RNA–Protein interactions for RNA: ENST00000396828.8

NEDD8-202, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-202ENST00000396828 MYCLP1P12525 358 aaPredicted RBP10.28□□□□□ -0.76
NEDD8-202ENST00000396828 CCL4P13236 92 aa10.28□□□□□ -0.76
NEDD8-202ENST00000396828 CCNB1P14635 433 aa10.28□□□□□ -0.76
NEDD8-202ENST00000396828 PNLIPP16233 465 aa10.28□□□□□ -0.76
NEDD8-202ENST00000396828 CTPS1P17812 591 aa10.28□□□□□ -0.76
NEDD8-202ENST00000396828 MPSTP25325 297 aa10.28□□□□□ -0.76
NEDD8-202ENST00000396828 GARSP41250 739 aaKnown RBP10.28□□□□□ -0.76
NEDD8-202ENST00000396828 GNPDA1P46926 289 aa10.28□□□□□ -0.76
NEDD8-202ENST00000396828 MAPK10P53779 464 aa10.28□□□□□ -0.76
NEDD8-202ENST00000396828 AP1S1P61966 158 aa10.28□□□□□ -0.76
NEDD8-202ENST00000396828 POLR2LP62875 67 aaKnown RBP10.28□□□□□ -0.76
NEDD8-202ENST00000396828 GALNT2Q10471 571 aa10.28□□□□□ -0.76
NEDD8-202ENST00000396828 AP1B1Q10567 949 aa10.28□□□□□ -0.76
NEDD8-202ENST00000396828 SLC10A2Q12908 348 aaPredicted RBP10.28□□□□□ -0.76
NEDD8-202ENST00000396828 ARHGEF7Q14155 803 aa10.28□□□□□ -0.76
NEDD8-202ENST00000396828 RFTN1Q14699 578 aaPredicted RBP10.28□□□□□ -0.76
NEDD8-202ENST00000396828 FAM182AQ5T1J6 154 aa10.28□□□□□ -0.76
NEDD8-202ENST00000396828 PHF19Q5T6S3 580 aa10.28□□□□□ -0.76
NEDD8-202ENST00000396828 NKAIN2Q5VXU1 208 aa10.28□□□□□ -0.76
NEDD8-202ENST00000396828 TIGD7Q6NT04 549 aaPredicted RBP10.28□□□□□ -0.76
NEDD8-202ENST00000396828 Q6ZVL8 140 aa10.28□□□□□ -0.76
NEDD8-202ENST00000396828 ATPAF2Q8N5M1 289 aa10.28□□□□□ -0.76
NEDD8-202ENST00000396828 GPBAR1Q8TDU6 330 aa10.28□□□□□ -0.76
NEDD8-202ENST00000396828 HTR3CQ8WXA8 447 aa10.28□□□□□ -0.76
NEDD8-202ENST00000396828 HDAC11Q96DB2 347 aa10.28□□□□□ -0.76
NEDD8-202ENST00000396828 NUS1Q96E22 293 aa10.28□□□□□ -0.76
NEDD8-202ENST00000396828 DTD2Q96FN9 168 aa10.28□□□□□ -0.76
NEDD8-202ENST00000396828 TMEM74Q96NL1 305 aa10.28□□□□□ -0.76
NEDD8-202ENST00000396828 QKIQ96PU8 341 aaKnown RBP eCLIP10.28□□□□□ -0.76
NEDD8-202ENST00000396828 AGAP2Q99490 1192 aa10.28□□□□□ -0.76
NEDD8-202ENST00000396828 TMEM121Q9BTD3 319 aa10.28□□□□□ -0.76
NEDD8-202ENST00000396828 TEX101Q9BY14 249 aa10.28□□□□□ -0.76
NEDD8-202ENST00000396828 FRMD8Q9BZ67 464 aaPredicted RBP10.28□□□□□ -0.76
NEDD8-202ENST00000396828 SEPT3Q9UH03 358 aa10.28□□□□□ -0.76
NEDD8-202ENST00000396828 CD84Q9UIB8 345 aa10.28□□□□□ -0.76
NEDD8-202ENST00000396828 SUFUQ9UMX1 484 aa10.28□□□□□ -0.76
NEDD8-202ENST00000396828 PCYT1BQ9Y5K3 369 aaPredicted RBP10.28□□□□□ -0.76
NEDD8-202ENST00000396828 UQCRHLA0A096LP55 91 aa10.27□□□□□ -0.77
NEDD8-202ENST00000396828 IGHV5-10-1A0A0J9YXX1 117 aa10.27□□□□□ -0.77
NEDD8-202ENST00000396828 TMX2-CTNND1H3BSU7 103 aa10.27□□□□□ -0.77
NEDD8-202ENST00000396828 NDC80O14777 642 aa10.27□□□□□ -0.77
NEDD8-202ENST00000396828 PPM1DO15297 605 aa10.27□□□□□ -0.77
NEDD8-202ENST00000396828 KCNN4O15554 427 aa10.27□□□□□ -0.77
NEDD8-202ENST00000396828 IFNB1P01574 187 aa10.27□□□□□ -0.77
NEDD8-202ENST00000396828 KRT14P02533 472 aa10.27□□□□□ -0.77
NEDD8-202ENST00000396828 UQCRHP07919 91 aa10.27□□□□□ -0.77
NEDD8-202ENST00000396828 LIPCP11150 499 aa10.27□□□□□ -0.77
NEDD8-202ENST00000396828 ITGB6P18564 788 aa10.27□□□□□ -0.77
NEDD8-202ENST00000396828 KELP23276 732 aa10.27□□□□□ -0.77
NEDD8-202ENST00000396828 CD1CP29017 333 aa10.27□□□□□ -0.77
NEDD8-202ENST00000396828 ALDH4A1P30038 563 aa10.27□□□□□ -0.77
NEDD8-202ENST00000396828 VIPR1P32241 457 aa10.27□□□□□ -0.77
NEDD8-202ENST00000396828 PTGIRP43119 386 aa10.27□□□□□ -0.77
NEDD8-202ENST00000396828 CDK3Q00526 305 aa10.27□□□□□ -0.77
NEDD8-202ENST00000396828 CTBSQ01459 385 aa10.27□□□□□ -0.77
NEDD8-202ENST00000396828 SLC7A5Q01650 507 aa10.27□□□□□ -0.77
NEDD8-202ENST00000396828 PPIDQ08752 370 aaKnown RBP10.27□□□□□ -0.77
NEDD8-202ENST00000396828 PRKD1Q15139 912 aaPredicted RBP10.27□□□□□ -0.77
NEDD8-202ENST00000396828 TMCO4Q5TGY1 634 aa10.27□□□□□ -0.77
NEDD8-202ENST00000396828 SLC30A9Q6PML9 568 aa10.27□□□□□ -0.77
NEDD8-202ENST00000396828 C4orf22Q6V702 233 aa10.27□□□□□ -0.77
NEDD8-202ENST00000396828 ZNF438Q7Z4V0 828 aa10.27□□□□□ -0.77
NEDD8-202ENST00000396828 TECPR1Q7Z6L1 1165 aa10.27□□□□□ -0.77
NEDD8-202ENST00000396828 TRIM74Q86UV6 250 aa10.27□□□□□ -0.77
NEDD8-202ENST00000396828 DTX1Q86Y01 620 aa10.27□□□□□ -0.77
NEDD8-202ENST00000396828 IFT20Q8IY31 132 aa10.27□□□□□ -0.77
NEDD8-202ENST00000396828 NAGSQ8N159 534 aa10.27□□□□□ -0.77
NEDD8-202ENST00000396828 PAF1Q8N7H5 531 aa10.27□□□□□ -0.77
NEDD8-202ENST00000396828 FAM71DQ8N9W8 422 aa10.27□□□□□ -0.77
NEDD8-202ENST00000396828 ZDHHC1Q8WTX9 485 aa10.27□□□□□ -0.77
NEDD8-202ENST00000396828 LRRN4Q8WUT4 740 aa10.27□□□□□ -0.77
NEDD8-202ENST00000396828 NSMCE1Q8WV22 266 aa10.27□□□□□ -0.77
NEDD8-202ENST00000396828 SGF29Q96ES7 293 aa10.27□□□□□ -0.77
NEDD8-202ENST00000396828 ZNF599Q96NL3 588 aa10.27□□□□□ -0.77
NEDD8-202ENST00000396828 NUDCD1Q96RS6 583 aa10.27□□□□□ -0.77
NEDD8-202ENST00000396828 MGME1Q9BQP7 344 aa10.27□□□□□ -0.77
NEDD8-202ENST00000396828 TMEM9Q9P0T7 183 aa10.27□□□□□ -0.77
NEDD8-202ENST00000396828 TAAR2Q9P1P5 351 aa10.27□□□□□ -0.77
NEDD8-202ENST00000396828 TMEM98Q9Y2Y6 226 aa10.27□□□□□ -0.77
NEDD8-202ENST00000396828 UTP20O75691 2785 aaKnown RBP10.27□□□□□ -0.77
NEDD8-202ENST00000396828 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.26□□□□□ -0.77
NEDD8-202ENST00000396828 CAPN8A6NHC0 703 aa10.26□□□□□ -0.77
NEDD8-202ENST00000396828 SLC28A2O43868 658 aa10.26□□□□□ -0.77
NEDD8-202ENST00000396828 SOCS5O75159 536 aa10.26□□□□□ -0.77
NEDD8-202ENST00000396828 PGLSO95336 258 aa10.26□□□□□ -0.77
NEDD8-202ENST00000396828 CPNE6O95741 557 aa10.26□□□□□ -0.77
NEDD8-202ENST00000396828 EML2O95834 649 aa10.26□□□□□ -0.77
NEDD8-202ENST00000396828 CPP00450 1065 aa10.26□□□□□ -0.77
NEDD8-202ENST00000396828 FAM87AP0C7U9 286 aa10.26□□□□□ -0.77
NEDD8-202ENST00000396828 FGF3P11487 239 aaPredicted RBP10.26□□□□□ -0.77
NEDD8-202ENST00000396828 CCNCP24863 283 aa10.26□□□□□ -0.77
NEDD8-202ENST00000396828 RBL1P28749 1068 aa10.26□□□□□ -0.77
NEDD8-202ENST00000396828 CSF2RBP32927 897 aa10.26□□□□□ -0.77
NEDD8-202ENST00000396828 ADCY8P40145 1251 aa10.26□□□□□ -0.77
NEDD8-202ENST00000396828 RENBPP51606 427 aa10.26□□□□□ -0.77
NEDD8-202ENST00000396828 MRPS25P82663 173 aaKnown RBP10.26□□□□□ -0.77
NEDD8-202ENST00000396828 GUCY2DQ02846 1103 aa10.26□□□□□ -0.77
NEDD8-202ENST00000396828 NFATC3Q12968 1075 aa10.26□□□□□ -0.77
NEDD8-202ENST00000396828 PTK6Q13882 451 aa10.26□□□□□ -0.77
NEDD8-202ENST00000396828 ZNF235Q14590 738 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms