RNA–Protein interactions for RNA: ENST00000394597.6

RFFL-202, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFFL, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-202ENST00000394597 GALNT12Q8IXK2 581 aa5.66□□□□□ -1.5
RFFL-202ENST00000394597 C8orf59Q8N0T1 100 aaPredicted RBP5.66□□□□□ -1.5
RFFL-202ENST00000394597 KREMEN2Q8NCW0 462 aa5.66□□□□□ -1.5
RFFL-202ENST00000394597 OR7G1Q8NGA0 311 aa5.66□□□□□ -1.5
RFFL-202ENST00000394597 KLHL5Q96PQ7 755 aa5.66□□□□□ -1.5
RFFL-202ENST00000394597 TCF25Q9BQ70 676 aa5.66□□□□□ -1.5
RFFL-202ENST00000394597 ADI1Q9BV57 179 aa5.66□□□□□ -1.5
RFFL-202ENST00000394597 UCKL1Q9NWZ5 548 aa5.66□□□□□ -1.5
RFFL-202ENST00000394597 KIF17Q9P2E2 1029 aa5.66□□□□□ -1.5
RFFL-202ENST00000394597 PSME2Q9UL46 239 aa5.66□□□□□ -1.5
RFFL-202ENST00000394597 IFT52Q9Y366 437 aa5.66□□□□□ -1.5
RFFL-202ENST00000394597 TNFRSF10AO00220 468 aa5.66□□□□□ -1.5
RFFL-202ENST00000394597 SH3BP5O60239 455 aa5.66□□□□□ -1.5
RFFL-202ENST00000394597 VPS26AO75436 327 aa5.66□□□□□ -1.5
RFFL-202ENST00000394597 DBTP11182 482 aaKnown RBP5.66□□□□□ -1.5
RFFL-202ENST00000394597 PTPN2P17706 415 aa5.66□□□□□ -1.5
RFFL-202ENST00000394597 XRCC1P18887 633 aaPredicted RBP5.66□□□□□ -1.5
RFFL-202ENST00000394597 ATP6V1B2P21281 511 aa5.66□□□□□ -1.5
RFFL-202ENST00000394597 PTPN3P26045 913 aa5.66□□□□□ -1.5
RFFL-202ENST00000394597 GRIA2P42262 883 aa5.66□□□□□ -1.5
RFFL-202ENST00000394597 NR4A2P43354 598 aa5.66□□□□□ -1.5
RFFL-202ENST00000394597 BNC1Q01954 994 aa5.66□□□□□ -1.5
RFFL-202ENST00000394597 MGAT3Q09327 533 aa5.66□□□□□ -1.5
RFFL-202ENST00000394597 HNRNPDQ14103 355 aaKnown RBP5.66□□□□□ -1.5
RFFL-202ENST00000394597 IMPG1Q17R60 797 aa5.66□□□□□ -1.5
RFFL-202ENST00000394597 GPR158Q5T848 1215 aa5.66□□□□□ -1.5
RFFL-202ENST00000394597 NEPROQ6NW34 567 aa5.66□□□□□ -1.5
RFFL-202ENST00000394597 FAM171BQ6P995 826 aa5.66□□□□□ -1.5
RFFL-202ENST00000394597 OTOP3Q7RTS5 596 aa5.66□□□□□ -1.5
RFFL-202ENST00000394597 ANKS1BQ7Z6G8 1248 aa5.66□□□□□ -1.5
RFFL-202ENST00000394597 METTL3Q86U44 580 aaKnown RBP5.66□□□□□ -1.5
RFFL-202ENST00000394597 ZC3H7AQ8IWR0 971 aaKnown RBP5.66□□□□□ -1.5
RFFL-202ENST00000394597 RAVER1Q8IY67 606 aaKnown RBP5.66□□□□□ -1.5
RFFL-202ENST00000394597 PQLC3Q8N755 202 aa5.66□□□□□ -1.5
RFFL-202ENST00000394597 FBXO27Q8NI29 283 aa5.66□□□□□ -1.5
RFFL-202ENST00000394597 ZNF420Q8TAQ5 688 aaPredicted RBP5.66□□□□□ -1.5
RFFL-202ENST00000394597 TBATAQ96M53 351 aa5.66□□□□□ -1.5
RFFL-202ENST00000394597 TOX2Q96NM4 488 aa5.66□□□□□ -1.5
RFFL-202ENST00000394597 SLC39A8Q9C0K1 460 aa5.66□□□□□ -1.5
RFFL-202ENST00000394597 MAGEH1Q9H213 219 aa5.66□□□□□ -1.5
RFFL-202ENST00000394597 ZNF395Q9H8N7 513 aaPredicted RBP5.66□□□□□ -1.5
RFFL-202ENST00000394597 SYTL2Q9HCH5 934 aa5.66□□□□□ -1.5
RFFL-202ENST00000394597 CCDC177Q9NQR7 707 aaPredicted RBP5.66□□□□□ -1.5
RFFL-202ENST00000394597 CCDC59Q9P031 241 aaKnown RBP5.66□□□□□ -1.5
RFFL-202ENST00000394597 CFAP97Q9P2B7 532 aa5.66□□□□□ -1.5
RFFL-202ENST00000394597 TRMT6Q9UJA5 497 aaKnown RBP5.66□□□□□ -1.5
RFFL-202ENST00000394597 ERGIC3Q9Y282 383 aa5.66□□□□□ -1.5
RFFL-202ENST00000394597 YIPF1Q9Y548 306 aa5.66□□□□□ -1.5
RFFL-202ENST00000394597 SPO11Q9Y5K1 396 aa5.66□□□□□ -1.5
RFFL-202ENST00000394597 CEPT1Q9Y6K0 416 aa5.66□□□□□ -1.5
RFFL-202ENST00000394597 A0A088AWK7 358 aa5.65□□□□□ -1.5
RFFL-202ENST00000394597 ANKRD34BA5PLL1 514 aa5.65□□□□□ -1.5
RFFL-202ENST00000394597 SLCO1B7G3V0H7 640 aa5.65□□□□□ -1.5
RFFL-202ENST00000394597 AGRPO00253 132 aa5.65□□□□□ -1.5
RFFL-202ENST00000394597 BTN3A3O00478 584 aa5.65□□□□□ -1.5
RFFL-202ENST00000394597 CCL16O15467 120 aa5.65□□□□□ -1.5
RFFL-202ENST00000394597 AQP9O43315 295 aa5.65□□□□□ -1.5
RFFL-202ENST00000394597 TRIM13O60858 407 aa5.65□□□□□ -1.5
RFFL-202ENST00000394597 AP2A1O95782 977 aa5.65□□□□□ -1.5
RFFL-202ENST00000394597 MT-CO1P00395 513 aa5.65□□□□□ -1.5
RFFL-202ENST00000394597 FUCA1P04066 466 aa5.65□□□□□ -1.5
RFFL-202ENST00000394597 C8AP07357 584 aa5.65□□□□□ -1.5
RFFL-202ENST00000394597 ITGALP20701 1170 aa5.65□□□□□ -1.5
RFFL-202ENST00000394597 EPHA3P29320 983 aa5.65□□□□□ -1.5
RFFL-202ENST00000394597 RCVRNP35243 200 aa5.65□□□□□ -1.5
RFFL-202ENST00000394597 MAPK8P45983 427 aa5.65□□□□□ -1.5
RFFL-202ENST00000394597 LBX1P52954 281 aa5.65□□□□□ -1.5
RFFL-202ENST00000394597 CDK18Q07002 472 aa5.65□□□□□ -1.5
RFFL-202ENST00000394597 ZNF252P-AS1Q0IIN9 211 aa5.65□□□□□ -1.5
RFFL-202ENST00000394597 CCNIQ14094 377 aa5.65□□□□□ -1.5
RFFL-202ENST00000394597 PAFAH1B3Q15102 231 aaKnown RBP5.65□□□□□ -1.5
RFFL-202ENST00000394597 FUT11Q495W5 492 aa5.65□□□□□ -1.5
RFFL-202ENST00000394597 MPPE1Q53F39 396 aa5.65□□□□□ -1.5
RFFL-202ENST00000394597 TNFAIP8L3Q5GJ75 292 aa5.65□□□□□ -1.5
RFFL-202ENST00000394597 FGD3Q5JSP0 725 aa5.65□□□□□ -1.5
RFFL-202ENST00000394597 ATAD3BQ5T9A4 648 aa5.65□□□□□ -1.5
RFFL-202ENST00000394597 UBE2UQ5VVX9 321 aa5.65□□□□□ -1.5
RFFL-202ENST00000394597 DENND5AQ6IQ26 1287 aa5.65□□□□□ -1.5
RFFL-202ENST00000394597 ZNF544Q6NX49 715 aa5.65□□□□□ -1.5
RFFL-202ENST00000394597 BORAQ6PGQ7 559 aa5.65□□□□□ -1.5
RFFL-202ENST00000394597 GLT6D1Q7Z4J2 308 aa5.65□□□□□ -1.5
RFFL-202ENST00000394597 RBM23Q86U06 439 aaKnown RBP5.65□□□□□ -1.5
RFFL-202ENST00000394597 FAM126BQ8IXS8 530 aa5.65□□□□□ -1.5
RFFL-202ENST00000394597 AMER2Q8N7J2 671 aa5.65□□□□□ -1.5
RFFL-202ENST00000394597 ARL14EPQ8N8R7 260 aaPredicted RBP5.65□□□□□ -1.5
RFFL-202ENST00000394597 KCTD4Q8WVF5 259 aa5.65□□□□□ -1.5
RFFL-202ENST00000394597 ULK4Q96C45 1275 aa5.65□□□□□ -1.5
RFFL-202ENST00000394597 TEKT5Q96M29 485 aa5.65□□□□□ -1.5
RFFL-202ENST00000394597 TMEM246Q9BRR3 403 aa5.65□□□□□ -1.5
RFFL-202ENST00000394597 CXCL16Q9H2A7 254 aa5.65□□□□□ -1.5
RFFL-202ENST00000394597 TP63Q9H3D4 680 aaPredicted RBP5.65□□□□□ -1.5
RFFL-202ENST00000394597 TMPRSS4Q9NRS4 437 aa5.65□□□□□ -1.5
RFFL-202ENST00000394597 INIPQ9NRY2 104 aa5.65□□□□□ -1.5
RFFL-202ENST00000394597 FKBP14Q9NWM8 211 aa5.65□□□□□ -1.5
RFFL-202ENST00000394597 ZNF224Q9NZL3 707 aa5.65□□□□□ -1.5
RFFL-202ENST00000394597 KIAA1522Q9P206 1035 aaPredicted RBP5.65□□□□□ -1.5
RFFL-202ENST00000394597 TSR3Q9UJK0 312 aaKnown RBP5.65□□□□□ -1.5
RFFL-202ENST00000394597 POU2F3Q9UKI9 436 aa5.65□□□□□ -1.5
RFFL-202ENST00000394597 URB1O60287 2271 aaKnown RBP5.65□□□□□ -1.5
RFFL-202ENST00000394597 A0A096LPK6 155 aa5.65□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms