000397396 OR56A5P0C7T3 313 aa23.32■■□□□ 1.32
TSPAN4-202ENST00000397396 GPR89BP0CG08 455 aa23.32■■□□□ 1.32
TSPAN4-202ENST00000397396 CD9P21926 228 aa23.32■■□□□ 1.32
TSPAN4-202ENST00000397396 IGFALSP35858 605 aa23.32■■□□□ 1.32
TSPAN4-202ENST00000397396 CDK3Q00526 305 aa23.32■■□□□ 1.32
TSPAN4-202ENST00000397396 RPL6Q02878 288 aaKnown RBP23.32■■□□□ 1.32
TSPAN4-202ENST00000397396 BMPR2Q13873 1038 aa23.32■■□□□ 1.32
TSPAN4-202ENST00000397396 GTF2H3Q13889 308 aa23.32■■□□□ 1.32
TSPAN4-202ENST00000397396 USP10Q14694 798 aaKnown RBP23.32■■□□□ 1.32
TSPAN4-202ENST00000397396 ZNF789Q5FWF6 425 aa23.32■■□□□ 1.32
TSPAN4-202ENST00000397396 PTRHD1Q6GMV3 140 aaKnown RBP23.32■■□□□ 1.32
TSPAN4-202ENST00000397396 UGT3A1Q6NUS8 523 aa23.32■■□□□ 1.32
TSPAN4-202ENST00000397396 MACC1Q6ZN28 852 aa23.32■■□□□ 1.32
TSPAN4-202ENST00000397396 TRABD2AQ86V40 505 aa23.32■■□□□ 1.32
TSPAN4-202ENST00000397396 HEATR4Q86WZ0 1026 aa23.32■■□□□ 1.32
TSPAN4-202ENST00000397396 MZB1Q8WU39 189 aa23.32■■□□□ 1.32
TSPAN4-202ENST00000397396 KCNJ9Q92806 393 aa23.32■■□□□ 1.32
TSPAN4-202ENST00000397396 COX14Q96I36 57 aa23.32■■□□□ 1.32
TSPAN4-202ENST00000397396 PANX3Q96QZ0 392 aa23.32■■□□□ 1.32
TSPAN4-202ENST00000397396 KLF6Q99612 283 aaPredicted RBP23.32■■□□□ 1.32
TSPAN4-202ENST00000397396 POPDC3Q9HBV1 291 aa23.32■■□□□ 1.32
TSPAN4-202ENST00000397396 TRIM39Q9HCM9 518 aa23.32■■□□□ 1.32
TSPAN4-202ENST00000397396 TMPRSS11EQ9UL52 423 aa23.32■■□□□ 1.32
TSPAN4-202ENST00000397396 ZBTB32Q9Y2Y4 487 aaPredicted RBP23.32■■□□□ 1.32
TSPAN4-202ENST00000397396 MTO1Q9Y2Z2 717 aaKnown RBP23.32■■□□□ 1.32
TSPAN4-202ENST00000397396 HS3ST3A1Q9Y663 406 aa23.32■■□□□ 1.32
TSPAN4-202ENST00000397396 K7ESM1 405 aa23.31■■□□□ 1.32
TSPAN4-202ENST00000397396 CACNB4O00305 520 aaPredicted RBP23.31■■□□□ 1.32
TSPAN4-202ENST00000397396 INPP4BO15327 924 aa23.31■■□□□ 1.32
TSPAN4-202ENST00000397396 MAP3K13O43283 966 aa23.31■■□□□ 1.32
TSPAN4-202ENST00000397396 OR1I1O60431 355 aa23.31■■□□□ 1.32
TSPAN4-202ENST00000397396 VPS26AO75436 327 aa23.31■■□□□ 1.32
TSPAN4-202ENST00000397396 MYCLP1P12525 358 aaPredicted RBP23.31■■□□□ 1.32
TSPAN4-202ENST00000397396 TDGF1P13385 188 aa23.31■■□□□ 1.32
TSPAN4-202ENST00000397396 ATP1B2P14415 290 aaPredicted RBP23.31■■□□□ 1.32
TSPAN4-202ENST00000397396 STMN1P16949 149 aa23.31■■□□□ 1.32
TSPAN4-202ENST00000397396 CRABP2P29373 138 aa23.31■■□□□ 1.32
TSPAN4-202ENST00000397396 FMO4P31512 558 aa23.31■■□□□ 1.32
TSPAN4-202ENST00000397396 INPP5AQ14642 412 aa23.31■■□□□ 1.32
TSPAN4-202ENST00000397396 TAF1BQ53T94 588 aaPredicted RBP23.31■■□□□ 1.32
TSPAN4-202ENST00000397396 HECTD2Q5U5R9 776 aa23.31■■□□□ 1.32
TSPAN4-202ENST00000397396 MICALCLQ6ZW33 695 aa23.31■■□□□ 1.32
TSPAN4-202ENST00000397396 PLA2G15Q8NCC3 412 aa23.31■■□□□ 1.32
TSPAN4-202ENST00000397396 ALKBH8Q96BT7 664 aaKnown RBP23.31■■□□□ 1.32
TSPAN4-202ENST00000397396 BIRC7Q96CA5 298 aa23.31■■□□□ 1.32
TSPAN4-202ENST00000397396 BIRC8Q96P09 236 aa23.31■■□□□ 1.32
TSPAN4-202ENST00000397396 EPHX3Q9H6B9 360 aa23.31■■□□□ 1.32
TSPAN4-202ENST00000397396 MBNL1Q9NR56 388 aaKnown RBP23.31■■□□□ 1.32
TSPAN4-202ENST00000397396 TAS2R13Q9NYV9 303 aa23.31■■□□□ 1.32
TSPAN4-202ENST00000397396 SLC39A10Q9ULF5 831 aa23.31■■□□□ 1.32
TSPAN4-202ENST00000397396 CNOT6Q9ULM6 557 aaKnown RBP23.31■■□□□ 1.32
TSPAN4-202ENST00000397396 VWA7Q9Y334 891 aa23.31■■□□□ 1.32
TSPAN4-202ENST00000397396 A0A1W2PPC4 97 aa23.3■■□□□ 1.32
TSPAN4-202ENST00000397396 METTL12A8MUP2 240 aa23.3■■□□□ 1.32
TSPAN4-202ENST00000397396 E5RI56 91 aa23.3■■□□□ 1.32
TSPAN4-202ENST00000397396 MPOP05164 745 aa23.3■■□□□ 1.32
TSPAN4-202ENST00000397396 GSTM1P09488 218 aa23.3■■□□□ 1.32
TSPAN4-202ENST00000397396 KELP23276 732 aa23.3■■□□□ 1.32
TSPAN4-202ENST00000397396 TYK2P29597 1187 aa23.3■■□□□ 1.32
TSPAN4-202ENST00000397396 ABCG1P45844 678 aa23.3■■□□□ 1.32
TSPAN4-202ENST00000397396 YPEL5P62699 121 aa23.3■■□□□ 1.32
TSPAN4-202ENST00000397396 GSTM4Q03013 218 aa23.3■■□□□ 1.32
TSPAN4-202ENST00000397396 CSTF1Q05048 431 aaKnown RBP23.3■■□□□ 1.32
TSPAN4-202ENST00000397396 NUMA1Q14980 2115 aa23.3■■□□□ 1.32
TSPAN4-202ENST00000397396 CYP4X1Q8N118 509 aa23.3■■□□□ 1.32
TSPAN4-202ENST00000397396 FAM160A2Q8N612 972 aaPredicted RBP23.3■■□□□ 1.32
TSPAN4-202ENST00000397396 SMC6Q96SB8 1091 aa23.3■■□□□ 1.32
TSPAN4-202ENST00000397396 BOCQ9BWV1 1114 aa23.3■■□□□ 1.32
TSPAN4-202ENST00000397396 NOVA2Q9UNW9 492 aaKnown RBP23.3■■□□□ 1.32
TSPAN4-202ENST00000397396 HMX2A2RU54 273 aa23.29■■□□□ 1.32
TSPAN4-202ENST00000397396 MEI4A8MW99 385 aa23.29■■□□□ 1.32
TSPAN4-202ENST00000397396 TNFRSF10AO00220 468 aa23.29■■□□□ 1.32
TSPAN4-202ENST00000397396 RAD51BO15315 384 aa23.29■■□□□ 1.32
TSPAN4-202ENST00000397396 RHOBTB1O94844 696 aa23.29■■□□□ 1.32
TSPAN4-202ENST00000397396 SYF2O95926 243 aaKnown RBP23.29■■□□□ 1.32
TSPAN4-202ENST00000397396 FTH1P02794 183 aa23.29■■□□□ 1.32
TSPAN4-202ENST00000397396 SKIV2L2P42285 1042 aaKnown RBP23.29■■□□□ 1.32
TSPAN4-202ENST00000397396 KIAA1024LP59773 190 aa23.29■■□□□ 1.32
TSPAN4-202ENST00000397396 RAB10P61026 200 aa23.29■■□□□ 1.32
TSPAN4-202ENST00000397396 TMEM115Q12893 351 aaPredicted RBP23.29■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms