RNA–Protein interactions for RNA: ENST00000395761.3

CXCL1-201, Transcript of C-X-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL1, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-201ENST00000395761 RANBP9Q96S59 729 aa16.37■□□□□ 0.21
CXCL1-201ENST00000395761 C19orf43Q9BQ61 176 aa16.37■□□□□ 0.21
CXCL1-201ENST00000395761 BOCQ9BWV1 1114 aa16.37■□□□□ 0.21
CXCL1-201ENST00000395761 SPATS2LQ9NUQ6 558 aaKnown RBP16.37■□□□□ 0.21
CXCL1-201ENST00000395761 SIRPGQ9P1W8 387 aa16.37■□□□□ 0.21
CXCL1-201ENST00000395761 APPL1Q9UKG1 709 aa16.37■□□□□ 0.21
CXCL1-201ENST00000395761 GPR34Q9UPC5 381 aa16.37■□□□□ 0.21
CXCL1-201ENST00000395761 SPTBN2O15020 2390 aa16.37■□□□□ 0.21
CXCL1-201ENST00000395761 HEATR9A2RTY3 570 aa16.36■□□□□ 0.21
CXCL1-201ENST00000395761 GOLGA8MH3BSY2 632 aa16.36■□□□□ 0.21
CXCL1-201ENST00000395761 GRID2O43424 1007 aa16.36■□□□□ 0.21
CXCL1-201ENST00000395761 RAD51CO43502 376 aa16.36■□□□□ 0.21
CXCL1-201ENST00000395761 PRSS56P0CW18 603 aa16.36■□□□□ 0.21
CXCL1-201ENST00000395761 CKMT2P17540 419 aa16.36■□□□□ 0.21
CXCL1-201ENST00000395761 IVDP26440 423 aa16.36■□□□□ 0.21
CXCL1-201ENST00000395761 MGAT1P26572 445 aa16.36■□□□□ 0.21
CXCL1-201ENST00000395761 NPY2RP49146 381 aa16.36■□□□□ 0.21
CXCL1-201ENST00000395761 MRPS25P82663 173 aaKnown RBP16.36■□□□□ 0.21
CXCL1-201ENST00000395761 TMEM115Q12893 351 aaPredicted RBP16.36■□□□□ 0.21
CXCL1-201ENST00000395761 NFATC2Q13469 925 aa16.36■□□□□ 0.21
CXCL1-201ENST00000395761 SKIDA1Q1XH10 827 aa16.36■□□□□ 0.21
CXCL1-201ENST00000395761 CCDC157Q569K6 752 aa16.36■□□□□ 0.21
CXCL1-201ENST00000395761 C6orf132Q5T0Z8 1188 aa16.36■□□□□ 0.21
CXCL1-201ENST00000395761 TSTD2Q5T7W7 516 aa16.36■□□□□ 0.21
CXCL1-201ENST00000395761 ZCCHC8Q6NZY4 707 aaKnown RBP16.36■□□□□ 0.21
CXCL1-201ENST00000395761 CRTC3Q6UUV7 619 aa16.36■□□□□ 0.21
CXCL1-201ENST00000395761 CAND1Q86VP6 1230 aaKnown RBP16.36■□□□□ 0.21
CXCL1-201ENST00000395761 JAMLQ86YT9 394 aa16.36■□□□□ 0.21
CXCL1-201ENST00000395761 SDR16C5Q8N3Y7 309 aa16.36■□□□□ 0.21
CXCL1-201ENST00000395761 FAM46DQ8NEK8 389 aa16.36■□□□□ 0.21
CXCL1-201ENST00000395761 OR13J1Q8NGT2 312 aa16.36■□□□□ 0.21
CXCL1-201ENST00000395761 GSDMCQ9BYG8 508 aa16.36■□□□□ 0.21
CXCL1-201ENST00000395761 CHRAC1Q9NRG0 131 aa16.36■□□□□ 0.21
CXCL1-201ENST00000395761 SMOXQ9NWM0 555 aa16.36■□□□□ 0.21
CXCL1-201ENST00000395761 GULP1Q9UBP9 304 aa16.36■□□□□ 0.21
CXCL1-201ENST00000395761 ASIC3Q9UHC3 531 aa16.36■□□□□ 0.21
CXCL1-201ENST00000395761 TCAF1Q9Y4C2 921 aa16.36■□□□□ 0.21
CXCL1-201ENST00000395761 CACNA1AO00555 2505 aa16.36■□□□□ 0.21
CXCL1-201ENST00000395761 COL5A1P20908 1838 aaPredicted RBP16.35■□□□□ 0.21
CXCL1-201ENST00000395761 MED19A0JLT2 244 aaPredicted RBP16.35■□□□□ 0.21
CXCL1-201ENST00000395761 CCDC162PA2VCL2 907 aa16.35■□□□□ 0.21
CXCL1-201ENST00000395761 OR51F1A6NGY5 319 aa16.35■□□□□ 0.21
CXCL1-201ENST00000395761 AGAP14A8MT82 685 aa16.35■□□□□ 0.21
CXCL1-201ENST00000395761 H7C0S8 307 aa16.35■□□□□ 0.21
CXCL1-201ENST00000395761 CHUKO15111 745 aa16.35■□□□□ 0.21
CXCL1-201ENST00000395761 TTI1O43156 1089 aa16.35■□□□□ 0.21
CXCL1-201ENST00000395761 CDK14O94921 469 aa16.35■□□□□ 0.21
CXCL1-201ENST00000395761 CKMT1AP12532 417 aa16.35■□□□□ 0.21
CXCL1-201ENST00000395761 ACADVLP49748 655 aa16.35■□□□□ 0.21
CXCL1-201ENST00000395761 DAB2P98082 770 aa16.35■□□□□ 0.21
CXCL1-201ENST00000395761 ILF3Q12906 894 aaKnown RBP eCLIP16.35■□□□□ 0.21
CXCL1-201ENST00000395761 PCID2Q5JVF3 399 aa16.35■□□□□ 0.21
CXCL1-201ENST00000395761 LDLRAP1Q5SW96 308 aa16.35■□□□□ 0.21
CXCL1-201ENST00000395761 SLC30A9Q6PML9 568 aa16.35■□□□□ 0.21
CXCL1-201ENST00000395761 CHST15Q7LFX5 561 aaPredicted RBP16.35■□□□□ 0.21
CXCL1-201ENST00000395761 SNX20Q7Z614 316 aa16.35■□□□□ 0.21
CXCL1-201ENST00000395761 ZNF547Q8IVP9 402 aa16.35■□□□□ 0.21
CXCL1-201ENST00000395761 SLC35F3Q8IY50 421 aa16.35■□□□□ 0.21
CXCL1-201ENST00000395761 RASGEF1AQ8N9B8 481 aa16.35■□□□□ 0.21
CXCL1-201ENST00000395761 NAT8LQ8N9F0 302 aa16.35■□□□□ 0.21
CXCL1-201ENST00000395761 KYQ8NBH2 561 aa16.35■□□□□ 0.21
CXCL1-201ENST00000395761 MCUQ8NE86 351 aa16.35■□□□□ 0.21
CXCL1-201ENST00000395761 DDHD1Q8NEL9 900 aa16.35■□□□□ 0.21
CXCL1-201ENST00000395761 PPHLN1Q8NEY8 458 aaKnown RBP16.35■□□□□ 0.21
CXCL1-201ENST00000395761 NAT14Q8WUY8 206 aa16.35■□□□□ 0.21
CXCL1-201ENST00000395761 SCG3Q8WXD2 468 aaKnown RBP16.35■□□□□ 0.21
CXCL1-201ENST00000395761 CCDC97Q96F63 343 aaPredicted RBP16.35■□□□□ 0.21
CXCL1-201ENST00000395761 TRIM51Q9BSJ1 452 aa16.35■□□□□ 0.21
CXCL1-201ENST00000395761 LRRC1Q9BTT6 524 aa16.35■□□□□ 0.21
CXCL1-201ENST00000395761 RMI1Q9H9A7 625 aa16.35■□□□□ 0.21
CXCL1-201ENST00000395761 SYBUQ9NX95 663 aa16.35■□□□□ 0.21
CXCL1-201ENST00000395761 BFARQ9NZS9 450 aa16.35■□□□□ 0.21
CXCL1-201ENST00000395761 TAAR2Q9P1P5 351 aa16.35■□□□□ 0.21
CXCL1-201ENST00000395761 SLC23A2Q9UGH3 650 aa16.35■□□□□ 0.21
CXCL1-201ENST00000395761 CRLS1Q9UJA2 301 aa16.35■□□□□ 0.21
CXCL1-201ENST00000395761 SLC30A1Q9Y6M5 507 aa16.35■□□□□ 0.21
CXCL1-201ENST00000395761 EFCAB8A8MWE9 144 aa16.34■□□□□ 0.21
CXCL1-201ENST00000395761 BHMG1C9JSJ3 638 aaPredicted RBP16.34■□□□□ 0.21
CXCL1-201ENST00000395761 VEGFDO43915 354 aa16.34■□□□□ 0.21
CXCL1-201ENST00000395761 DKK1O94907 266 aa16.34■□□□□ 0.21
CXCL1-201ENST00000395761 ACP5P13686 325 aa16.34■□□□□ 0.21
CXCL1-201ENST00000395761 ITGALP20701 1170 aa16.34■□□□□ 0.21
CXCL1-201ENST00000395761 ACTR1BP42025 376 aa16.34■□□□□ 0.21
CXCL1-201ENST00000395761 CTSCP53634 463 aa16.34■□□□□ 0.21
CXCL1-201ENST00000395761 ACTR1AP61163 376 aa16.34■□□□□ 0.21
CXCL1-201ENST00000395761 SARNPP82979 210 aaKnown RBP16.34■□□□□ 0.21
CXCL1-201ENST00000395761 ZRANB3Q5FWF4 1079 aa16.34■□□□□ 0.21
CXCL1-201ENST00000395761 RNASEH2BQ5TBB1 312 aaKnown RBP16.34■□□□□ 0.21
CXCL1-201ENST00000395761 C8orf74Q6P047 294 aa16.34■□□□□ 0.21
CXCL1-201ENST00000395761 ERMP1Q7Z2K6 904 aa16.34■□□□□ 0.21
CXCL1-201ENST00000395761 PIANPQ8IYJ0 282 aa16.34■□□□□ 0.21
CXCL1-201ENST00000395761 NXPE1Q8N323 547 aa16.34■□□□□ 0.21
CXCL1-201ENST00000395761 MPP5Q8N3R9 675 aa16.34■□□□□ 0.21
CXCL1-201ENST00000395761 LRRN4CLQ8ND94 238 aa16.34■□□□□ 0.21
CXCL1-201ENST00000395761 HDAC10Q969S8 669 aa16.34■□□□□ 0.21
CXCL1-201ENST00000395761 ERP44Q9BS26 406 aa16.34■□□□□ 0.21
CXCL1-201ENST00000395761 IL22Q9GZX6 179 aa16.34■□□□□ 0.21
CXCL1-201ENST00000395761 DPEP2Q9H4A9 486 aa16.34■□□□□ 0.21
CXCL1-201ENST00000395761 RIMKLBQ9ULI2 386 aa16.34■□□□□ 0.21
CXCL1-201ENST00000395761 KCNK6Q9Y257 313 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms