RNA–Protein interactions for RNA: ENST00000396594.7

GNE-202, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 5,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-202ENST00000396594 USP29Q9HBJ7 922 aa15.53■□□□□ 0.08
GNE-202ENST00000396594 AP2A2O94973 939 aa15.53■□□□□ 0.08
GNE-202ENST00000396594 CLCNKBP51801 687 aa15.53■□□□□ 0.08
GNE-202ENST00000396594 MANFP55145 182 aaKnown RBP15.53■□□□□ 0.08
GNE-202ENST00000396594 LACTB2Q53H82 288 aaPredicted RBP15.53■□□□□ 0.08
GNE-202ENST00000396594 OR4K2Q8NGD2 314 aa15.53■□□□□ 0.08
GNE-202ENST00000396594 HM13Q8TCT9 377 aa15.53■□□□□ 0.08
GNE-202ENST00000396594 MIEF2Q96C03 454 aa15.53■□□□□ 0.08
GNE-202ENST00000396594 TMED5Q9Y3A6 229 aa15.53■□□□□ 0.08
GNE-202ENST00000396594 RIPK3Q9Y572 518 aa15.53■□□□□ 0.08
GNE-202ENST00000396594 DUXAA6NLW8 204 aa15.53■□□□□ 0.08
GNE-202ENST00000396594 PRG2P13727 222 aa15.53■□□□□ 0.08
GNE-202ENST00000396594 RPL5P46777 297 aaKnown RBP15.53■□□□□ 0.08
GNE-202ENST00000396594 KHKP50053 298 aa15.53■□□□□ 0.08
GNE-202ENST00000396594 MAPK10P53779 464 aa15.53■□□□□ 0.08
GNE-202ENST00000396594 SLC10A6Q3KNW5 377 aa15.53■□□□□ 0.08
GNE-202ENST00000396594 OTOP3Q7RTS5 596 aa15.53■□□□□ 0.08
GNE-202ENST00000396594 SPRTNQ9H040 489 aaPredicted RBP15.53■□□□□ 0.08
GNE-202ENST00000396594 SMOC2Q9H3U7 446 aa15.53■□□□□ 0.08
GNE-202ENST00000396594 LRRC4CQ9HCJ2 640 aa15.53■□□□□ 0.08
GNE-202ENST00000396594 XPNPEP1Q9NQW7 623 aa15.53■□□□□ 0.08
GNE-202ENST00000396594 RAB26Q9ULW5 256 aa15.53■□□□□ 0.08
GNE-202ENST00000396594 CAPN14A8MX76 684 aa15.52■□□□□ 0.08
GNE-202ENST00000396594 POLR2JP52435 117 aaKnown RBP15.52■□□□□ 0.08
GNE-202ENST00000396594 FOXM1Q08050 763 aa15.52■□□□□ 0.08
GNE-202ENST00000396594 ANGPT1Q15389 498 aa15.52■□□□□ 0.08
GNE-202ENST00000396594 KLHL26Q53HC5 615 aa15.52■□□□□ 0.08
GNE-202ENST00000396594 TCHHL1Q5QJ38 904 aaPredicted RBP15.52■□□□□ 0.08
GNE-202ENST00000396594 EDDM13A0A1B0GTR0 161 aa15.52■□□□□ 0.08
GNE-202ENST00000396594 TXNL4AP83876 142 aaKnown RBP15.52■□□□□ 0.08
GNE-202ENST00000396594 CRELD1Q96HD1 420 aa15.52■□□□□ 0.08
GNE-202ENST00000396594 CNTN6Q9UQ52 1028 aa15.52■□□□□ 0.08
GNE-202ENST00000396594 PAPSS2O95340 614 aaPredicted RBP15.52■□□□□ 0.08
GNE-202ENST00000396594 CAPGP40121 348 aa15.52■□□□□ 0.08
GNE-202ENST00000396594 NDUFA5Q16718 116 aa15.52■□□□□ 0.08
GNE-202ENST00000396594 OTUD3Q5T2D3 398 aaPredicted RBP15.52■□□□□ 0.08
GNE-202ENST00000396594 CCNYL2Q5T2Q4 361 aa15.52■□□□□ 0.08
GNE-202ENST00000396594 CERCAMQ5T4B2 595 aa15.52■□□□□ 0.08
GNE-202ENST00000396594 RSBN1Q5VWQ0 802 aaPredicted RBP15.52■□□□□ 0.08
GNE-202ENST00000396594 C16orf46Q6P387 395 aa15.52■□□□□ 0.08
GNE-202ENST00000396594 RANBP3LQ86VV4 465 aaPredicted RBP15.52■□□□□ 0.08
GNE-202ENST00000396594 C11orf65Q8NCR3 313 aa15.52■□□□□ 0.08
GNE-202ENST00000396594 RFKQ969G6 155 aa15.52■□□□□ 0.08
GNE-202ENST00000396594 C10orf71Q711Q0 1435 aa15.52■□□□□ 0.07
GNE-202ENST00000396594 ALDH4A1P30038 563 aa15.52■□□□□ 0.07
GNE-202ENST00000396594 FAM189A2Q15884 450 aa15.52■□□□□ 0.07
GNE-202ENST00000396594 C10orf107Q8IVU9 208 aa15.52■□□□□ 0.07
GNE-202ENST00000396594 OR8H2Q8N162 312 aa15.52■□□□□ 0.07
GNE-202ENST00000396594 ALG3Q92685 438 aa15.52■□□□□ 0.07
GNE-202ENST00000396594 NR2E1Q9Y466 385 aa15.52■□□□□ 0.07
GNE-202ENST00000396594 ZFP37Q9Y6Q3 630 aaPredicted RBP15.52■□□□□ 0.07
GNE-202ENST00000396594 CHURC1-FNTBB4DL54 471 aa15.52■□□□□ 0.07
GNE-202ENST00000396594 CST1P01037 141 aa15.52■□□□□ 0.07
GNE-202ENST00000396594 INCA1Q0VD86 236 aa15.52■□□□□ 0.07
GNE-202ENST00000396594 ZC3H7AQ8IWR0 971 aaKnown RBP15.52■□□□□ 0.07
GNE-202ENST00000396594 RAPGEFL1Q9UHV5 662 aa15.52■□□□□ 0.07
GNE-202ENST00000396594 PHF11Q9UIL8 331 aa15.52■□□□□ 0.07
GNE-202ENST00000396594 ZNF490Q9ULM2 529 aaPredicted RBP15.52■□□□□ 0.07
GNE-202ENST00000396594 COMMD3-BMI1R4GMX3 469 aa15.52■□□□□ 0.07
GNE-202ENST00000396594 PITPNM1O00562 1244 aa15.51■□□□□ 0.07
GNE-202ENST00000396594 SLC28A2O43868 658 aa15.51■□□□□ 0.07
GNE-202ENST00000396594 C8AP07357 584 aa15.51■□□□□ 0.07
GNE-202ENST00000396594 HSMCR30P0CW71 290 aa15.51■□□□□ 0.07
GNE-202ENST00000396594 HRH2P25021 359 aa15.51■□□□□ 0.07
GNE-202ENST00000396594 CCR4P51679 360 aa15.51■□□□□ 0.07
GNE-202ENST00000396594 SP2Q02086 613 aa15.51■□□□□ 0.07
GNE-202ENST00000396594 ZCCHC23Q6ZST2 131 aa15.51■□□□□ 0.07
GNE-202ENST00000396594 CPNE9Q8IYJ1 553 aa15.51■□□□□ 0.07
GNE-202ENST00000396594 WDR48Q8TAF3 677 aa15.51■□□□□ 0.07
GNE-202ENST00000396594 TOP1MTQ969P6 601 aa15.51■□□□□ 0.07
GNE-202ENST00000396594 NUAK2Q9H093 628 aa15.51■□□□□ 0.07
GNE-202ENST00000396594 UBE2QL1A1L167 161 aa15.51■□□□□ 0.07
GNE-202ENST00000396594 ASNA1O43681 348 aa15.51■□□□□ 0.07
GNE-202ENST00000396594 PRAMEF1O95521 474 aa15.51■□□□□ 0.07
GNE-202ENST00000396594 F2P00734 622 aa15.51■□□□□ 0.07
GNE-202ENST00000396594 HNRNPA1P09651 372 aaKnown RBP eCLIP15.51■□□□□ 0.07
GNE-202ENST00000396594 RCVRNP35243 200 aa15.51■□□□□ 0.07
GNE-202ENST00000396594 BCAP31P51572 246 aa15.51■□□□□ 0.07
GNE-202ENST00000396594 ADGRF1Q5T601 910 aa15.51■□□□□ 0.07
GNE-202ENST00000396594 AARSD1Q9BTE6 412 aaKnown RBP15.51■□□□□ 0.07
GNE-202ENST00000396594 ARHGAP39Q9C0H5 1083 aa15.51■□□□□ 0.07
GNE-202ENST00000396594 UNC93B1Q9H1C4 597 aa15.51■□□□□ 0.07
GNE-202ENST00000396594 MAN2B2Q9Y2E5 1009 aa15.51■□□□□ 0.07
GNE-202ENST00000396594 SAMHD1Q9Y3Z3 626 aaKnown RBP15.51■□□□□ 0.07
GNE-202ENST00000396594 CCDC162PA2VCL2 907 aa15.51■□□□□ 0.07
GNE-202ENST00000396594 RB1P06400 928 aa15.51■□□□□ 0.07
GNE-202ENST00000396594 ALOX5P09917 674 aa15.51■□□□□ 0.07
GNE-202ENST00000396594 GRIA3P42263 894 aa15.51■□□□□ 0.07
GNE-202ENST00000396594 ZC3H3Q8IXZ2 948 aaKnown RBP15.51■□□□□ 0.07
GNE-202ENST00000396594 ZNF671Q8TAW3 534 aa15.51■□□□□ 0.07
GNE-202ENST00000396594 TCF25Q9BQ70 676 aa15.51■□□□□ 0.07
GNE-202ENST00000396594 DNAJB4Q9UDY4 337 aa15.51■□□□□ 0.07
GNE-202ENST00000396594 NUDT5Q9UKK9 219 aa15.51■□□□□ 0.07
GNE-202ENST00000396594 ZNF792Q3KQV3 632 aa15.51■□□□□ 0.07
GNE-202ENST00000396594 SMYD1Q8NB12 490 aa15.51■□□□□ 0.07
GNE-202ENST00000396594 ZDHHC3Q9NYG2 299 aa15.51■□□□□ 0.07
GNE-202ENST00000396594 SSR3Q9UNL2 185 aa15.51■□□□□ 0.07
GNE-202ENST00000396594 CPQQ9Y646 472 aa15.51■□□□□ 0.07
GNE-202ENST00000396594 ROBO1Q9Y6N7 1651 aa15.5■□□□□ 0.07
GNE-202ENST00000396594 A0A0J9YYE9 177 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms