RNA–Protein interactions for RNA: ENST00000395860.6

VCPKMT-202, Transcript of valosin containing protein lysine methyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPKMT, Length 1,761 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-202ENST00000395860 POPDC3Q9HBV1 291 aa20.23■□□□□ 0.83
VCPKMT-202ENST00000395860 KCTD5Q9NXV2 234 aa20.23■□□□□ 0.83
VCPKMT-202ENST00000395860 CAMSAP3Q9P1Y5 1249 aaPredicted RBP20.23■□□□□ 0.83
VCPKMT-202ENST00000395860 PRR23AA6NEV1 266 aa20.22■□□□□ 0.83
VCPKMT-202ENST00000395860 A6NNZ2 444 aa20.22■□□□□ 0.83
VCPKMT-202ENST00000395860 STK25O00506 426 aa20.22■□□□□ 0.83
VCPKMT-202ENST00000395860 NIPSNAP2O75323 286 aa20.22■□□□□ 0.83
VCPKMT-202ENST00000395860 PYGLP06737 847 aa20.22■□□□□ 0.83
VCPKMT-202ENST00000395860 COL6A2P12110 1019 aa20.22■□□□□ 0.83
VCPKMT-202ENST00000395860 CHRM3P20309 590 aa20.22■□□□□ 0.83
VCPKMT-202ENST00000395860 AKT1P31749 480 aa20.22■□□□□ 0.83
VCPKMT-202ENST00000395860 GNGT1P63211 74 aa20.22■□□□□ 0.83
VCPKMT-202ENST00000395860 DPTQ07507 201 aa20.22■□□□□ 0.83
VCPKMT-202ENST00000395860 TUBB8Q3ZCM7 444 aa20.22■□□□□ 0.83
VCPKMT-202ENST00000395860 N4BP2L1Q5TBK1 243 aaPredicted RBP20.22■□□□□ 0.83
VCPKMT-202ENST00000395860 RAET1GQ6H3X3 334 aa20.22■□□□□ 0.83
VCPKMT-202ENST00000395860 TRIM67Q6ZTA4 783 aa20.22■□□□□ 0.83
VCPKMT-202ENST00000395860 CCDC91Q7Z6B0 441 aa20.22■□□□□ 0.83
VCPKMT-202ENST00000395860 FAM124AQ86V42 546 aa20.22■□□□□ 0.83
VCPKMT-202ENST00000395860 PGBD3Q8N328 593 aa20.22■□□□□ 0.83
VCPKMT-202ENST00000395860 BTN2A2Q8WVV5 523 aa20.22■□□□□ 0.83
VCPKMT-202ENST00000395860 TBC1D17Q9HA65 648 aa20.22■□□□□ 0.83
VCPKMT-202ENST00000395860 PRSS21Q9Y6M0 314 aa20.22■□□□□ 0.83
VCPKMT-202ENST00000395860 PIKFYVEQ9Y2I7 2098 aa20.22■□□□□ 0.83
VCPKMT-202ENST00000395860 DNAJC6O75061 913 aa20.21■□□□□ 0.83
VCPKMT-202ENST00000395860 ASMTLO95671 621 aa20.21■□□□□ 0.83
VCPKMT-202ENST00000395860 GPR1P46091 355 aa20.21■□□□□ 0.83
VCPKMT-202ENST00000395860 RPS21P63220 83 aaKnown RBP20.21■□□□□ 0.83
VCPKMT-202ENST00000395860 TIAL1Q01085 375 aaKnown RBP eCLIP20.21■□□□□ 0.83
VCPKMT-202ENST00000395860 SEL1L3Q68CR1 1132 aa20.21■□□□□ 0.83
VCPKMT-202ENST00000395860 KIAA1161Q6NSJ0 714 aa20.21■□□□□ 0.83
VCPKMT-202ENST00000395860 KYAT3Q6YP21 454 aaKnown RBP20.21■□□□□ 0.83
VCPKMT-202ENST00000395860 LCA5Q86VQ0 697 aa20.21■□□□□ 0.83
VCPKMT-202ENST00000395860 NLRP8Q86W28 1048 aa20.21■□□□□ 0.83
VCPKMT-202ENST00000395860 CLDN19Q8N6F1 224 aa20.21■□□□□ 0.83
VCPKMT-202ENST00000395860 KCTD4Q8WVF5 259 aa20.21■□□□□ 0.83
VCPKMT-202ENST00000395860 KCNJ9Q92806 393 aa20.21■□□□□ 0.83
VCPKMT-202ENST00000395860 GLYATL1Q969I3 302 aa20.21■□□□□ 0.83
VCPKMT-202ENST00000395860 DCUN1D1Q96GG9 259 aa20.21■□□□□ 0.83
VCPKMT-202ENST00000395860 ASB2Q96Q27 587 aa20.21■□□□□ 0.83
VCPKMT-202ENST00000395860 GPR21Q99679 349 aa20.21■□□□□ 0.83
VCPKMT-202ENST00000395860 C1QTNF1Q9BXJ1 281 aa20.21■□□□□ 0.83
VCPKMT-202ENST00000395860 ZNF358Q9NW07 568 aa20.21■□□□□ 0.83
VCPKMT-202ENST00000395860 TMEM216Q9P0N5 145 aa20.21■□□□□ 0.83
VCPKMT-202ENST00000395860 MUTYHQ9UIF7 546 aa20.21■□□□□ 0.83
VCPKMT-202ENST00000395860 RUVBL2Q9Y230 463 aaKnown RBP20.21■□□□□ 0.83
VCPKMT-202ENST00000395860 IGLV3-16A0A075B6K0 115 aa20.21■□□□□ 0.83
VCPKMT-202ENST00000395860 TBC1D3DA0A087WVF3 549 aa20.21■□□□□ 0.83
VCPKMT-202ENST00000395860 TBC1D3IA0A087WXS9 549 aa20.21■□□□□ 0.83
VCPKMT-202ENST00000395860 TBC1D3EA0A087X179 549 aa20.21■□□□□ 0.83
VCPKMT-202ENST00000395860 TBC1D3KA0A087X1G2 549 aa20.21■□□□□ 0.83
VCPKMT-202ENST00000395860 TBC1D3FA6NER0 549 aaPredicted RBP20.21■□□□□ 0.83
VCPKMT-202ENST00000395860 TBC1D3LB9A6J9 549 aa20.21■□□□□ 0.83
VCPKMT-202ENST00000395860 H3BMM5 538 aa20.21■□□□□ 0.83
VCPKMT-202ENST00000395860 SLC25A14O95258 325 aaPredicted RBP20.21■□□□□ 0.83
VCPKMT-202ENST00000395860 TBC1D3HP0C7X1 549 aa20.21■□□□□ 0.83
VCPKMT-202ENST00000395860 ETV4P43268 484 aa20.21■□□□□ 0.83
VCPKMT-202ENST00000395860 IL9RQ01113 521 aa20.21■□□□□ 0.83
VCPKMT-202ENST00000395860 TBC1D3GQ6DHY5 549 aa20.21■□□□□ 0.83
VCPKMT-202ENST00000395860 TBC1D3CQ6IPX1 549 aa20.21■□□□□ 0.83
VCPKMT-202ENST00000395860 C16orf46Q6P387 395 aa20.21■□□□□ 0.83
VCPKMT-202ENST00000395860 TBC1D3Q8IZP1 549 aaPredicted RBP20.21■□□□□ 0.83
VCPKMT-202ENST00000395860 CENPLQ8N0S6 344 aaPredicted RBP20.21■□□□□ 0.83
VCPKMT-202ENST00000395860 CCDC63Q8NA47 563 aa20.21■□□□□ 0.83
VCPKMT-202ENST00000395860 DDHD1Q8NEL9 900 aa20.21■□□□□ 0.83
VCPKMT-202ENST00000395860 ARMC2Q8NEN0 867 aa20.21■□□□□ 0.83
VCPKMT-202ENST00000395860 OSBPL6Q9BZF3 934 aa20.21■□□□□ 0.83
VCPKMT-202ENST00000395860 PREBQ9HCU5 417 aa20.21■□□□□ 0.83
VCPKMT-202ENST00000395860 ZFR2Q9UPR6 939 aaKnown RBP20.21■□□□□ 0.83
VCPKMT-202ENST00000395860 MED16Q9Y2X0 877 aa20.21■□□□□ 0.83
VCPKMT-202ENST00000395860 DOCK9Q9BZ29 2069 aa20.21■□□□□ 0.83
VCPKMT-202ENST00000395860 CFAP99D6REC4 459 aa20.2■□□□□ 0.82
VCPKMT-202ENST00000395860 INPP4BO15327 924 aa20.2■□□□□ 0.82
VCPKMT-202ENST00000395860 RNGTTO60942 597 aaKnown RBP20.2■□□□□ 0.82
VCPKMT-202ENST00000395860 KLHL2O95198 593 aa20.2■□□□□ 0.82
VCPKMT-202ENST00000395860 CCDC166P0CW27 439 aa20.2■□□□□ 0.82
VCPKMT-202ENST00000395860 RALBP11234 206 aa20.2■□□□□ 0.82
VCPKMT-202ENST00000395860 MSH3P20585 1137 aa20.2■□□□□ 0.82
VCPKMT-202ENST00000395860 CD9P21926 228 aa20.2■□□□□ 0.82
VCPKMT-202ENST00000395860 TPMTP51580 245 aa20.2■□□□□ 0.82
VCPKMT-202ENST00000395860 IRX4P78413 519 aa20.2■□□□□ 0.82
VCPKMT-202ENST00000395860 B4GALNT1Q00973 533 aa20.2■□□□□ 0.82
VCPKMT-202ENST00000395860 GAS6Q14393 721 aa20.2■□□□□ 0.82
VCPKMT-202ENST00000395860 CSHL1Q14406 222 aa20.2■□□□□ 0.82
VCPKMT-202ENST00000395860 LDLRAP1Q5SW96 308 aa20.2■□□□□ 0.82
VCPKMT-202ENST00000395860 UGT3A1Q6NUS8 523 aa20.2■□□□□ 0.82
VCPKMT-202ENST00000395860 MACC1Q6ZN28 852 aa20.2■□□□□ 0.82
VCPKMT-202ENST00000395860 GJD3Q8N144 294 aa20.2■□□□□ 0.82
VCPKMT-202ENST00000395860 PELI3Q8N2H9 469 aa20.2■□□□□ 0.82
VCPKMT-202ENST00000395860 NAT14Q8WUY8 206 aa20.2■□□□□ 0.82
VCPKMT-202ENST00000395860 HEXDCQ8WVB3 486 aa20.2■□□□□ 0.82
VCPKMT-202ENST00000395860 NXNL1Q96CM4 212 aa20.2■□□□□ 0.82
VCPKMT-202ENST00000395860 SYTL2Q9HCH5 934 aa20.2■□□□□ 0.82
VCPKMT-202ENST00000395860 CD93Q9NPY3 652 aa20.2■□□□□ 0.82
VCPKMT-202ENST00000395860 TRMT6Q9UJA5 497 aaKnown RBP20.2■□□□□ 0.82
VCPKMT-202ENST00000395860 A0A1W2PQU0 124 aa20.19■□□□□ 0.82
VCPKMT-202ENST00000395860 IQCF5A8MTL0 148 aa20.19■□□□□ 0.82
VCPKMT-202ENST00000395860 K7ESM1 405 aa20.19■□□□□ 0.82
VCPKMT-202ENST00000395860 MTX2O75431 263 aa20.19■□□□□ 0.82
VCPKMT-202ENST00000395860 WISP3O95389 354 aaPredicted RBP20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms